prot_H-paniculata_contig62707.14031.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig62707.14031.1
Unique Nameprot_H-paniculata_contig62707.14031.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length65
Homology
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Match: D1J760_ECTSI (50S ribosomal protein L35, chloroplastic n=3 Tax=Ectocarpales TaxID=2877 RepID=D1J760_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 1.220e-33
Identity = 64/64 (100.00%), Postives = 64/64 (100.00%), Query Frame = 0
Query:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLVH 64
            MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLVH
Sbjct:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLVH 64          
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Match: A0A7T8G5H8_SCYLO (50S ribosomal protein L35, chloroplastic n=3 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8G5H8_SCYLO)

HSP 1 Score: 108 bits (270), Expect = 1.600e-29
Identity = 58/63 (92.06%), Postives = 62/63 (98.41%), Query Frame = 0
Query:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLV 63
            MPKLKVRK+AKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAK++VVSK DTKAIRKML+
Sbjct:   26 MPKLKVRKAAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKLVVVSKADTKAIRKMLI 88          
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Match: A0A8B0R8A0_SCYLO (50S ribosomal protein L35, chloroplastic n=2 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A8B0R8A0_SCYLO)

HSP 1 Score: 107 bits (266), Expect = 3.260e-29
Identity = 57/63 (90.48%), Postives = 61/63 (96.83%), Query Frame = 0
Query:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLV 63
            MPKLKVRK+AKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAK++VVSK DTK IRKML+
Sbjct:    1 MPKLKVRKAAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKLVVVSKADTKTIRKMLI 63          
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Match: A0A8F0F7Q5_9PHAE (50S ribosomal protein L35 n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7Q5_9PHAE)

HSP 1 Score: 100 bits (249), Expect = 1.280e-26
Identity = 55/63 (87.30%), Postives = 58/63 (92.06%), Query Frame = 0
Query:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLV 63
            MPKLKVRK+AKKRYKLIAGKRF+RRKAFKGHLLEKKSPKQK+NL   IVV K DTKAIRKMLV
Sbjct:    1 MPKLKVRKAAKKRYKLIAGKRFVRRKAFKGHLLEKKSPKQKRNLTGNIVVKKSDTKAIRKMLV 63          
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Match: A0A0R6M006_UNDPI (50S ribosomal protein L35, chloroplastic n=24 Tax=Laminariales TaxID=2886 RepID=A0A0R6M006_UNDPI)

HSP 1 Score: 97.4 bits (241), Expect = 2.130e-25
Identity = 53/63 (84.13%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLV 63
            MPKLK RK+AKKRYKLIA KRF+RRKAFKGHLLEKKS KQK+NLA  I+VSK DTKAIRKMLV
Sbjct:    1 MPKLKTRKAAKKRYKLIARKRFVRRKAFKGHLLEKKSAKQKRNLANTIIVSKSDTKAIRKMLV 63          
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Match: A0A6B7EUY3_9PHAE (50S ribosomal protein L35 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EUY3_9PHAE)

HSP 1 Score: 95.9 bits (237), Expect = 8.680e-25
Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = 0
Query:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKML 62
            MPKLKV+K+AKKRYKLIA KRFIRRKAFK H+LEKKSPKQK+NL+K IVVSK DTKAI+KML
Sbjct:    1 MPKLKVKKAAKKRYKLIAEKRFIRRKAFKSHILEKKSPKQKRNLSKSIVVSKSDTKAIKKML 62          
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Match: A0A8F0JZ08_9PHAE (50S ribosomal protein L35 n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0JZ08_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.750e-24
Identity = 52/63 (82.54%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLV 63
            MPKLK RK+A+KRYK IAGKRF+RRKAFKGHLLEKKSPKQK NLA  +VVSK DTKAIR MLV
Sbjct:    1 MPKLKTRKAAQKRYKRIAGKRFVRRKAFKGHLLEKKSPKQKNNLANPVVVSKSDTKAIRIMLV 63          
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Match: A0A8F0F748_9PHAE (50S ribosomal protein L35 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F748_9PHAE)

HSP 1 Score: 91.7 bits (226), Expect = 4.140e-23
Identity = 50/63 (79.37%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLV 63
            M KLKVRK+AKKRYKLI GKRFIR+KAFKGHLLEKKS K+K+NL   ++VSKPDTKAIR MLV
Sbjct:    1 MRKLKVRKAAKKRYKLITGKRFIRQKAFKGHLLEKKSTKRKRNLTNAVLVSKPDTKAIRIMLV 63          
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Match: A0A2R4QPW2_9PHAE (50S ribosomal protein L35 n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPW2_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 6.880e-22
Identity = 46/63 (73.02%), Postives = 57/63 (90.48%), Query Frame = 0
Query:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLV 63
            MPKLKVRKSAKKRYKLI GK+F+R+KAFKGHLLEKK  K+K+NL+  ++V++ DTKAI+KMLV
Sbjct:    1 MPKLKVRKSAKKRYKLIKGKKFVRQKAFKGHLLEKKCSKRKRNLSSRVIVNQSDTKAIKKMLV 63          
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Match: A0A8E5XRC2_9PHAE (50S ribosomal protein L35, chloroplastic n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRC2_9PHAE)

HSP 1 Score: 86.7 bits (213), Expect = 3.980e-21
Identity = 46/63 (73.02%), Postives = 56/63 (88.89%), Query Frame = 0
Query:    1 MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVVSKPDTKAIRKMLV 63
            M KLKVRK+A+KRYKLI+ K F+R+KAFK HLLEKKS KQK+NLA VI+VSK D+KAI+KML+
Sbjct:    1 MSKLKVRKAARKRYKLISNKMFLRKKAFKSHLLEKKSTKQKRNLANVIIVSKADSKAIKKMLI 63          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig62707.14031.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D1J760_ECTSI1.220e-33100.0050S ribosomal protein L35, chloroplastic n=3 Tax=E... [more]
A0A7T8G5H8_SCYLO1.600e-2992.0650S ribosomal protein L35, chloroplastic n=3 Tax=S... [more]
A0A8B0R8A0_SCYLO3.260e-2990.4850S ribosomal protein L35, chloroplastic n=2 Tax=S... [more]
A0A8F0F7Q5_9PHAE1.280e-2687.3050S ribosomal protein L35 n=2 Tax=Laminariales Tax... [more]
A0A0R6M006_UNDPI2.130e-2584.1350S ribosomal protein L35, chloroplastic n=24 Tax=... [more]
A0A6B7EUY3_9PHAE8.680e-2583.8750S ribosomal protein L35 n=1 Tax=Cladosiphon okam... [more]
A0A8F0JZ08_9PHAE1.750e-2482.5450S ribosomal protein L35 n=1 Tax=Desmarestia acul... [more]
A0A8F0F748_9PHAE4.140e-2379.3750S ribosomal protein L35 n=1 Tax=Protohalopteris ... [more]
A0A2R4QPW2_9PHAE6.880e-2273.0250S ribosomal protein L35 n=3 Tax=Fucaceae TaxID=3... [more]
A0A8E5XRC2_9PHAE3.980e-2173.0250S ribosomal protein L35, chloroplastic n=1 Tax=I... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001706Ribosomal protein L35, non-mitochondrialPRINTSPR00064RIBOSOMALL35coord: 36..54
score: 36.09
coord: 3..20
score: 39.95
coord: 21..35
score: 41.9
IPR001706Ribosomal protein L35, non-mitochondrialTIGRFAMTIGR00001TIGR00001coord: 2..62
e-value: 5.7E-19
score: 66.2
IPR001706Ribosomal protein L35, non-mitochondrialHAMAPMF_00514Ribosomal_L35coord: 1..64
score: 16.043
IPR021137Ribosomal protein L35PFAMPF01632Ribosomal_L35pcoord: 2..62
e-value: 1.4E-16
score: 60.7
IPR021137Ribosomal protein L35PANTHERPTHR33343FAMILY NOT NAMEDcoord: 2..62
NoneNo IPR availableGENE3D2.40.50.530coord: 1..64
e-value: 4.6E-16
score: 61.1
NoneNo IPR availablePANTHERPTHR33343:SF150S RIBOSOMAL PROTEIN L35coord: 2..62
IPR018265Ribosomal protein L35, conserved sitePROSITEPS00936RIBOSOMAL_L35coord: 5..31
IPR037229Ribosomal protein L35 superfamilySUPERFAMILY143034L35p-likecoord: 2..62

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig62707contigH-paniculata_contig62707:203..397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig62707.14031.1mRNA_H-paniculata_contig62707.14031.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig62707 203..397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig62707.14031.1 ID=prot_H-paniculata_contig62707.14031.1|Name=mRNA_H-paniculata_contig62707.14031.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=65bp
MPKLKVRKSAKKRYKLIAGKRFIRRKAFKGHLLEKKSPKQKKNLAKVIVV
SKPDTKAIRKMLVH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001706Ribosomal_L35_non-mt
IPR021137Ribosomal_L35
IPR018265Ribosomal_L35_CS
IPR037229Ribosomal_L35_sf