mRNA_H-paniculata_contig6285.14048.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Match: D7G1X7_ECTSI (Major facilitator superfamily permease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X7_ECTSI) HSP 1 Score: 338 bits (866), Expect = 8.150e-100 Identity = 200/353 (56.66%), Postives = 233/353 (66.01%), Query Frame = 1
Query: 1 QVGMIMAAYPAVNLITSPLVSFLLNRYGRVNALLTGLVTLAVATMLYGAAQSVFWLFVASGLHGTSLSLIHISSLALLSAFPDRITEGMAGIEVWSGVALVLGPPLGGLAHPFGGVSSVFMLMATFPLVMLLFAPRMRHLARSSKDDFGELGSKKPASFWKVARSRGVLTGAFVTAYNYGINGFLEATLAPHLALTLSTSPSSIGFVFILPNVLYTVMAAKAEDIVDRVGVKKTLLYGLGIMAVSVLLLGPSPALAPVLMTRAAAKGSIGLGLLAFQVGTALATVPAFTVMQASVAGMGKGGDNMVASAHSLAIGVGEVIGPVLGGMMVELLPQSPAMACEPGPWALDLGDPV 1059
QVGMIMAAYPAVNL SPLV +++ RYGR +L GL+ L VAT LYG A SV WL++ASGLHG SLS IH+SSL LLSA+PDR+TE MAGIE G L P G LA FWKVAR+RGVLTGAFVTAYNY + GFLE TLAPHLA TLSTSP SIGFV +LPNVLYT+ A KAEDIVDR G ++TLL GL IM++S+L+ GPSPALAP L+TR AA+G+I +GLLAFQ G VAGMG G D+MVASAH+++IGVGEVIGP++GG +VELLP SPA ACEP + L DP+
Sbjct: 24 QVGMIMAAYPAVNLAASPLVGWVMYRYGRWKSLFAGLLLLTVATALYGLASSVPWLYIASGLHGASLSFIHVSSLGLLSAYPDRLTESMAGIEASEGGFGDLNPAGGKLA------------------------------------------------FWKVARNRGVLTGAFVTAYNYAVIGFLEVTLAPHLAQTLSTSPRSIGFVLVLPNVLYTLTAMKAEDIVDRQGARRTLLAGLCIMSMSLLMSGPSPALAPALVTRGAARGAISVGLLAFQGG---------------VAGMGTGADDMVASAHAMSIGVGEVIGPMIGGFVVELLPTSPAFACEPDVPIVQLHDPI 313
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Match: A0A836CL52_9STRA (Major facilitator superfamily domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CL52_9STRA) HSP 1 Score: 335 bits (860), Expect = 2.190e-95 Identity = 187/372 (50.27%), Postives = 251/372 (67.47%), Query Frame = 1
Query: 1 QVGMIMAAYPAVNLITSPLVSFLLNRYGRVNALLTGLVTLAVATMLYGAAQSVFWLFVASGLHGTSLSLIHISSLALLSAFPDRITEGMAGIEVWSGVALVLGPPLGGLAHPFGGVSSVFMLMATFPLVMLLFAPRMRHL-------------ARSSKDDFGELGSKKPASFWK-----------------VARSRGVLTGAFVTAYNYGINGFLEATLAPHLALTLSTSPSSIGFVFILPNVLYTVMAAKAEDIVDRVGVKKTLLYGLGIMAVSVLLLGPSPALAPVLMTRAAAKGSIGLGLLAFQVGTALATVPAFTVMQASVAGMGKGGDNMVASAHSLAIGVGEVIGPVLGGMMVELLPQSPAMACEP 1026
QVG+IMA YPA NL+ SP V ++ NR GR N L+ GL L AT LYGAA SV L +AS LHGTSLSLIH+SSL+LLS+FP R+TEGMAGIE+WSGV LVLGPPLGG +P+ GV VF+ ++ PL++L+ P MR A+ + D S A VAR+RGVL GA VTA N+G+ GFLEATL+PHLA L T+P S+GF+FI+P++ Y++MAAK E +V+ G ++T+L+G ++++S+ L GP+PAL V ++ AA +G+I G+L FQVG+A+A VPAF +MQ VA +G+G D++VA HSLAIG+GEV+GP+LGG M+E+ Q+ +C P
