prot_H-paniculata_contig6289.14053.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6289.14053.1
Unique Nameprot_H-paniculata_contig6289.14053.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length70
Homology
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BLAST of mRNA_H-paniculata_contig6289.14053.1 vs. uniprot
Match: D8LSF6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSF6_ECTSI)

HSP 1 Score: 51.2 bits (121), Expect = 9.420e-6
Identity = 34/73 (46.58%), Postives = 41/73 (56.16%), Query Frame = 0 
Query:    1 EQAAEVLDCFDPRRDGCIRYEDFLRAVEED-----RHSPYKSHNKTPDRDGRVNAVGRTTERERLASTLRRAV 68
            E+AAE+LD FDP  DG IRYEDFLR +EE      R SP     K  D  G       T+ R RL ++L RA+
Sbjct:  448 EEAAEILDRFDPHGDGNIRYEDFLREIEEGEGDHVRRSPSPRGRKAFDGGG-------TSGRGRLQASLSRAI 513
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6289.14053.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSF6_ECTSI9.420e-646.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002048EF-hand domainPROSITEPS50222EF_HAND_2coord: 1..33
score: 8.683

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6289contigH-paniculata_contig6289:3095..3747 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6289.14053.1mRNA_H-paniculata_contig6289.14053.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6289 3093..3747 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6289.14053.1 ID=prot_H-paniculata_contig6289.14053.1|Name=mRNA_H-paniculata_contig6289.14053.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=70bp
EQAAEVLDCFDPRRDGCIRYEDFLRAVEEDRHSPYKSHNKTPDRDGRVNA
VGRTTERERLASTLRRAVAH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002048EF_hand_dom