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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 889 |
| Cds size | 624 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12208.1402.1 >prot_H-paniculata_contig12208.1402.1 ID=prot_H-paniculata_contig12208.1402.1|Name=mRNA_H-paniculata_contig12208.1402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=208bp
MSDSSRTLQSVMAENYSSIEDFVESTPKAFAWDTSFYSKAPAQHDGPGMT
PPAGEVTGSGGVGDETGGAVGGEIGPSPTGLESAAGRPFGDLDWSMWRFA
MFAMLVDDSDPLLISQNVVVVEATERKIILDWYSSKRKSRRRSSYGKGAW
SPDQDPTDRSKPDRVPECMVAACMTFPKLLCTKNIPKSVWDTVAEEVPLP
QDDDEDE* back to topmRNA from alignment at H-paniculata_contig12208:915..3360- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig12208.1402.1 ID=mRNA_H-paniculata_contig12208.1402.1|Name=mRNA_H-paniculata_contig12208.1402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2446bp|location=Sequence derived from alignment at H-paniculata_contig12208:915..3360- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCGAAACGTGACCTTCCCCCAATCCCCTGGACGTAACCTTGAAACGGTGA
GCCATGTCAACCGAAGGGGGGGTAAATATCCATCTTCGAAGTTGTGAGTT
ATCCTACGGTAGGGCGCGGGGTATTTGAGTCGCTTTGGTTAGGGAAGGTG
CGGCTTTGAGAAGGTGATTGGGCATATTGTTTTCTTTTTGTATTTGTTGC
TGACCTCCAGTACGATCGCCTAGGGGCTGATCGATGAAGTGCTGGCGCCC
GAGACAGAAGGTGGGCTTAACGACTAAGATTAGTTCTAAAGAGTGTTCGA
CCCGCGCCCGTACCTAATGAGGCATTGCGATGGGGATCGTGCGACGAGCG
CGCTGTCGTTGTCATCATTTCGTGTATGATCAGGCTTTTTGTGTAATTCT
TGACGGGCATGCGGTGTATGCGCATTGGAACGCTACGCTGCGTGATACAA
ACACAGCAGAAAATAGTAGCACTCGCGAGCGGTGAGGATAGCTGTAGCAA
CAGCAGCGCCACCACAACCAGCAACGCACAGAAGCACACGCAGTGTTTGA
ATGATCAGTTTTTTCTCAAAATGATGTTGCTCACAGTGACACCCCCAATT
ATCATTATTATCATTATTATTTCCCTTTAAAGAACAAGTCTGACTTCCAG
CGACCTCAATAATTACACTCTCTCAAGTTGTAGATGGCACATGGGTTTCG
CAGCGTGTGAAGCAATATGACTAGCGTGGTTTTGATGTCATAGAGCTACA
CTTCGGTCTCAAAGGTCACACCCACGACGGTAAGCCGGTGATAGACATGT
AGATTTGAATTTGAATACACTATGATGTAAGACTCGTGCGTCAGGTACTT
CTCTTCGCTGCAAACCGGAGTTTACGTTGATAGCCTGAGTGCTGCTGATA
TGTTGCTCAGCGTGAAGGAGCCCGCAGTTTGCATCCATAAAATAAACCTG
CGCTCGGCTCTTCATTGTTCCAACCTCAACCACATATTCGTTGTGCGCGT
CATGCAACGTCCGTTCGCCTCCCATCGCTCATGATCCACTGCACGCGATC
TACATGGGGATTGCCCCCACTCCATGTGAAGCAAAGATCGACCAGATTTT
TTCCGAAGCGAGTCACTCGATGCCGCAGGTTGCCGTTAACCACGCCACTT
CGTTCTTTACATTCCCCTGTGAAACGGCTGTCATAGTATAATAATATGGC
ACGTTATATATTTGTGCTGAAAAGGCCGGCAGCGGTCAAGGGTGCAAGCG
TGGCCTCACACTCGAGGCGTCACCGCTTGACTTCTACCCGTTGTTGCTGA
ACATGCGAAACCGCACTCGCGGCGTGTTGCCTCTTAACCCCGTGATTTCC
CAGGGTTGGCATTCATCTCAGGGCGCGTAATGCTTCTACGCGTACTCACC
TCGGAGAGCTCGTCAAGTCATCATACAAGCCCTCTTTCCCGGTCGAGATG
ACGCACCTCAACAACTGCGCCAACTTTCGAGATCTTGTGGCCCCTGCATG
TTCGCGATCCCACACATCACGAAGCGTCAGAGGAACGCGCCAGGGGCATT
GTCATGTCAGGCGAGCCGCGTCTTTCGTCTGGTTGGCTTGCTACCTCGAA
CTCACTCGTAAAGCGCTTGCGTATGGAATCTTTAAACTAATCAATGGCTG
GTCCAATGTTTTTGTGCACTGACGCACACTGCTGACCATCACCGAGGCGT
GACTGTTCCTCCGAAATGCATGCCTCCGATCCACACCCCGAGTCTGAATG
AATATTCTCTATCCAACAAATTTCTCGCACACCGCTTTGTCAATCCCGCA
CATCATCCAGACTCGTCACGGACGCTTCAGTCCGTTATGGCAGAAAACTA
TTCAAGCATTGAGGATTTCGTCGAGAGTACCCCCAAGGCGTTCGCGTGGG
ATACGAGCTTCTACTCAAAAGCACCTGCGCAGCATGATGGACCCGGCATG
ACGCCGCCCGCTGGTGAAGTCACGGGGAGTGGGGGAGTTGGGGACGAAAC
TGGAGGTGCGGTTGGTGGCGAAATCGGACCCAGCCCCACGGGCCTGGAAA
GTGCTGCAGGCCGACCGTTTGGCGACCTCGATTGGAGTATGTGGCGCTTT
GCGATGTTTGCTATGCTTGTGGACGACTCCGATCCTCTCCTGATCAGCCA
GAATGTGGTAGTCGTTGAGGCGACAGAAAGAAAGATAATCCTTGATTGGT
ACTCATCAAAACGGAAGAGTCGGCGGCGGAGCTCGTATGGTAAGGGTGCA
TGGTCTCCTGACCAAGATCCGACCGACCGCTCAAAGCCGGACAGGGTCCC
TGAGTGCATGGTCGCTGCATGCATGACGTTTCCTAAGCTCCTCTGCACCA
AAAATATTCCGAAATCGGTGTGGGATACAGTGGCGGAAGAAGTGCCGTTG
CCACAAGACGACGATGAGGACGAGTGAGAGGAGGAGGGGGAGGAGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig12208:915..3360- >mRNA_H-paniculata_contig12208.1402.1 ID=mRNA_H-paniculata_contig12208.1402.1|Name=mRNA_H-paniculata_contig12208.1402.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1248bp|location=Sequence derived from alignment at H-paniculata_contig12208:915..3360- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCAGATGTCAGACTCGTCACGGACGCTTCAGTCCGTTATGGCAGAAA
ACTATTCAAGCATTGAGGATTTCGTCGAGAGTACCCCCAAGGCGTTCGCG
TGGGATACGAGCTTCTACTCAAAAGCACCTGCGCAGCATGATGGACCCGG
CATGACGCCGCCCGCTGGTGAAGTCACGGGGAGTGGGGGAGTTGGGGACG
AAACTGGAGGTGCGGTTGGTGGCGAAATCGGACCCAGCCCCACGGGCCTG
GAAAGTGCTGCAGGCCGACCGTTTGGCGACCTCGATTGGAGTATGTGGCG
CTTTGCGATGTTTGCTATGCTTGTGGACGACTCCGATCCTCTCCTGATCA
GCCAGAATGTGGTAGTCGTTGAGGCGACAGAAAGAAAGATAATCCTTGAT
TGGTACTCATCAAAACGGAAGAGTCGGCGGCGGAGCTCGTATGGTAAGGG
TGCATGGTCTCCTGACCAAGATCCGACCGACCGCTCAAAGCCGGACAGGG
TCCCTGAGTGCATGGTCGCTGCATGCATGACGTTTCCTAAGCTCCTCTGC
ACCAAAAATATTCCGAAATCGGTGTGGGATACAGTGGCGGAAGAAGTGCC
GTTGCCACAAGACGACGATGAGGACGAGTGAACTCGTCACGGACGCTTCA
GTCCGTTATGGCAGAAAACTATTCAAGCATTGAGGATTTCGTCGAGAGTA
CCCCCAAGGCGTTCGCGTGGGATACGAGCTTCTACTCAAAAGCACCTGCG
CAGCATGATGGACCCGGCATGACGCCGCCCGCTGGTGAAGTCACGGGGAG
TGGGGGAGTTGGGGACGAAACTGGAGGTGCGGTTGGTGGCGAAATCGGAC
CCAGCCCCACGGGCCTGGAAAGTGCTGCAGGCCGACCGTTTGGCGACCTC
GATTGGAGTATGTGGCGCTTTGCGATGTTTGCTATGCTTGTGGACGACTC
CGATCCTCTCCTGATCAGCCAGAATGTGGTAGTCGTTGAGGCGACAGAAA
GAAAGATAATCCTTGATTGGTACTCATCAAAACGGAAGAGTCGGCGGCGG
AGCTCGTATGGTAAGGGTGCATGGTCTCCTGACCAAGATCCGACCGACCG
CTCAAAGCCGGACAGGGTCCCTGAGTGCATGGTCGCTGCATGCATGACGT
TTCCTAAGCTCCTCTGCACCAAAAATATTCCGAAATCGGTGTGGGATACA
GTGGCGGAAGAAGTGCCGTTGCCACAAGACGACGATGAGGACGAGTGA back to top
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