Sbjct: 571 QVGIIMAVYPAFNLLASPWVGYVANRAGRWNMLMAGLALLTCATALYGAAPSVAALQLASALHGTSLSLIHVSSLSLLSSFPARLTEGMAGIEIWSGVGLVLGPPLGGCLYPYVGVPGVFVCLSVLPLLLLVAMPAMRLSWPVEARIKPQPGGAKCAMRDNAVAASAAVAXXXXXXXXXXXXXXXXXPLAAVARARGVLAGALVTAANFGLIGFLEATLSPHLAQALQTTPQSVGFIFIVPSITYSLMAAKTERVVEGFGARRTMLFGFAVLSISLFLFGPAPALDAVGLSPAAVRGAIAAGMLIFQVGSAMACVPAFAIMQGGVAHLGRGADSIVAGVHSLAIGMGEVVGPLLGGFMMEMGRQTRVASCIP 942
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Match: A0A6H5KR06_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR06_9PHAE) HSP 1 Score: 133 bits (334), Expect = 6.470e-33 Identity = 69/105 (65.71%), Postives = 83/105 (79.05%), Query Frame = 1
Query: 418 LARSSKDDFGELG-SKKPASFWKVARSRGVLTGAFVTAYNYGINGFLEATLAPHLALTLSTSPSSIGFVFILPNVLYTVMAAKAEDIVDRVGVKKTLLYGLGIMA 729
L +S++ FG++ + +FWKVAR+RGVLTGAFVTAYNY + GFLE TLAPHLA TLSTSP SIGF +LPNVLYT+ A KAEDIVDR G ++TLL GL IM+
Sbjct: 3 LCWASQEGFGDINPAGGTLAFWKVARNRGVLTGAFVTAYNYAVIGFLEVTLAPHLAQTLSTSPRSIGFALVLPNVLYTLTAMKAEDIVDRQGARRTLLAGLCIMS 107
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Match: A0A6H5KRN1_9PHAE (MFS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRN1_9PHAE) HSP 1 Score: 130 bits (326), Expect = 3.560e-31 Identity = 66/93 (70.97%), Postives = 76/93 (81.72%), Query Frame = 1
Query: 1 QVGMIMAAYPAVNLITSPLVSFLLNRYGRVNALLTGLVTLAVATMLYGAAQSVFWLFVASGLHGTSLSLIHISSLALLSAFPDRITEGMAGIE 279
QVGMIMAAYPAVNL SPLV +++NRYGR +L GL+ L VAT LYG A SV WL++ASGLHG SLS IH+SSL LLSA+PDR+TE MAGIE
Sbjct: 64 QVGMIMAAYPAVNLAASPLVGWVMNRYGRWKSLFAGLLLLTVATALYGLASSVTWLYIASGLHGASLSFIHVSSLGLLSAYPDRLTESMAGIE 156
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Match: A0A6H5KPD6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD6_9PHAE) HSP 1 Score: 109 bits (273), Expect = 2.130e-21 Identity = 62/109 (56.88%), Postives = 78/109 (71.56%), Query Frame = 1
Query: 733 SVLLLGPSPALAPVLMTRAAAKGSIGLGLLAFQVGTALATVPAFTVMQASVAGMGKGGDNMVASAHSLAIGVGEVIGPVLGGMMVELLPQSPAMACEPGPWALDLGDPV 1059
S+L+ GPSPALAP L+TR AA+G+I +GLLAFQ G VAGMG G D+MVASAH+++IGVGEVIGP++GG +V+LLP SPA ACEP + L DP+
Sbjct: 7 SLLMAGPSPALAPALVTRGAARGAISVGLLAFQGG---------------VAGMGTGADDMVASAHAMSIGVGEVIGPMIGGFVVDLLPTSPAFACEPNVPIVQLHDPI 100
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Match: UPI001D05F006 (MFS-type transporter SLC18B1-like isoform X1 n=2 Tax=Chrysoperla carnea TaxID=189513 RepID=UPI001D05F006) HSP 1 Score: 95.5 bits (236), Expect = 1.450e-16 Identity = 95/341 (27.86%), Postives = 161/341 (47.21%), Query Frame = 1
