mRNA_H-paniculata_contig6279.14041.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Match: D8LEW1_ECTSI (D27-like_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW1_ECTSI) HSP 1 Score: 413 bits (1061), Expect = 2.740e-137 Identity = 204/270 (75.56%), Postives = 226/270 (83.70%), Query Frame = 1
Query: 502 RCVRARSSVVGEDAA---TGGTSYPKS---RPPLKVIRGRAGPSDATPTYDDTRPLDRVLLGLFRSKLAAEVGGD--VYREGYDGLMDMICNLNEQYPSKRQTQKASRRVLKSLFPSWLPASFAVMFSKPFPAFSARLNAWVTLVASQWLMGPSALNDVEIDGGVVGKSHGLLVERCRFLESAGCASVCMNTCKVPTEEFFMKDMGLPLEMTPNYDDFSCQFAFKKTPLPRDVDEVFRVACFEQCPSKGALRDGK--SVSRCHKIEIESD 1281
RC SS +G A GG + +PPLKVIRGRAGP+DATPTYDDTRPLDR+LLGLFRSKLA EVGGD + GYDGLMDMI LNE++PSKR+TQ+ASRRVLKSLFPSWLPASFAVMFSKPFPAFS+RLNAWVTLVASQWLMGPS LND+EID G VG HGLLVERCRFLE+AGCASVCMNTCKVPTEEFF KDMGL LEMTPNY+DFSCQF+F KTPL RD+DE FRVACFEQCPS+GALR +V+RCH+I+I+ D
Sbjct: 46 RCRARSSSTIGGSTALDPVGGAGIEPADAAKPPLKVIRGRAGPTDATPTYDDTRPLDRILLGLFRSKLAEEVGGDGDAFEPGYDGLMDMIKVLNEKFPSKRKTQEASRRVLKSLFPSWLPASFAVMFSKPFPAFSSRLNAWVTLVASQWLMGPSKLNDIEIDDGTVGVGHGLLVERCRFLEAAGCASVCMNTCKVPTEEFFAKDMGLALEMTPNYEDFSCQFSFNKTPLARDMDEAFRVACFEQCPSRGALRQPNQPAVARCHQIDIDED 315
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Match: A0A835ZDY9_9STRA (D27-like_C domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDY9_9STRA) HSP 1 Score: 293 bits (751), Expect = 2.030e-92 Identity = 139/208 (66.83%), Postives = 168/208 (80.77%), Query Frame = 1
Query: 658 VLLGLFRSKLAAEVGGDVYREGYDGLMDMICNLNEQ--YPSKRQTQKASRRVLKSLFPSWLPASFAVMFSKPFPAFSARLNAWVTLVASQWLMGPSALNDVEIDGGVVGKSHGLLVERCRFLESAGCASVCMNTCKVPTEEFFMKDMGLPLEMTPNYDDFSCQFAFKKTPLPRDVDEVFRVACFEQCPSKGALRDGKSVSRCHKIEIE 1275
+LLGLFR KLAAE+ D GY GL++MI +LN+ YP+ TQ+A+R+VL+SLFP WLP +FAVMFSKPFP FS R+NAWVTLVASQWLMGPS +NDVEIDGG +G HGLLV+RCR+LE AGCASVC+NTCK+PT+EFFMKDMGLPL+MTP+YDDFSCQF+F K PL + DEVF VACFEQCP+K + + CHK+ +E
Sbjct: 1 MLLGLFRKKLAAELQYDGSDPGYAGLIEMIRSLNDGPGYPTAHDTQQAARKVLQSLFPPWLPGAFAVMFSKPFPQFSCRMNAWVTLVASQWLMGPSKINDVEIDGGQMGVGHGLLVKRCRYLEEAGCASVCVNTCKIPTQEFFMKDMGLPLQMTPDYDDFSCQFSFGKIPLEPEQDEVFAVACFEQCPNKASTK-----RLCHKVGLE 203
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Match: A0A8J4BT63_9CHLO (D27-like_C domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4BT63_9CHLO) HSP 1 Score: 274 bits (701), Expect = 3.800e-84 Identity = 128/227 (56.39%), Postives = 168/227 (74.01%), Query Frame = 1
Query: 604 AGPSDATPTYDD--TRPLDRVLLGLFRSKLAAEVGGDVYREGYDGLMDMICNLNEQYPSKRQTQKASRRVLKSLFPSWLPASFAVMFSKPFPAFSARLNAWVTLVASQWLMGPSALNDVEIDGGVVGKSHGLLVERCRFLESAGCASVCMNTCKVPTEEFFMKDMGLPLEMTPNYDDFSCQFAFKKTPLPRDVDEVFRVACFEQCPSKGALRDGKSVSRCHKIEIES 1278
AGP+D P+Y D ++P++ V++ LFR K+ A +G D GYD ++D+ LN ++ + +TQ+A+R +L +LFPSWLP +F VMFSKPFP FS RLNA T + QWLMGP +NDVEIDGG+VGK HG+LVERCR+LE AGCASVC+N+CK+PT+ FF KDMGL L MTPNY+DFSCQFAF KTP+ ++DE F CF QCPSK + G +S C IE+++
