prot_H-paniculata_contig628.14042.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig628.14042.1
Unique Nameprot_H-paniculata_contig628.14042.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length151
Homology
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BLAST of mRNA_H-paniculata_contig628.14042.1 vs. uniprot
Match: D8LEC6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEC6_ECTSI)

HSP 1 Score: 159 bits (403), Expect = 2.610e-47
Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 0 
Query:   51 GTVVDEEVLISFKPSEVEVVCKPGEVALEVAQRCSGMVEDNKNPFCRDGGCYNCEVEVVEATELGLEDNLVRACMFKVPEGAKKITLIQMSSDEAFEDMV 150
            G   + ++L++FKPSEVEV CKPGEVAL+VA RCSGM ED+K PFCRDGGCYNCEVEVVEA ELG+ DNLVRAC FK+P  AK++TLIQM+S+EAFEDM+
Sbjct:   64 GGAEEGDILLTFKPSEVEVTCKPGEVALDVASRCSGMPEDSKAPFCRDGGCYNCEVEVVEAAELGIVDNLVRACQFKIPAEAKQLTLIQMTSEEAFEDML 163
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BLAST of mRNA_H-paniculata_contig628.14042.1 vs. uniprot
Match: M2VVV3_GALSU (2Fe-2S iron-sulfur cluster binding domain protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2VVV3_GALSU)

HSP 1 Score: 65.5 bits (158), Expect = 1.080e-10
Identity = 35/101 (34.65%), Postives = 57/101 (56.44%), Query Frame = 0 
Query:   44 MKLETAAGTVVDEEVLISFKPSEVEVVCKPGEVALEVAQRCSGMVEDNKNPFCRDGGCYNCEVEVVEATELGLEDNLVRACMFKVPEGAKKITLIQMSSDE 144
            M L+     +  ++V+I F P  V V  + G+  L+VA +   + E    PFCRDGGCY CE+E   + +L  E  L+R C + VP  +++I L ++ +D+
Sbjct:   35 MTLKHNESNLKSKKVVIRFLPDNVVVQAEVGKRLLDVALQAGQLKEHPLEPFCRDGGCYKCEMET--SNKLFEEYPLIRTCKYTVPVVSEEIQLTKVDNDQ 133
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BLAST of mRNA_H-paniculata_contig628.14042.1 vs. uniprot
Match: A0A7S3EKU6_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3EKU6_9RHOD)

HSP 1 Score: 62.0 bits (149), Expect = 3.530e-9
Identity = 33/102 (32.35%), Postives = 54/102 (52.94%), Query Frame = 0 
Query:   52 TVVDEEVLISFKPSEVEVVCKPGEVALEVAQRCSGMVEDNKNPFCRDGGCYNCEVEVVEATELGLEDNLVRACMFKVPEGA------KKITLIQMSSDEAFE 147
            T       + F+PS  EV   PGE   +VA+R   + E  +  +CRDGGCY CE+EV          +L+R C +K+PE        + ++ I+++++ AF+
Sbjct:   40 TTTTTATTVHFEPSGSEVTASPGESLFDVAERVGELAEKPER-YCRDGGCYRCEMEV--------NGDLLRICQYKIPETRTYLDVLRCVSFIRIAAEGAFQ 132
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig628.14042.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LEC6_ECTSI2.610e-4773.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
M2VVV3_GALSU1.080e-1034.652Fe-2S iron-sulfur cluster binding domain protein ... [more]
A0A7S3EKU6_9RHOD3.530e-932.35Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..150
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..17
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..22
score: 0.542
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 57..131

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig628contigH-paniculata_contig628:10523..12780 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig628.14042.1mRNA_H-paniculata_contig628.14042.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig628 10377..13555 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig628.14042.1 ID=prot_H-paniculata_contig628.14042.1|Name=mRNA_H-paniculata_contig628.14042.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MRAPGMMLEAVCLLSLMGYGHGFLMYGSTTGWRRRQDGNLKGLMKLETAA
GTVVDEEVLISFKPSEVEVVCKPGEVALEVAQRCSGMVEDNKNPFCRDGG
CYNCEVEVVEATELGLEDNLVRACMFKVPEGAKKITLIQMSSDEAFEDMV
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR0360102Fe-2S_ferredoxin-like_sf