Query: 7 GMIMAAYPAVNLITSPLVSFLLNRYGRVNALLTGLVTLAVATMLYGAAQSV-------FWLFVASGLHGTSLSLIHISSLA-LLSAFPDRITEGMAGIEVWSGVALVLGPPLGGLAHPFGGVSSVFMLMATFPLVMLLFAPRMRHLARSSKDDFGELGSKKPASFWKVARSRGVLTGAFVTAYNYGINGFLEATLAPHLALTLSTSPSSIGFVFILPNVLYTVMAAKAEDIVDRVGVKKTLLY-GLGIMAVSVLLLGPSPALAPVLMTRAAAKGSIGLGLLAFQVGTALATVPAFTVMQASVAGMGKGGD----NMVASAHSLAIGVGEVIGPVLGGMMVE 990
G + + Y + I+SP+ +L R G ++G+ + +++G + + FV G+ S +S +++ FP+ I + +E + G+ + GP +GGL + GG F ++ ++M+ P +L S+ D +GSK +S + + + VL FV GFL+ TL PHL L SP IG +F+L + LY + + + D+ +++ GL + +LLLGPSP L+P L R+ IGL +L V AL +P F + +S G ++VA S +GEV+GP LGG+++E
Sbjct: 132 GFVFSFYAFIMFISSPVFGKILPRVGAKVLFMSGMFLAGICNLIFGLLEFIDNYDLFATCCFVIRGMEALGASAYSTASYVFVVNTFPNSIGSVLGILETFVGLGMSTGPAIGGLLYSLGGFGLPFYVLG---ILMVAVVPINFYLLPSA--DECNMGSKT-SSIFDLLKLPSVLVTGFVVIIVSNTWGFLDPTLEPHLR-GLHLSPEKIGLIFLLFSALYGISSPAWGWLADKCNNHWSMMVIGLLLCTSGLLLLGPSPYLSPFL-DRSIWLDLIGLSILGISV--ALTLLPTFQRVLSSAVEGGFPDSLSTCSLVAGLWSCMYALGEVLGPALGGILLE 462
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Match: A0A6M2DGC2_9NEOP (Putative vesicular amine transporter (Fragment) n=4 Tax=Pulicidae TaxID=7511 RepID=A0A6M2DGC2_9NEOP) HSP 1 Score: 94.7 bits (234), Expect = 2.730e-16 Identity = 100/346 (28.90%), Postives = 159/346 (45.95%), Query Frame = 1
Query: 1 QVGMIMAAYPAVNLITSPLVSFLLNRYGRVNALLTGLVTLAVATMLYGAAQSV-------FWLFVASGLHGTSLSLIHISSLA-LLSAFPDRITEGMAGIEVWSGVALVLGPPLGGLAHPFGGVSSVFMLMATFPLVMLLFAPRMRHLARSSKDDFGELGSKKPASFWKVARSRGVLTGAFVTAYNYGINGFLEATLAPHLALTLSTSPSSIGFVFILPNVLYTVMAAKAEDIVDRVGVKKTLLY-GLGIMAVSVLLLGPSPALAPVLMTRAAAKGSIGLGLLAFQV---GTALATVPAF--TVMQASVAGMGKGGD--NMVASAHSLAIGVGEVIGPVLGGMMVE 990
+ G++ + Y + SPL LL R G L GL ++L+G + V + F+ GL S +S +++ FPD I + +E + G+ + +GP +GG + GG F + L+ LL P L + +D G+ + KP S +A GVL V GFL+ TL PHL S S +G +F+L + LY + ++ + D+ ++++ GL + + +LLLGPSP L P+ + S+ L L + + ALA +P F +M A AG ++VA S +GEVIGP LGG ++E
Sbjct: 149 ETGLVFSFYALIMFAASPLFGKLLPRIGARFLFLAGLFIAGGCSLLFGVLEYVEDRKLFKIFCFLVRGLEALGASAYSTASYVYVVACFPDNIGTVLGLLETFVGLGMSMGPAIGGFLYSLGGFGLPFYAVG---LLTLLVVPVTMWLLPQN-NDLGK--TSKPGSLLVLAYCPGVLMTGLVVVVASSAWGFLDPTLEPHLR-QFSLSAKQVGLIFLLFSSLYAISSSFWGWLADKCNNHWSMMFSGLLLCTLGLLLLGPSPIL-PL-------ESSLWLNLTSLSILGISIALALLPTFQSVLMFALDAGCPDSVSTYSVVAGLWSCMYSLGEVIGPTLGGTLLE 479