Sbjct: 42 AGPTDPAPSYRDIDSQPVNVVVMALFRRKMVAALGSDSELYGYDAIIDLTRRLNSKFRTGAETQEATRAILNALFPSWLPGAFKVMFSKPFPEFSCRLNALATALTCQWLMGPCKVNDVEIDGGIVGKGHGVLVERCRYLEQAGCASVCINSCKIPTQTFFSKDMGLQLTMTPNYEDFSCQFAFGKTPMLAEMDEAFTTPCFRQCPSK-KVHGG--LSGCGGIELQT 265
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Match: A0A7J7QQS2_9CHLO (D27-like_C domain-containing protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7QQS2_9CHLO) HSP 1 Score: 273 bits (697), Expect = 5.670e-84 Identity = 124/220 (56.36%), Postives = 159/220 (72.27%), Query Frame = 1
Query: 601 RAGPSDATPTYD--DTRPLDRVLLGLFRSKLAAEVGGDVYREGYDGLMDMICNLNEQYPSKRQTQKASRRVLKSLFPSWLPASFAVMFSKPFPAFSARLNAWVTLVASQWLMGPSALNDVEIDGGVVGKSHGLLVERCRFLESAGCASVCMNTCKVPTEEFFMKDMGLPLEMTPNYDDFSCQFAFKKTPLPRDVDEVFRVACFEQCPSKGALRDGKSVSR 1254
+AGP + P Y D++PL++V++ LFR K+ A +G D GY+ ++D+ LN Y RQ Q +R++LKSLFPSWLP +FAVMFSKP P FS +LNA T + QWLMGP +NDVE+D G VG+ G+LVERCR+LE AGCAS+C+N+CKVPT+EFF KDMGLPL MTPNY+DFSCQF F K PLP+ +DE F CF+QCPS+ A S S+
Sbjct: 1 QAGPVEPVPDYTAIDSQPLNQVVMALFRRKMVAAIGSDSQLSGYEAIIDLTRRLNASYSEARQVQLTTRKILKSLFPSWLPGAFAVMFSKPLPEFSCKLNALATALTCQWLMGPCKVNDVELDDGSVGQGMGVLVERCRYLEQAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFTFGKAPLPQQLDEAFSTPCFQQCPSRAARYSDCSSSK 220
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Match: A0A0D2MYG1_9CHLO (D27-like_C domain-containing protein n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2MYG1_9CHLO) HSP 1 Score: 274 bits (701), Expect = 8.900e-84 Identity = 126/209 (60.29%), Postives = 153/209 (73.21%), Query Frame = 1
Query: 601 RAGPSDATPTYD--DTRPLDRVLLGLFRSKLAAEVGGDVYREGYDGLMDMICNLNEQYPSKRQTQKASRRVLKSLFPSWLPASFAVMFSKPFPAFSARLNAWVTLVASQWLMGPSALNDVEIDGGVVGKSHGLLVERCRFLESAGCASVCMNTCKVPTEEFFMKDMGLPLEMTPNYDDFSCQFAFKKTPLPRDVDEVFRVACFEQCPSK 1221
+AGP P+Y D +PL+RV++ LFR K+ +G D +GY ++D+ LN QY + R TQ A+RR+L SLFPSWLP +F VMFS P PAFS RLNA T + QWLMGP +NDVE+D G VG G+LVERCR+LE AGCAS+C+N+CKVPT+EFF KDMGLPL MTPNY+DFSCQFAF KTPLP+ DE F CF QCPSK
Sbjct: 64 QAGPGTPAPSYAEIDAQPLNRVVMALFRRKMVESIGSDSQLQGYPAIIDLTRRLNRQYQTARDTQLATRRILNSLFPSWLPGAFKVMFSAPLPAFSCRLNALATALTCQWLMGPCKVNDVELDSGEVGSGMGVLVERCRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYEDFSCQFAFGKTPLPQSQDEAFSTPCFTQCPSK 272
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Match: I0YX40_COCSC (D27-like_C domain-containing protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YX40_COCSC) HSP 1 Score: 270 bits (691), Expect = 3.850e-83 Identity = 123/228 (53.95%), Postives = 162/228 (71.05%), Query Frame = 1
Query: 601 RAGPSDATPTYD--DTRPLDRVLLGLFRSKLAAEVGGDVYREGYDGLMDMICNLNEQYPSKRQTQKASRRVLKSLFPSWLPASFAVMFSKPFPAFSARLNAWVTLVASQWLMGPSALNDVEIDGGVVGKSHGLLVERCRFLESAGCASVCMNTCKVPTEEFFMKDMGLPLEMTPNYDDFSCQFAFKKTPLPRDVDEVFRVACFEQCPSKGALRDGKSVSRCHKIEIES 1278
+AGP P+Y+ D++PL+R ++ LFR K+ A +G + +EGYD ++D+ LN + + R TQ +R++L SLFPSWLP +F VMFSKP P S +LNAWVT++ QWLMGP +NDVE+DGG +G G+LVERCR+LE GCASVC+N+CK+PT+EFF KDMGLPL MTPNY+DFSCQF+F TP P +DE F CF QCPSK R RC ++E+
Sbjct: 7 KAGPETPAPSYESIDSQPLNRAIMSLFRQKMVAAIGKNSDKEGYDAIVDLTRLLNSKSSNPRDTQVKTRQILLSLFPSWLPPAFKVMFSKPMPEVSCQLNAWVTMLTCQWLMGPCKVNDVELDGGRIGSGQGVLVERCRYLEETGCASVCLNSCKIPTQEFFAKDMGLPLTMTPNYEDFSCQFSFGLTPKPAAIDEAFATPCFSQCPSKQRHRG----DRCPGADVEA 230
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Match: A0A2V0P122_9CHLO (D27-like_C domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P122_9CHLO) HSP 1 Score: 273 bits (699), Expect = 4.770e-83 Identity = 133/242 (54.96%), Postives = 166/242 (68.60%), Query Frame = 1
Query: 601 RAGPSDATPTYD--DTRPLDRVLLGLFRSKLAAEVGGDVYREGYDGLMDMICNLNEQYPSKRQTQKASRRVLKSLFPSWLPASFAVMFSKPFPAFSARLNAWVTLVASQWLMGPSALNDVEIDGGVVGKSHGLLVERCRFLESAGCASVCMNTCKVPTEEFFMKDMGLPLEMTPNYDDFSCQFAFKKTPLPRDVDEVFRVACFEQCPSKGALRD---GK-------SVSRCHKIEIESD*FE 1290
+AGP+ A P Y D +PL+RV++ LFR K+A +G D +GY ++D+ LN QYP+ R TQ +R +L SLFP WLP +F MFS+P PA S RLNA+ T + QWLMGP +NDVEIDGG VG G+LVERCR+LE AGCAS+C+N+CKVPT+EFF KDMGLPL MTPNYDDFSCQFAF KTP P+ DE F CF QCPS+ D GK +VSR + +E+ F+
Sbjct: 21 QAGPAAAAPDYAGVDAQPLNRVVMALFRRKMAEAIGSDSQLQGYPAIIDLTRRLNRQYPTARDTQLTTRAILNSLFPGWLPGAFRAMFSRPLPALSCRLNAFATALTCQWLMGPCKVNDVEIDGGQVGAGMGVLVERCRYLEEAGCASICINSCKVPTQEFFEKDMGLPLTMTPNYDDFSCQFAFGKTPQPQAEDEAFSTPCFTQCPSRRRAFDDANGKPGDCVNIAVSRGKNLFVETPEFD 262
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Match: A8IC34_CHLRE (Predicted protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IC34_CHLRE) HSP 1 Score: 266 bits (681), Expect = 5.340e-81 Identity = 123/209 (58.85%), Postives = 153/209 (73.21%), Query Frame = 1
Query: 601 RAGPSDATPTYD--DTRPLDRVLLGLFRSKLAAEVGGDVYREGYDGLMDMICNLNEQYPSKRQTQKASRRVLKSLFPSWLPASFAVMFSKPFPAFSARLNAWVTLVASQWLMGPSALNDVEIDGGVVGKSHGLLVERCRFLESAGCASVCMNTCKVPTEEFFMKDMGLPLEMTPNYDDFSCQFAFKKTPLPRDVDEVFRVACFEQCPSK 1221
+AGP DA P Y D++PL+ +++ LFR K+ +G D GYD ++D+ LN ++ + +TQ+A+R +L +LFPSWLP +F VMFS+P P FS RLNA T + QWLMGP +NDVEIDGG VG HG+LVERCR+LE AGCASVC+N+CKVPT+ FF KDMGLPL MTPNYDDFSCQF+F KTP P D D F CF QCPSK
Sbjct: 50 QAGPVDAAPDYKPIDSQPLNIIVMALFRRKMVEALGSDSKLSGYDAIIDLTRKLNTKFRTAAETQEATRGILNALFPSWLPGAFKVMFSRPLPEFSCRLNALATAMTCQWLMGPCKVNDVEIDGGKVGTGHGVLVERCRYLEQAGCASVCINSCKVPTQSFFEKDMGLPLTMTPNYDDFSCQFSFGKTPDPVDRDPAFATPCFTQCPSK 258
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Match: K8YRB8_NANGC (D27-like_C domain-containing protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YRB8_NANGC) HSP 1 Score: 263 bits (673), Expect = 9.260e-80 Identity = 130/228 (57.02%), Postives = 165/228 (72.37%), Query Frame = 1
Query: 601 RAGPSDATPTYD-DTRPLDRVLLGLFRSKLAAEVGG-DVYREGYDGLMDMICNLNEQYPS--KRQTQKASRRVLKSLFPSWLPASFAVMFSKPFPAFSARLNAWVTLVASQWLMGPSALNDVEIDGGVVGKSHGLLVERCRFLESAGCASVCMNTCKVPTEEFFMKDMGLPLEMTPNYDDFSCQFAFKKTPLPRDVDEVFRVACFEQCPSKGALRDGKSVSRCHKIEI 1272
R GP DA P Y RP D +L FR+KL ++GG D + + GL+++I LN Q+P+ K TQKA++ +L+SLFPSWLPA+FAVMFSKPFPAFSAR+NA +T + + WLMG S + DV++DGG VG GLLV+RCR+LE AGCAS+C+NTCK+PT+ FF +DMGLPL MTP+YDDFSC FAF TP P DE RVACF QCP+ A +S CH+IE+
Sbjct: 59 RRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTQFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVDGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPVFDDEAMRVACFSQCPTAKAPTG--ELSNCHEIEL 284
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Match: A0A4D9DA54_9STRA (D27-like_C domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DA54_9STRA) HSP 1 Score: 260 bits (664), Expect = 1.860e-78 Identity = 128/228 (56.14%), Postives = 163/228 (71.49%), Query Frame = 1
Query: 601 RAGPSDATPTYD-DTRPLDRVLLGLFRSKLAAEVGG-DVYREGYDGLMDMICNLNEQYPS--KRQTQKASRRVLKSLFPSWLPASFAVMFSKPFPAFSARLNAWVTLVASQWLMGPSALNDVEIDGGVVGKSHGLLVERCRFLESAGCASVCMNTCKVPTEEFFMKDMGLPLEMTPNYDDFSCQFAFKKTPLPRDVDEVFRVACFEQCPSKGALRDGKSVSRCHKIEI 1272
R GP DA P Y RP D +L FR+KL ++GG D + + GL+++I LN +P+ K TQKA++ +L+SLFPSWLPA+FAVMFSKPFPAFSAR+NA +T + + WLMG S + DV++ GG VG GLLV+RCR+LE AGCAS+C+NTCK+PT+ FF +DMGLPL MTP+YDDFSC FAF TP P DE RVACF QCP+ A +S CH+IE+
Sbjct: 57 RRGPIDAPPEYGMQRRPFDGLLYAFFRAKLVQQLGGSDTASKDFAGLIELIRKLNTHFPASGKVGTQKAAQNILRSLFPSWLPAAFAVMFSKPFPAFSARMNAIITGLTTYWLMGESEIIDVDVTGGSVGVGQGLLVKRCRYLEEAGCASICVNTCKIPTQNFFCQDMGLPLTMTPDYDDFSCTFAFGLTPPPEVDDEAMRVACFSQCPTAKAPTG--ELSNCHQIEL 282 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6279.14041.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6279.14041.1 >prot_H-paniculata_contig6279.14041.1 ID=prot_H-paniculata_contig6279.14041.1|Name=mRNA_H-paniculata_contig6279.14041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=322bp MRSKLSVVGAVLLALIAPRKRTHGFHVLRGTTSLYTQQTAIVGSSRVIESback to top mRNA from alignment at H-paniculata_contig6279:4843..12719+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6279.14041.1 ID=mRNA_H-paniculata_contig6279.14041.1|Name=mRNA_H-paniculata_contig6279.14041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7877bp|location=Sequence derived from alignment at H-paniculata_contig6279:4843..12719+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6279:4843..12719+ >mRNA_H-paniculata_contig6279.14041.1 ID=mRNA_H-paniculata_contig6279.14041.1|Name=mRNA_H-paniculata_contig6279.14041.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1932bp|location=Sequence derived from alignment at H-paniculata_contig6279:4843..12719+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |