prot_H-paniculata_contig6273.14035.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6273.14035.1 vs. uniprot
Match: A0A6H5JCD8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCD8_9PHAE) HSP 1 Score: 60.1 bits (144), Expect = 1.450e-8 Identity = 34/87 (39.08%), Postives = 45/87 (51.72%), Query Frame = 0
Query: 2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMIMCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRG 87
W K LV + +G Q +D CV RL + GVV M++ VHVDD+ GK +C+ L T GEL+ Y G F RD +G
Sbjct: 761 WHKHLVRGM-KCLGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQG 846
BLAST of mRNA_H-paniculata_contig6273.14035.1 vs. uniprot
Match: A0A6H5K5C3_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5C3_9PHAE) HSP 1 Score: 59.7 bits (143), Expect = 1.940e-8 Identity = 33/84 (39.29%), Postives = 45/84 (53.57%), Query Frame = 0
Query: 2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMIMCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDI 84
W + LV + V Q +D CV RL ++ V M++ VHVDD+ G+ +CD A L + GEL+WY GC F RDI
Sbjct: 371 WHQHLVRGM-KRVHFEQCLADACVMRLVEHRAVTMVVVVHVDDIPSIGRKGRCDQFGADLIKYVPISNLGELRWYAGCRFSRDI 453
BLAST of mRNA_H-paniculata_contig6273.14035.1 vs. uniprot
Match: A0A6H5L5Q2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5Q2_9PHAE) HSP 1 Score: 57.4 bits (137), Expect = 1.160e-7 Identity = 30/75 (40.00%), Postives = 40/75 (53.33%), Query Frame = 0
Query: 14 VGMTQSKSDPCVFRLEKNGVVDMIMCVHVDDVIVAGKSVKCDSLFAALRAEFQTTR-GELKWYLGCAFWRDIVRG 87
+G Q +D CV RL + GVV M++ VHVDD+ GK +C+ L T GEL+ Y G F RD +G
Sbjct: 4 LGFEQCAADACVMRLIEEGVVAMVVVVHVDDIFSIGKKSRCEQFGRDLNEYVPITNLGELRLYAGIRFSRDFAQG 78
BLAST of mRNA_H-paniculata_contig6273.14035.1 vs. uniprot
Match: A0A6S7KQT6_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KQT6_PARCT) HSP 1 Score: 53.1 bits (126), Expect = 3.060e-6 Identity = 32/78 (41.03%), Postives = 50/78 (64.10%), Query Frame = 0
Query: 2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMIMCVHVDDVIVAGKS-VKCDSLFAALRAEFQTT-RGELKWYLG 77
W+ L E L ++G TQ++SDPC++ EK+G + I+ +HVD++I+AGK+ K L ++ FQ GELK+ LG
Sbjct: 60 WNSVLDEHL-KSIGFTQTESDPCIYVKEKDGNI-FIVVIHVDNIILAGKTNEKIAKLKESIAERFQVAGMGELKYILG 135
BLAST of mRNA_H-paniculata_contig6273.14035.1 vs. uniprot
Match: A0A1M2VT27_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VT27_TRAPU) HSP 1 Score: 49.7 bits (117), Expect = 6.320e-5 Identity = 32/84 (38.10%), Postives = 47/84 (55.95%), Query Frame = 0
Query: 2 WSKRLVEVLVNNVGMTQSKSDPCVFRLEKNGVVDMIMCVHVDDV-IVAGKSVKCDSLFAALRAEFQTT-RGELKWYLGCAFWRD 83
W K+L+ VL + +GM+QS D VF +G +++ VHVDD+ +VA + A LR F+ + GE+ W LG A RD
Sbjct: 87 WHKKLLRVLRDKLGMSQSDVDQAVFY-RVDGTDLIVIVVHVDDLTVVAATDALIREVKAKLREAFEISDEGEIHWILGFAVERD 169 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6273.14035.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig6273.14035.1 ID=prot_H-paniculata_contig6273.14035.1|Name=mRNA_H-paniculata_contig6273.14035.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bpback to top |