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Match: A0A6L2Q6R8_COPFO (MFS domain-containing protein n=1 Tax=Coptotermes formosanus TaxID=36987 RepID=A0A6L2Q6R8_COPFO) HSP 1 Score: 92.4 bits (228), Expect = 1.520e-15 Identity = 95/341 (27.86%), Postives = 152/341 (44.57%), Query Frame = 1
Query: 7 GMIMAAYPAVNLITSPLVSFLLNRYGRVNALLTGLVTLAVATMLYGAAQSV-------FWLFVASGLHGTSLSLIHISSLA-LLSAFPDRITEGMAGIEVWSGVALVLGPPLGGLAHPFGGVSSVFMLMATFPLVMLLFAPRMRHLARSSKDDFGELGSKKPASFWKVARSRGVLTGAFVTAYNYGINGFLEATLAPHLALTLSTSPSSIGFVFILPNVLYTVMAAKAEDIVDRVGVKKTLL-YGLGIMAVSVLLLGPSPALAPVLMTRAAAKGSIGLGLLAFQVGTALATVPAFTVMQASVAGMGKGGD----NMVASAHSLAIGVGEVIGPVLGGMMVE 990
G++ + Y V ++SPL +L R G ++G+ +L+G + + F+ G+ S +S ++ FPD I + +E + G+ + +GP LGG+ GG F T ++M+ P L S E KK S ++ + V+ + V I GFL+ TL PHL SP IG +F+L + LY V + + DR +++ +GL I + +LLLGPSP L +T + L +L V AL +P F + S G D ++VA S +GEVIGP +GG+++E
Sbjct: 160 GLVFSFYALVMFVSSPLFGKILPRVGAKFLFMSGMFVAGSCNLLFGMLAYIENFPTFAAYCFLVRGMEALGASAYATASYVFVVDIFPDNIGSVLGILETFVGLGMSIGPALGGILFSVGGFGLPFY---TLGVLMVTIMPVNLCLLPSGDARNVE---KKTGSLLELIQVPSVIMISLVIVVISNIWGFLDPTLEPHLR-EFQLSPEHIGLIFLLFSALYGVFSPIWGYLADRCNNHWSMMVWGLLICTIGLLLLGPSPLLP--FLTNTIWLNLVALSILGISV--ALTLLPTFQAVLESAIEGGCADDLSTYSLVAGVWSCMYSLGEVIGPSVGGVLLE 489
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Match: UPI0006D54329 (MFS transporter n=1 Tax=Numidum massiliense TaxID=1522315 RepID=UPI0006D54329) HSP 1 Score: 90.5 bits (223), Expect = 1.740e-15 Identity = 92/334 (27.54%), Postives = 158/334 (47.31%), Query Frame = 1
Query: 1 QVGMIMAAYPAVNLITSPLVSFLLNRYGRVNALLTGLVTLAVATMLYGAAQSVFWLFVASGLHGTSLSLIHISSLALLS-AFPDRITEGMAGIEVWSGVAL--VLGPPLGGLAHPFGGVSSVFMLMATFPLVMLLFAPRMRHLARSSKDDFGELGSKKPASFWKVARSRGVLTGAFVTAYNYGINGFLEATLAPHLALTLSTSPSSIGFVFILPNVLYTVMAAKAEDIVDRVGVKKTLLYGLGIMAVSVLLLGPSPALAPVLMTRAAAKGSIGLGLLAFQVGTALATVPAFTVMQASVAGMGKGGDNMVASAHSLAIGVGEVIGPVLGGMMVEL 993
+G++ ++Y ++T+P + L +R GR ++ GL+ +A++T+++ A ++WL A + G + + ++SLALL+ FP + G + +G++ +LG P+GG GG + F+ A +V+L+ A K+D E G+ + R+ +L A V I LE L L ++S + IG +F V Y ++ A + DR +L GL ++ V + LL LA + AA +G L G ALA P + + V G G V S +L+ GV ++GP+LGG +V+L
Sbjct: 43 MIGVLFSSYAVGLMVTTPFLGSLTDRIGRKKPIVFGLIGMALSTVMFAFAFDMYWLIAARFVQGVAGASAWVASLALLADLFPTHMRGAAMGTAL-TGISTGTLLGAPVGGWLMEIGGFLAPFIFSAILSVVILIVVLLFLPTAPIKKNDNKEGGALS------LLRNPAILFVASVIVAGQIILCALEPILPMFLEQRFTSSAALIGMMFGAATVGYAAISPVAGALADRYNPYALMLIGLSVLVVGLPLL----TLARTVWQEVAAIALVGTSL-----GFALA--PTLSTLGKIVDRTGIGSYGAVYSLFNLSEGVAIIVGPLLGGRLVDL 358
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Match: UPI001C0FA872 (MFS transporter n=1 Tax=unclassified Paenibacillus TaxID=185978 RepID=UPI001C0FA872) HSP 1 Score: 89.4 bits (220), Expect = 4.310e-15 Identity = 89/335 (26.57%), Postives = 153/335 (45.67%), Query Frame = 1
Query: 7 GMIMAAYPAVNLITSPLVSFLLNRYGRVNALLTGLVTLAVATMLYGAAQSVFWLFVASGLHGTSLSLIHISSLALLSAFPDRITEGMAGIEVWSGVAL--VLGPPLGGLAHPFGGVSSVFMLMATFPL---VMLLFAPRMRHLARSSKDDFGELGSKKPASFWKVARSRGVLTGAFVTAYNYGINGFLEATLAPHLALTLSTSPSSIGFVFILPNVLYTVMAAKAEDIVDRVGVKKTLLYGLGIMAVSVLLLGPSPALAPVLMTRAAAKGSIGLGLLAFQVGTALATVPAFTVMQASVAGMGKGGDNMVASAHSLAIGVGEVIGPVLGGMMVELL 996
G++ +Y L +P L +R GR LL GL+ LA++T+L+ A S+F L A + G + + ++LAL++ + + G +G++ +LG P+GG GG + F+ A L V++LF + G+ + + S + + R+R VL A V +E TL L L SP ++G +F + Y V+A + + DR + +L GLG +AV++ L+ S + V + A GS+G L P + V G G + S ++ VG +IGP++GG++ ++L
Sbjct: 51 GVLFGSYAVAMLAATPFFGKLSDRIGRRKPLLLGLIGLALSTVLFMFAGSMFMLIAARFIQGIAAAATWTAALALVADLFPQASRGKVMGFALTGISTGSLLGAPVGGWLFEAGGHMTPFVTAAGLTLLNFVLVLFLLQE-----------GKRAASEQTSLFSLLRNRSVLYIAIVILLAESCLTLMEPTLPVFLTEHLLLSPLALGLLFGAMTLAYGVVAPVSGSLADRYNPRILMLIGLGCLAVTMPLIVVSQNIWQVAIAGLLAGGSVGFAL-----------SPTLPTLGQIVDRDGSGSYGVAYSLFNMFHAVGMIIGPLVGGVLTDML 363 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6285.14048.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6285.14048.1 >prot_H-paniculata_contig6285.14048.1 ID=prot_H-paniculata_contig6285.14048.1|Name=mRNA_H-paniculata_contig6285.14048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=588bp MIMAAYPAVNLITSPLVSFLLNRYGRVNALLTGLVTLAVATMLYGAAQSVback to top mRNA from alignment at H-paniculata_contig6285:1525..10000+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6285.14048.1 ID=mRNA_H-paniculata_contig6285.14048.1|Name=mRNA_H-paniculata_contig6285.14048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8476bp|location=Sequence derived from alignment at H-paniculata_contig6285:1525..10000+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6285:1525..10000+ >mRNA_H-paniculata_contig6285.14048.1 ID=mRNA_H-paniculata_contig6285.14048.1|Name=mRNA_H-paniculata_contig6285.14048.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3528bp|location=Sequence derived from alignment at H-paniculata_contig6285:1525..10000+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |