mRNA_H-paniculata_contig626.14018.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig626.14018.1
Unique NamemRNA_H-paniculata_contig626.14018.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
[Close]
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Match: D7FPR0_ECTSI (Sulfatase-modifying factor 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPR0_ECTSI)

HSP 1 Score: 373 bits (957), Expect = 4.090e-124
Identity = 190/315 (60.32%), Postives = 215/315 (68.25%), Query Frame = 2 
Query:  554 FGTEYEGGGKGAGSPPDGGLPRERVRVMDFAIDVHPVTNDLFATFVKDTGYVTEAENFQWSFVLEYLMDKETIRESDEGIGRVKASPHWMGVEGANWRHPEGPRSSLKGRASFPVAQVSWVDATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGEGREAQKPVFKVGNAWQGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVMQVRLLGICAIHVLLALPPQVYDMLGNAWEWVDGGEPAKRVLRGGSFVDYDPTS----------PPPPANHAITPGTRMETTQDSGSANTSFRCV 1468
             GTEY GGG+GAG+PPDGGLP  +V V  F ID H VTN+ FA FVKD+GYVTEAE F WSF LEY++D ETI+E+DEGIGRVK S HW+GVEGANWR PEGPRSSLK R + PVAQVSWVDA AYC WAGRRLPTE EWE+AARGG   +  E  G ++ K ++ VGN+WQG FP  NS EDG+AGL+P  AF PNAL                                        +VYDMLGNAWEWV GG+P +R LRGGSFVD+DP +          P  PANHAITPGTRMETTQDSGSANTSFRC 
Sbjct:    1 MGTEYTGGGEGAGAPPDGGLPHTQVAVGQFNIDEHCVTNEQFAIFVKDSGYVTEAEKFGWSFALEYMLDAETIKEADEGIGRVKGSEHWVGVEGANWRQPEGPRSSLKSRGNVPVAQVSWVDADAYCSWAGRRLPTEAEWEYAARGGQT-LASEHVGDKSTK-MWLVGNSWQGHFPNTNSVEDGYAGLAPATAFAPNAL----------------------------------------EVYDMLGNAWEWVAGGDPTRRTLRGGSFVDFDPVAAEKNNGSSGIPRQPANHAITPGTRMETTQDSGSANTSFRCA 273
[Close]
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Match: A0A7S2Y1G9_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1G9_9STRA)

HSP 1 Score: 242 bits (617), Expect = 6.500e-73
Identity = 131/319 (41.07%), Postives = 166/319 (52.04%), Query Frame = 2 
Query:  515 LSKQVPVEGATYSFGTEYEGGGKGAGSPPDGGLPRERVRVMDFAIDVHPVTNDLFATFVKDTGYVTEAENFQWSFVLEYLMDKETIRESDEGIGRVKASPHWMGVEGANWRHPEGPRSSLKGRASFPVAQVSWVDATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGEGREAQKPVFKVGNAWQGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVMQVRLLGICAIHVLLALPPQVYDMLGNAWEWVDGGEPAKRVLRGGSFVDYDPTSPPPPANHAITPGTRMETTQDSGSANTSFRCVS 1471
            L+ Q+ + G  +  G+ Y G      +PPDGG     V V  F +D H VTN+ F  F+ DTGY T+A+ F WSFVL Y   +ET  ++D  +GR++  P W+GV  A W HP GP S ++     PV QVSW DA AYC+WAGRRL  E EWE+AAR GL+       G+EA        N WQG FP  N+ EDG+AG +PV +F PN+ G                                         Y+M+GN WEWV GG   KR+L+GGSF+D    S     NH     TR  TT DSG+ NT FRC S
Sbjct:   10 LTPQIYLSGGEFYMGSSYVGADYKKDNPPDGGKQPRIVEVKAFWLDEHAVTNEQFIDFINDTGYETDADKFGWSFVLAYFASEETTIKADNDMGRIEGDPSWLGVREATWEHPLGPDSDVEDILDHPVVQVSWNDARAYCKWAGRRLAREKEWEYAARSGLVGQPFPW-GKEATPQQL---NYWQGDFPLKNNVEDGYAGTAPVKSFEPNSFGF----------------------------------------YNMVGNVWEWVGGGSKEKRILKGGSFIDSIDAS----FNHPALVSTRQLTTADSGNMNTGFRCAS 280
[Close]
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Match: A0A8J2SID5_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SID5_9STRA)

HSP 1 Score: 242 bits (618), Expect = 1.160e-72
Identity = 132/291 (45.36%), Postives = 163/291 (56.01%), Query Frame = 2 
Query:  602 DGGLPRERVRVMDFAIDVHPVTNDLFATFVKDTGYVTEAENFQWSFVLEYLMDKETIRESDE--GIGRVKASPHWMGVEGANWRHPEGPRSSLKGRASFPVAQVSWVDATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGEGREAQKPVFKVGNAWQGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVMQVRLLGICAIHVLLALPPQVYDMLGNAWEWVDGGEPAKRVLRGGSFVDYDPTSPPPPANHAITPGTRMETTQDSGSANTSFRCV 1468
            DG    ++ RV  F ID   V+ND F  FV+ T + TEAE F+WSFVLE L    TI +SD   G+GRV++SPHW+GV GA WR PEGP SS++G+ ++PV QVSW DA AYC WAG+RLP+E+EWE AARGGL         R+    V K  N W+G FP +N  +DG+ G++PV  + PNA GV                                        Y+ +GN WEW  GG P KR LRGGSFVD    S     NHA+   TRM+ T DSG  NT FRC 
Sbjct:   80 DGANVAQQRRVKTFDIDATVVSNDEFKKFVRATKHETEAEKFRWSFVLEMLASNATINQSDSKHGLGRVQSSPHWLGVYGATWRKPEGPDSSIRGKGNYPVIQVSWNDAVAYCAWAGKRLPSELEWETAARGGLEDEPFPWGDRDDD--VHKRMNGWEGAFPDENLAKDGYIGVAPVDQYAPNAFGV----------------------------------------YNAVGNVWEWCAGGTPEKRPLRGGSFVDTVDGS----HNHALRCATRMDQTADSGGHNTGFRCA 324
[Close]
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Match: A0A8J5XF83_DIALT (FGE-sulfatase domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XF83_DIALT)

HSP 1 Score: 239 bits (610), Expect = 1.480e-70
Identity = 136/331 (41.09%), Postives = 175/331 (52.87%), Query Frame = 2 
Query:  500 PAPKILSKQVPVEGATYSFGTEYEGGGK-----GAGSP-PDGGLPRERVRVMDFAIDVHPVTNDLFATFVKDTGYVTEAENFQWSFVLEYLMDKETIR--ESDEGIGRVKASPHWMGVEGANWRHPEGPRSSLKGRASFPVAQVSWVDATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGEGREAQKPVFKVGNAWQGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVMQVRLLGICAIHVLLALPPQVYDMLGNAWEWVDGGEPAKRVLRGGSFVDYDPTSPPPPANHAITPGTRMETTQDSGSANTSFRCV 1468
            P   +LS  VP+ G ++ +G+   G G+      A +P  DG  P  R RV  F+I+   VTN  F  FV+ TGY T+AE F+WSF L   +D ET+   ++D G+GR++ +PHW+GV GA WR PEGPRSS++GR   PV   S+ DA A+C WAGRRLPTE+EWEFAARG +        G E    +    N WQG FP  N++ DG+AG  P  A+ PNA G+                                        Y+ +GN WEW  GG+  KR LRGGSFVD    S     NH +   TRM+   DSGS N  FRC 
Sbjct:   35 PINGLLSPLVPIRGGSFLYGSTGVGDGEDVDDASARAPLRDGSKPARRQRVQPFSIEDAAVTNAQFRAFVRATGYKTDAERFRWSFALAPFLDAETLARADADGGLGRLRDAPHWVGVAGAYWRQPEGPRSSIRGREDHPVVHASYNDALAFCTWAGRRLPTELEWEFAARGRINDEPFPWGGDEDGGTL----NGWQGPFPDGNTRADGYAGTCPARAYAPNAYGL----------------------------------------YNTVGNVWEWASGGDDKKRPLRGGSFVD----SVDGRTNHPLRVSTRMDNAADSGSFNIGFRCA 317
[Close]
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Match: A0A7S2SNU0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNU0_9STRA)

HSP 1 Score: 226 bits (576), Expect = 2.880e-65
Identity = 143/371 (38.54%), Postives = 177/371 (47.71%), Query Frame = 2 
Query:  461 KAAEDVTDTAAANPAP-------KILSKQVPVEGATYSFGTE-----------YEGGGKGAGSPP------DGGLPRERVRVMDFAIDVHPVTNDLFATFVKDTGYVTEAENFQWSFVLEYLMDKETIR--ESDEGIGRVKASPHWMGVEGANWRHPEGPRSSLKGRASFPVAQVSWVDATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGEGREAQKPVFKVG--------NAWQGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVMQVRLLGICAIHVLLALPPQVYDMLGNAWEWVDGGEPAKRVLRGGSFVDYDPTSPPPPANHAITPGTRMETTQDSGSANTSFRCVS 1471
            KA    ++T  A P P       K LS QV + G  +++G+            Y+  GK A          DG L     RV  F+ID+  V+N  F  FV+ T Y T+AE F+WSFVLEYL  K+T+   + + G GRVK +PHWM V+GA WR PEGP SSL+GRAS PV  VS+ DA AYC WAGRRLPTE EWE AARGGL            +   F  G        N W G FP  N   DG  G  PV  F PN  G+                                        Y+M+GN WEWV+ G   +RV+RGGS++D          NHA+   +R     DSG  +T FRC S
Sbjct:   36 KAHRSQSETRDAEPVPLSEEEAAKTLSPQVKMSGGWFTYGSSIADEVEGESEAYDALGKEALKTGQKLFRRDGNLENTWARVKTFSIDITAVSNSQFQKFVRATKYKTDAEKFEWSFVLEYLASKDTVDAVDGESGYGRVKDAPHWMAVQGAYWRRPEGPGSSLRGRASHPVTHVSYNDAKAYCEWAGRRLPTEREWEHAARGGL------------EDEPFPWGSAALSNRMNGWTGDFPSANDLSDGFDGTCPVDTFLPNDFGL----------------------------------------YNMVGNVWEWVEAGSEQERVVRGGSYIDTIDGR----HNHALRVSSRQVVPPDSGGGSTGFRCAS 350
[Close]
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Match: A0A7S3YFE4_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YFE4_HETAK)

HSP 1 Score: 219 bits (557), Expect = 7.430e-64
Identity = 132/330 (40.00%), Postives = 175/330 (53.03%), Query Frame = 2 
Query:  509 KILSKQVPVEGATYSFGTEYEGGGKGAGSPPDGGLPRERVRVMDFAIDVHPVTNDLFATFVKD----TG--YVTEAENFQWSFVLEYLMDKETI--RESDEGIGRVKASPHWMGVEGANWRHPEGPRSSL--KGRASFPVAQVSWVDATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGEGREAQKPVFKVGNAWQGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVMQVRLLGICAIHVLLALPPQVYDMLGNAWEWVDGGEPAKRVLRGGSFVDYDPTSPPPPANHAITPGTRMETTQDSGSANTSFRCV 1468
            K L++ + + G  +  G+ Y GG +   +P DG  P +   V  F I+   V+N+ F  FV+D    TG  Y T+A+ F WSFVL+  + KE +   +SDEG+GR++ +PHW+GV  ANWRHPEG  S +  + +A  P   +SW DA AYC+WAGRRLP E EWE+AARGG   +       EA    F + N WQG FP++N+ EDG A  +PV AF PN  G+                                        Y+ +GN WEWV GG+P  RVLRGGSF+D    S     NH +   +R   T DSGS NT FRC 
Sbjct:   29 KKLTELIHLNGGDFLMGSSYVGGERDEVAP-DGSTPLKVKHVKPFQIEKCAVSNEQFKIFVEDVERTTGKPYQTDADKFGWSFVLDSTLSKEQLDFADSDEGMGRIQNAPHWVGVLKANWRHPEGEDSDVFKQDKADHPAIHISWNDAKAYCKWAGRRLPKEREWEYAARGGHDGLPYPWGIPEASP--FDM-NYWQGAFPRENTAEDGFATTAPVAAFAPNHFGL----------------------------------------YNTVGNTWEWVAGGQPEARVLRGGSFLD----SLDGAFNHPVMTSSRQLNTADSGSYNTGFRCA 310
[Close]
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Match: A0A7S2ME14_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ME14_9STRA)

HSP 1 Score: 214 bits (544), Expect = 8.820e-62
Identity = 121/296 (40.88%), Postives = 156/296 (52.70%), Query Frame = 2 
Query:  602 DGGLPRERVRVMDFAIDVHPVTNDLFATFVKDTGYVTEAENFQWSFVLEYLMDKETIRESD--EGIGRVKASPHWMGVEGANWRHPEGPRSSLKGRASFPVAQVSWVDATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGEGRE-AQKPVFKVGNAWQGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVMQVRLLGICAIHVLLALPPQVYDMLGNAWEWVDG---GEPAKRVLRGGSFVDYDPTSPPPPANHAITPGTRMETTQDSGSANTSFRCVS 1471
            DG +P    R+  F +D+  VTN  F  FV++T + TEAE +QWSFVLEYL   E + E D  +G GRVK + HWM V+GA WR PEG  S+L+GR + PV  VS+ D+ AYC WAGRRLP E EWE+ ARGGL     E E       P  +  N W G FP +NSK D +AG +PV  + PNA GV                                        Y+M+GN WEW +G   GE  ++ +RGGS++D          NHA+   +R   + DSG  N+ FRC S
Sbjct:    6 DGNMPNTWARIKPFGLDITTVTNTQFQKFVRETKFRTEAEIYQWSFVLEYLAAPEIVEEVDSPQGYGRVKDAHHWMAVKGAYWRRPEGIGSNLRGRGNHPVVHVSYNDSLAYCEWAGRRLPMEKEWEYVARGGL-----EDEPFPWGSDPRPEKCNGWTGNFPTENSKLDQYAGTAPVDFYEPNAYGV----------------------------------------YNMVGNVWEWTEGKRGGEEKEKAIRGGSYIDTINGE----YNHALRVSSRQMVSADSGGGNSGFRCAS 252
[Close]
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Match: A0A841Q492_9BACI (Formylglycine-generating enzyme required for sulfatase activity n=1 Tax=Salirhabdus euzebyi TaxID=394506 RepID=A0A841Q492_9BACI)

HSP 1 Score: 208 bits (529), Expect = 1.210e-59
Identity = 124/333 (37.24%), Postives = 159/333 (47.75%), Query Frame = 2 
Query:  521 KQVPVEGATYSFGTEYEGGGKGAGSPPDGGLPRERVRVMDFAIDVHPVTNDLFATFVKDTGYVTEAENFQWSFVLEYLMDKETIRESDEGIGRVKASPHWMGVEGANWRHPEGPRSSLKGRASFPVAQVSWVDATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGEGREAQKPVFKVGNAWQGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVMQVRLLGICAIHVLLALPPQVYDMLGNAWEWV------DGGEPAK-----------RVLRGGSFVDYDPTSPPPPANHAITPGTRMETTQDSGSANTSFRCV 1468
            K + + G ++  GT+ E      G P DG  P   + +  F +D H VTN+ F  FVK+TGYVTEAE F WSFV    + + T +   +   RV+ +P W  VEGANW HPEGP S+++ R   PV  VSW DA AYC+WAG+RLPTE EWEFAARGGL        G E         N WQG FPK N+K+DG+ G +P  +FPPN  G+                                        Y++ GN WEW       D G+  K           RV+RGGS++ +          +      R   T DS S N  FRCV
Sbjct:   40 KMIHIPGGSFLMGTDTE-----HGFPEDGEGPVRTIEIDPFYMDPHTVTNEEFQHFVKETGYVTEAERFGWSFVFYMFISENTAKNVQQ---RVQQTPWWWVVEGANWLHPEGPDSTIENRMDHPVIHVSWNDAQAYCKWAGKRLPTEAEWEFAARGGLEQKLYPW-GDELTPEGIHYCNIWQGNFPKSNTKQDGYVGTAPAESFPPNGFGL----------------------------------------YNVAGNVWEWCSDWFSKDVGKHEKKNPKGPPTGDTRVMRGGSYLCHHTYC------NRYRVAARTSNTADSSSGNIGFRCV 317
[Close]
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Match: F0XYZ8_AURAN (FGE-sulfatase domain-containing protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XYZ8_AURAN)

HSP 1 Score: 203 bits (516), Expect = 3.590e-59
Identity = 112/241 (46.47%), Postives = 130/241 (53.94%), Query Frame = 2 
Query:  602 DGGLPRERVRVMDFAIDVHPVTNDLFATFVKDTGYVTEAENFQWSFVLEYLMDKETIRESD--EGIGRVKASPHWMGVEGANWRHPEGPRSSLKGRASFPVAQVSWVDATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGE----GREAQKPVFKVGNAWQGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVMQVRLLGICAIHVLLALPPQVYDMLGNAWEW 1306
            DG       RV  F ID   V+ND F  FV+DT Y+TEAENF+WSFVLE      TI +SD   G+GRV+ASP WMGV GA WR PEGP SSL+GR   P   +SW DA+AYC+WAGRRLPTEVEWE AARGGL     E E    G     P  ++ NAW+G FP +NS  DG  G  PV A+ PNA G+                                        Y+ LGN WEW
Sbjct:   16 DGAKAASHRRVPAFRIDPTAVSNDQFKRFVRDTQYLTEAENFRWSFVLELTASNATINQSDAKNGLGRVQASPWWMGVFGAYWRKPEGPDSSLRGRGDHPATHISWNDASAYCKWAGRRLPTEVEWEMAARGGL-----EDEPFPWGDADHDPWTRL-NAWEGEFPDENSARDGFVGPGPVDAYAPNAFGI----------------------------------------YNALGNVWEW 210
[Close]
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Match: A0A2T6B9F6_9BACL (Formylglycine-generating enzyme required for sulfatase activity n=1 Tax=Melghirimyces profundicolus TaxID=1242148 RepID=A0A2T6B9F6_9BACL)

HSP 1 Score: 204 bits (520), Expect = 2.730e-58
Identity = 127/334 (38.02%), Postives = 158/334 (47.31%), Query Frame = 2 
Query:  521 KQVPVEGATYSFGTEYEGGGKGAGSPPDGGLPRERVRVMDFAIDVHPVTNDLFATFVKDTGYVTEAENFQWSFVLEYLMDKETIRESDEGIGRVKASPHWMGVEGANWRHPEGPRSSLKGRASFPVAQVSWVDATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGEGREAQKPVFKVGNAWQGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVMQVRLLGICAIHVLLALPPQVYDMLGNAWEWVD----------GGE-----PAK---RVLRGGSFVDYDPTSPPPPANHAITPGTRMETTQDSGSANTSFRCV 1468
            K V + G  +  GT  +     +G P DG  P   V++  F ID H VTN  FA FVKDTGY TEAE F WSFV  Y + K+T ++  +    V+ +P W  VEGANW  PEGP S++  R   PV  VSW DA AY +WAG+RLPTE EWEFAARGGL   T    G E         N WQG FP  N+KEDG+ G +P  +FPPN  G+                                        Y+M+GN WEW            GG      P K   RV+RGGS++ +          +      R   T +S + N  FRCV
Sbjct:   41 KMVYLPGGEFLMGTNEK-----SGFPADGEGPVREVKIDPFYIDSHAVTNAQFADFVKDTGYKTEAEQFGWSFVFYYFLSKQTAKQVKQ---MVQGTPWWCVVEGANWYQPEGPDSNIDQRMDHPVVHVSWNDALAYSKWAGKRLPTEAEWEFAARGGLKQNTYPW-GNELMPNGEHYCNIWQGKFPGKNTKEDGYVGTAPAVSFPPNGYGL----------------------------------------YNMVGNVWEWCSDWFSRSIHERGGRENPQGPEKGTARVMRGGSYLCHKSYC------NRYRVAARTSNTPESSTGNIGFRCV 319
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig626.14018.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FPR0_ECTSI4.090e-12460.32Sulfatase-modifying factor 2 n=1 Tax=Ectocarpus si... [more]
A0A7S2Y1G9_9STRA6.500e-7341.07Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A8J2SID5_9STRA1.160e-7245.36Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]
A0A8J5XF83_DIALT1.480e-7041.09FGE-sulfatase domain-containing protein n=1 Tax=Di... [more]
A0A7S2SNU0_9STRA2.880e-6538.54Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3YFE4_HETAK7.430e-6440.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2ME14_9STRA8.820e-6240.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A841Q492_9BACI1.210e-5937.24Formylglycine-generating enzyme required for sulfa... [more]
F0XYZ8_AURAN3.590e-5946.47FGE-sulfatase domain-containing protein (Fragment)... [more]
A0A2T6B9F6_9BACL2.730e-5838.02Formylglycine-generating enzyme required for sulfa... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig626contigH-paniculata_contig626:19000..29071 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score372.1
Seed ortholog evalue3.2e-100
Seed eggNOG ortholog2880.D7FPR0
KEGG koko:K13444
KEGG Pathwayko04142,map04142
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Formylglycine-generating oxidase activity
EggNOG OGs2QVDG@2759,COG1262@1
Ec32 ortholog descriptionSulfatase-modifying factor 2 precursor
Ec32 orthologEc-20_001020.2
EC1.8.3.7
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons7
Model size1474
Cds size1158
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig626.14018.1prot_H-paniculata_contig626.14018.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig626 19000..28755 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930714.5504227-CDS-H-paniculata_contig626:18999..191011622930714.5504227-CDS-H-paniculata_contig626:18999..19101Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 19000..19101 -
1691481419.3488624-CDS-H-paniculata_contig626:18999..191011691481419.3488624-CDS-H-paniculata_contig626:18999..19101Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 19000..19101 -
1622930714.5615375-CDS-H-paniculata_contig626:19137..192831622930714.5615375-CDS-H-paniculata_contig626:19137..19283Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 19138..19283 -
1691481419.3586342-CDS-H-paniculata_contig626:19137..192831691481419.3586342-CDS-H-paniculata_contig626:19137..19283Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 19138..19283 -
1622930714.5730913-CDS-H-paniculata_contig626:19415..196901622930714.5730913-CDS-H-paniculata_contig626:19415..19690Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 19416..19690 -
1691481419.371798-CDS-H-paniculata_contig626:19415..196901691481419.371798-CDS-H-paniculata_contig626:19415..19690Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 19416..19690 -
1622930714.589711-CDS-H-paniculata_contig626:20089..202931622930714.589711-CDS-H-paniculata_contig626:20089..20293Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 20090..20293 -
1691481419.384222-CDS-H-paniculata_contig626:20089..202931691481419.384222-CDS-H-paniculata_contig626:20089..20293Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 20090..20293 -
1622930714.6036603-CDS-H-paniculata_contig626:20821..209321622930714.6036603-CDS-H-paniculata_contig626:20821..20932Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 20822..20932 -
1691481419.3936074-CDS-H-paniculata_contig626:20821..209321691481419.3936074-CDS-H-paniculata_contig626:20821..20932Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 20822..20932 -
1622930714.6217284-CDS-H-paniculata_contig626:22561..226711622930714.6217284-CDS-H-paniculata_contig626:22561..22671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 22562..22671 -
1691481419.405231-CDS-H-paniculata_contig626:22561..226711691481419.405231-CDS-H-paniculata_contig626:22561..22671Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 22562..22671 -
1622930714.637967-CDS-H-paniculata_contig626:28545..287551622930714.637967-CDS-H-paniculata_contig626:28545..28755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 28546..28755 -
1691481419.413787-CDS-H-paniculata_contig626:28545..287551691481419.413787-CDS-H-paniculata_contig626:28545..28755Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig626 28546..28755 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930714.6581085-UTR-H-paniculata_contig626:28755..290711622930714.6581085-UTR-H-paniculata_contig626:28755..29071Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig626 28756..29071 -
1691481419.422129-UTR-H-paniculata_contig626:28755..290711691481419.422129-UTR-H-paniculata_contig626:28755..29071Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig626 28756..29071 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig626.14018.1

>prot_H-paniculata_contig626.14018.1 ID=prot_H-paniculata_contig626.14018.1|Name=mRNA_H-paniculata_contig626.14018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=386bp
MSLWRRPETVYQPKSTNGATSVTMRLFRSRYGANSLVTTILLIFSAMTKA
AEDVTDTAAANPAPKILSKQVPVEGATYSFGTEYEGGGKGAGSPPDGGLP
RERVRVMDFAIDVHPVTNDLFATFVKDTGYVTEAENFQWSFVLEYLMDKE
TIRESDEGIGRVKASPHWMGVEGANWRHPEGPRSSLKGRASFPVAQVSWV
DATAYCRWAGRRLPTEVEWEFAARGGLMHMTGEGEGREAQKPVFKVGNAW
QGLFPKDNSKEDGHAGLSPVFAFPPNALGVSLHFFLRYFCFCFCYGGTVM
QVRLLGICAIHVLLALPPQVYDMLGNAWEWVDGGEPAKRVLRGGSFVDYD
PTSPPPPANHAITPGTRMETTQDSGSANTSFRCVST
back to top

mRNA from alignment at H-paniculata_contig626:19000..29071-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig626.14018.1 ID=mRNA_H-paniculata_contig626.14018.1|Name=mRNA_H-paniculata_contig626.14018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10072bp|location=Sequence derived from alignment at H-paniculata_contig626:19000..29071- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGTGTGTCTAGCCCCATCGCTGTTGATAGGGTCGTCACGGGTAGTTTGTC
ACTCAGTGAGTGCATTAGTACAATCGCCTTTTGCATCCAACTACTTGACA
AACCTACTAAATGTTCACACACATCTACAAGCTGCGGTGAGCTTTTAGTA
GTCTGGGTCAGTTCACGCTTATCGTGGGCTTCGCTACTCCCGAGGGCAGT
TGTGCGCATAGTACAGAAGGAGTCCACATCGGTTAGTCTGCCTCGCAGCA
GAGTCGGGCTAGCTCCAGGTGCTGTGGATGAAAGCCGAGGATAGTAATAA
ATTTTGATAAATCAACATGTCCTTGTGGAGAAGACCAGAGACGGTGTATC
AACCGAAGAGTACAAATGGTGCAACCAGCGTGACCATGCGACTATTCCGA
TCACGGTATGGTGCAAATAGTCTCGTAACGACGATTCTGCTGATATTCTC
CGCAATGACAAAAGCAGCCGAAGACGTTACCGATACGGCCGCGGCCAACC
CTGCACCCAAAATCCTCTCAAAGCAGGTGAGACAGGTTGAACAGACAGTG
TGGTGCTTAGTAAGGACGTGTACTGATATGAGTGCATGAACGTTGGCAGC
CATAGCATAGTATGGTCAGTAGCATCCTGCAATTGCTAGGATTTTGTATT
GGTATTTCAAAATATCCATTTACATTAATTAGGTTTATGGACTTCATACG
AGTATTGGGCTGAGTAAATTTAAAGCGTCAAGCGCCGAATGAGCGCGTTA
GCACGAGTATGCGAGGGTTGAAGCCGCAAATCTCAACGTCCACCCCCCTG
TTGGGGAGGGGGCCTCGCCTGAGGCCGAAAAAACACGCGCTTGGGCTTCC
TCTCTATTCAAAATGCCACTGTATTATATATTACATTGGGGGTACTGATA
TGGTGCGGTGGAGTATCAGGCGATCTTGATCGGAACCCCGCATTCTAGCG
GACGAAAGAATTGTGCAATACCGACCAAAGTCCTGCACAACTGACAGTGC
TCTCAACCCTTTTGATCAGTACGGTATAGAAATCGGGGAAAGGGGTAGGT
CGTAGGATATATATTACAGTCTATATACCGGGTTTAGTCAGCCTGGCATA
TCGCAGACAAAATATATATGGTACATGTTAAAATTGCTCAACAGCTAAAG
AGCCAGTATGCCAGTATATCACAGGTGAATTACCATGCGTGTGCAGAGCT
ATTTTGATATTATATATCTCGATATAATGATACTGTCACGTTACAATTCA
ACACAGCGACTTCAGGCCGTCACAGTCAGGTATATGGCATTTTTATACCG
CAGTAGAACCAATCAATGAATTTGTTAACTAGCTTACAAGTTCGTTTTAC
TGTACACGGCATTCTTTTGAAGGTCATACGAGTATTTCCTGTAATATGCG
CAACACAAGTAAAAACAAAAAAGCGAAACTTCCACTGAAGAATAACGAAG
AAAAGTATCGGCGCCAATGAACTGTGAAATGTTAGTCTTGTAAATACACT
ATTTCTATACTACTGCTTGCCATAATTGAGATGACAAAATAACAGGCTTA
TGTCTACGCAGTTCAAACAAAGAAGAAAATCGATACAAGCATTCACGATG
TCACCCCGCCCCCTTCCTCGGCCACTATATCCACAACATCTTGGCCCTGT
CCCTATTAAGATTAAAGATCTCCCCTGCGCCTGCCGCCTGTGCTTTGGCG
GCTTGCCGCCACGCCTCCTCTTGTCTTGCGTTGATCTTGGCCATTCTCCT
GTTGATGAATTTTACCTCCTTGATGCGGCGGAGTTGAGGTGCAGGAACAC
CATCTTGCGCATGCGCTCGGGGTCCATTCCGCGTCTCAGCTTGTTGAGTG
TAGTCGCCAGGACGGAGAAGTCCCGCTCCGATTGGCAACTAGTGCTGTCC
ACACAGAGATAAACCCGTGCCAGTGCAGACAACAGTGGCAACTTCGGGCC
CTCGACTGCGACGCCGTCTTTGTCGAACATGGACTTCCCCGCAGACCGCC
AGCAGTCAACGACGTCCAAGTGAGCCGCGGTAGACGGCGGAATTTGGGCG
TAAGCCACCATCTCGTCCCCTAGCGGACAGAGACGGTCTTGTTGGACTCC
CCCCGCTAGCTGCGGGTGGCCTTTTTGATGGCGGCGTTACGGCTAGCCTC
ACGCTATTCAAACAGGCCCCGTGGGCGCTTCGGTGCAGGCCCCGTGGGCG
CTTCGGTGCAGGCTCCGCAGCGCCGCTCGTCGCATCATCAGCAGGAGCCG
TCTCCCCGCGAGCCAACTCACAGTCCATTGATTTGCCTAACCCCACCAGC
ACCGCATATGCTTAATCGCGCAAAGACACACAATCTGTTACTGTCGGCCG
GGATATCCCTGTTCCCGCACACCGTCAAGTCGAGTGTTTTGTAGCGTGGG
TCGAGGTAAAGCGCGAGGACCTCGACCTCACTGAAAGTCATGTGCACCTT
GCGATCCGTCAGCTGTTTGATGCAGACAGACACGGTCGTTTGCACTGGGG
CTTACAGTCCGCTGACGCACTTCCACATATTGACCCGCGGCTCGTCCCCC
TCCTTAGCCTCTCTCATATTCTTGAAGTCGACCAGCTGGTGCAACAGGTA
GATGAACCGGTTGAGGATGCTGTCATTGCCGCCCTGGATGCCGATCGTCA
TGAGGTTTTGTGTACTCCAGCACGCAGCAGACCTCCTTCATCACCAGCCA
GTCGTTAGGCGAAAGCCCGCGGTGGGCATTTTAGAGGTTTTCGCGGAGGT
ACTCGGCGATGGGCTTCTCGGGGGTGATCAAACGCACCAAGAACGCAAGC
TGCGAAGCCCACCTGGCATCAATCATGGCATACACGCGGCGGTGTCAACA
ACGACAGGAATATTGATATTGAACATTGCTACTGGAGTGTACATGTATAC
TTTCAGGCGCAATCAATTCATGAACAACCTAACAAATATCAAATATCTAC
ATAACATTACCAATCGTCGCGAAACATCTACTTTACCAAATCCCCAAACG
TCTTTCAAAATCGAGTGCATCAGCTGTCTAATAACTGGAGCTGACACAGC
ATCAAATGCAAAATATAAAACACAGAATGCCGACTCTACAAAACATTATC
GAAGATACAACGATTTTGAACAGTATAACCCCTAATGCCATTTCTCGTTG
GCTTCGTTGTGGGTGCCAGGAACACGCTCGTTGCCAAACTGACGTGCTCC
ACCTTTGTGCTGTCGGGAAAAACCACTGATGCTGACGCTGTGCAGAAGCC
CTCGGTGTGCTCGATCTTGCAATGACTTGAGGGCCTCGATCACCTCTTCC
TTGTCGAGCGTCGATTTTGCTGGAGTTGTTCCAGCGCAATCCGGCGCAAA
CTCGGTGATGAGCATCTTGAGGTCCACATCGCCGAGGGATTCCCACGGCC
GACCGTTGAGGACGCGCCATAGGACGAGCTTGCGGTTCAGGTGGTCGCGG
TTTGCCGATGTGAATACCGACCTCTTTCTGCCGACAATCGGATAGACGGG
GATTCCCAGAGCTCTTGCCTGCTGTAGTCGAACACACACAAAAAAAAAGA
ACAAAGCAAAGAAAAAAACCCCAGCGAATAATAAGGTCATGAAGAAGAAA
AGCACAAGCAAGACAAGAGAGCTGGTCGTGCTGCCGCTGTGTACTGCTGT
TTACTGGTCCGCACTGTACCATACAAAGGGTGATTTTTATATGGCGTGTT
TTTTACCTTGGAATCTTCTATCTTTGGACCACGGGTTGATGTGAAGATTG
AAAAAACGCCCAGTACAGAACTTGGATTGTACTGTACAGTAAGTATATAT
ATTCATGCGGATTTAGTGTACAACTACTGTAGTGTACACTACAATGATTT
TTTCCGACCATAAGAAGCGGCCTGACAGACATCAACACGAAATTGCCATG
TAGAGTACTAACAACTTATTCGGTTGTACTGCTGTGGACTCTATAGTTCT
TTATTTGTGCATCTAACTTTCAAAAACACAATACATCTGCTTGCGTTCCT
TGTGCAGTGCCTGTCGATGCTGAAGCCCACCCCCAAGACGCTCCCCCTTT
GTCGCTGTGATACGATGGAGTATGAGCTCGCCGCCACAGCCAGGGCGTAC
TGCTCCTTGTGGATTCTATTCCTGTGTTGGGACATAGGATCCGTGCTCCG
TGCAAGAGGTGGCCGCACTGTTTTCCCCGTCGCCAAAACTTCGTAGATAA
TCTTCTTGCCGTTTTCCAAGACAGAAAAGAAGTGACAATTGACACAGCGG
TGACAGTTTGCCGTTACGCAATTCGGTGGCGATGTTGACCTTCCTCTGTA
CAACATTTTCGATCATAATCGTATCCGGTTGATGAGAGGCGTGTCTCGCA
CCACTGGTTTTGTTTGGGATTCCGGTAGATGCTGGCGCTGCAGGAAAGGG
CCCAGACCGGGCGGAGTCGACGGCATCCTCTGCTGCTGGACACGCCGACA
CCGCTGCCGAGTTCATCCTTCTTGTACTTCTTGTAATATTTGTCCTTCGA
CGTTACTATGTGGTTGTACTGTTAGGATATATAGCATGCGATGATGCCAG
CGGCGGTGGAAACATGTTGCGATCATATGTGTATTGAGCTAGAATCTAGA
GTTCAATTATGTAACGTTAGTGACATTACTTTGTACGTTACAGAAATTGT
AATGTACAGTTGAACGTTACACCTTTACGCAATAACATTACAAACAACGT
TATTCTAACGTCTGGAAAATTCAGACGTGACGGTACGTCACGCCACAAAC
GTGATGTTAACGTGACGTGTAACGATATGTAACGTGTAATGTAGAGCATC
CTGAAAAAAAGGGGACGGGCGTGTATCACACATTTACAGTCAGAACTGTA
CCCAAATGTCTTGCACCAATATGTTGCACTCACGACGGCATCGCTGCAGT
GCTACACAGTACAAGAATAGCACCTCCACTATACTAACGTAAATTATCGA
ATGTCTCGCTGCCACTTGGGTTTTGAGGTGTGCGCTCCGAGAAAAGACAT
CCTGGCCTTGCGCAAATGTTGCACAGAACATTGATGAAGGTGTGGAGTAG
AGCTCAGGGCGTTCCGCCCTCAATGAGTTGCTGTCGAAAGGAGTCATCTA
CGCCTGTATAGTGCGGTAACCTCACTACAGTGGATTGGACCCGTGACAAG
TGATATTCAGAATGATAGGAGGATACAAATGGGTGGCATTGCTTGTATAG
TAGGGATTCATCCTCTATTACCTTGTATCCAGTGCAGTCGACGTTCCGGT
AGCCTATTGAACGCATCAACTTTTTTCTAGAAAATCTAACGCGGAACGAC
CAATTGCGTTATCATCATGATATGCGTGACGTGGTAGTACCCACCAGAAA
TAGCAGGAGGCAGCCTACCACACAAGTCGTAGCAGTCGGAACATTACGAT
AGTGAAGCATGCAGACCTCCCTTGCGCCGCGGGGAAACGATGCAAACTCT
CCGAGTGTTGAAAGTGCAGTTTCGTGGCAATTTTGGCCGTCGACAAACAG
AGCATAGCGCAGTTAACCTTGTGCTCTTTTGTAAGAAGTGCGACGAGGAC
ACGCTAGAGACTGATTTAACAGCAGCATCGATGTAGTGGGCTCAGTGTCG
TGGCTATGCGCAGGATGAGGCTAGTAAAACCTCATATTCATGCATACACG
CGTTGTTGGTATTGGGTGGCACACAGCGCAACAGTCCCTGCGTAGCCTGC
ACGGCAACGGATGTCGTACCGGCTGAGACATCAGTCTGTTCTCGATATGT
ATCGGCTGAACATAATTCGTGGATATAATATGCCGATATGAATCCCTCTG
TTTCGTTGACGATATCCAGTTGTTCTGTCCCGATCGGGGTGTGTGTCATC
CGTACTGCAGGTCGTGGAAAGGTTTATATATATAAAACAAGAAGAAATGA
TCTCATGTCGGGGCCTTGGTACTGCAAACATGGAAATTAGAAAGGACGGT
GTGGTTCGTCCTGGCCACTGTGTGGGATGGTGGTGTCAGAACACTTACCA
TACAGTCTGGTGTGATATATTGTATTTGACCATCATCCAGTTCAGGGAGA
GTGGTCTCTAACGCAGGTGTTATATGTAACGTGAAGCTAAAATATTGTGT
ACAACTACGGTACCGTGCTGCCTGTCCTCCAACTGGAGGGGTATGATAAT
ATATAGAGATATATACATATAATATAGAAGCGGGGCCCCATTTCCTAGTA
TCTGTATGCAAACGTTGGCTTTTCTGCACAAAATGATTATTGTGATGCAA
ATATGTTTTTGTAGGGATTCTGCGGATCTGGCAGGATCCTATGGCAGATG
CGCTGATAGGATTAACTCATCGGCTGACACGGCCACTCGTACTGACTCTT
TCGCCTTGCTGATTCGTTGGTATATACTGCAATGGTACCATATAATACAG
GTCCCCGTCGAGGGAGCTACCTACTCTTTCGGAACAGAATATGAAGGTGG
AGGCAAAGGGGCAGGTTCCCCCCCTGATGGCGGGTTGCCACGCGAGCGAG
TCCGTGTTATGTGAGAACACAACACGGAACAAATGCTGGACATAATATCC
GACTATATACTTGAATTGCCAGCGTATTCCGGGATAGACATCGCATAGTC
ACGCACGAATCCCCTGTGCCCACATACCATTCCGTGTTGTTGCTCCCACT
ATTGGTAGAGATTGTTGAGGGCAATATGGGTAAAACTTCAAATTATTTTG
TTGGGAAAGTTTCCCTTGGAAGAGCGTAACTTGAAAGAAGTTATAAAAAT
TCTCCAAGGAGAGTATCGTAACTGTAGCACATTTGTAGTGTGGTGGTTTT
TAGGCCGTCGTACTGCTGATGATATAAAATTCTCTGTATTTGATTTGTTG
ATACTGTGAAATTCTCCGTATATTTATCGAGTACTCGAAATTGACATTGC
TATTAATTTCCGAGTATTGTAGCAGTCCATGTGGTGGTACTGAAGCGTAT
TGCCAGCACCGGAACTGCTCACTACTCGAGAGTATTGACGGGTACGAAAA
GTCCTCGGTTAACCCGATGCCTGAAATACCAAGGAGTTGTCGGTACAGCT
TCAAACTTAGGGTGCGAGCTATATGTACTGTTGTCGCTTTCATACTTCAA
GGACTTCCTTTTGCCTGGACACCCTAGCTTTCCCTCAGACCCTTTCATGC
TGCACAGACCCTTACAGTGCGACCAGCTCCACCTGTGGTTGCAATCAAGT
ACCGGCTTTGCGCGTTTGGCGTATCGATTTACAACGAAGACGTGTTCAGT
TTTTCCGGTTGGTATTTCGTGGCACAAAGAGTTCCTCGCCATCGCTCCAC
GTATTACAGAGGTGTCGCCCTGGGTATTTGTACTTGCATTTCTTGTTCTG
CCTTGTATCAAACGTCTTATGTGATTGCCCAGATCCTGCATGCTCGAGCA
GCAATGCTGAGCTGAAGCATTTTCGTTAAAACAAGTAGAGTGGGTGTGGG
TTTGGTGTGGTTTACCTCCCTCTATACATTCTCTTGCAGGCCACAATGGA
AGGGACAAAAATTGCGCGATATGCGGCCTGTTGTACATGGTATACTCACA
TGACATCACCACTTGGACTTTCATCCAGTGTGTACACTGTGCATGCCCCG
ATTTGGGGATATCAGATTTTATGATACAGCAATCGACAACGTTTGTGGAG
TCGACACTGGTGGTACTATGAATTACTCAGCACTATCGCTACTGTTGCTA
CTGTTGAATAACCAGTATTTCGGGCATTCGACACTGGCAGTACTATCAAA
TATTCAGTATGTCAGCGTTGGTTGATGTTAGTCGTTCTTGGCGTATTGAG
TACTCACAGCACTTTCGGGGCACTAGGATATTGGCATTCAATACTGGCGC
TACTATCAAATATCCAGTATGTCAGCGCTGGTTAAGGTCAGTCGTTATTG
GCGTAATGAGTACCTACAGCGCTTTTGGGACACTCGGATACCGGCAATAC
TGTAAAACACTCGGTAATTTCAGCGGTCGGGACTGGCGGCACGGGAGCGC
TTTGACCAGTAATAGAGAGCGCTGCAAGTATGTATGGTACTGTACTTTCA
GCACCTTTGGAATTTTTCAAACGAATATCCGCAGCGCTGGTAGGCGGTCG
TGCTATTCCTGACTTCCTCTTTGCTCCTTCGGCTTTCAGGGATTTCGCCA
TTGATGTACACCCGGTGACAAACGACCTCTTCGCCACCTTCGTGAAGGAC
ACCGGCTATGTGACCGAAGCCGAGAACTTTCAGTGGAGTTTTGTGCTAGA
GTGAGTACGATGTTCTTGTATCCTGTTGGGCTCGAGCTTGATGTTCTTTA
CTTTCGGCACAAACCTTTGCTTGTTTCACAAGCAACGGCTTGAACTTGTT
CCCTTATAATCTAAACCAGGTCTATCTAAGCCACGTTTTCCCCCCGTACA
AATACGAATGTAAGATACCAATAGATAAGAGAAATTTGCAATTAATACTG
GATCTATTTGAGTTGGGGAAGATGTCCATGTGACGCGAAGAATGTGCAGT
GTACTCGATATAGCATGGAGCATCGAAAAGTTTGAGCAGATGAAGTATTC
AATCTGGACAGCATCATCCCGAAAATAAACAGAACCTGCATGTGTGACTG
TTCGCCGGGTATACGAACATTTGGTGACCATCTGTAGAGTAACCGTTCAT
AGATGTGTAAACGAATAAATACATGTTTACCCAAGACAAATAATAATAGT
TCGAAATAGTTACGAATGCTCCATTCGTATTTGTCCGGGGGATGGCTACG
TTATACCTCCAACCTCTTGCTGAATCAGGTACCTGATGGATAAAGAGACG
ATACGCGAATCTGATGAAGGGATCGGCCGCGTCAAGGCATCGCCGCATTG
GATGGGGGTGGAGGGCGCAAACTGGCGGCACCCAGAAGGGCCTCGTTCTT
CACTGAAAGGGCGAGCAAGTTTTCCCGTGGCGCAGGTTTCATGGGTGGAT
GCAACCGCTTATTGTCGATGGGCTGGCAGGCGGTGAGTTGCTGGGGAGAA
TGCATTATTAATCAAGGCGTTCTTGTCTGAATAATTGGCCCCATGATCCC
CCTGTTTTGCTGTATGCAGGACACAAACTTGTCACGTTGAAAGCGTGACC
ATCGTGACTTCACCCCATGAGGGAGTTTAACAGGGGGAATGCCCGTCTGC
TTGACAAATTGAGCAAGTACATGTAATGGTTGTTGGGGTTTTTCAAGTGC
AGCGACGGGATGTGTGTTGGACGTTAGCTTGTGATATTCCAACTTGCTTC
CAGTACATCCCAGTGAGGCCAAGTCGTCAAAGTACATATCTGTTTCTTGC
ACTCGCCACATCTTCCGATAATCGGCGTTCTAAACCTCACCGACATGTTT
GCCAATATTTACACCCCACTCATTATTACAGCCTTCCGACTGAGGTAGAG
TGGGAGTTTGCAGCACGCGGCGGCCTCATGCACATGACAGGCGAAGGAGA
GGGTCGGGAAGCGCAGAAGCCCGTATTTAAAGTTGGGAACGCTTGGCAAG
GTTTATTTCCAAAGGATAACTCGAAGGAAGATGGACATGCAGGTCTATCT
CCTGTTTTTGCGTTTCCACCAAACGCCCTTGGGGTGAGTCTTCATTTTTT
TTTACGTTATTTTTGTTTTTGCTTTTGCTATGGTGGTACTGTAATGCAGG
TCCGATGTCCTTCTCTTTTGACGGCGATATATCTGCCGAATGCGATTCGC
TTAACTTTCGTTAGCGAGGTGGCGAAATGATAGTGACGCCAGTGACGGCG
ATATATTTGTGATTGTCTCCCGCATGTATATGTGTGAGTGTTAGGCATCT
GTGCGATTCATGTCTTACTTGCATTGCCACCCCAGGTGTATGATATGCTC
GGAAACGCGTGGGAGTGGGTCGATGGCGGAGAACCCGCAAAACGAGTGCT
TCGCGGGGGTTCCTTTGTCGATTACGACCCCACCGTGCCACCCGCGGAGA
AAGGGGGGAAATCGAAAAAGTCGCCGCCACCTCCAGCAAACCATGCGATT
ACGCCAGGAACGCGCATGGAAACGACCCAAGACAGCGGAAGCGCTAACAC
ATCGTTCCGATGCGTTTCGACT
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig626:19000..29071-

>mRNA_H-paniculata_contig626.14018.1 ID=mRNA_H-paniculata_contig626.14018.1|Name=mRNA_H-paniculata_contig626.14018.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2316bp|location=Sequence derived from alignment at H-paniculata_contig626:19000..29071- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCCTTGTGGAGAAGACCAGAGACGGTGTATCAACCGAAGAGTACAAA
TGGTGCAACCAGCGTGACCATGCGACTATTCCGATCACGGTATGGTGCAA
ATAGTCTCGTAACGACGATTCTGCTGATATTCTCCGCAATGACAAAAGCA
GCCGAAGACGTTACCGATACGGCCGCGGCCAACCCTGCACCCAAAATCCT
CTCAAAGCAGATGTCCTTGTGGAGAAGACCAGAGACGGTGTATCAACCGA
AGAGTACAAATGGTGCAACCAGCGTGACCATGCGACTATTCCGATCACGG
TATGGTGCAAATAGTCTCGTAACGACGATTCTGCTGATATTCTCCGCAAT
GACAAAAGCAGCCGAAGACGTTACCGATACGGCCGCGGCCAACCCTGCAC
CCAAAATCCTCTCAAAGCAGGTCCCCGTCGAGGGAGCTACCTACTCTTTC
GGAACAGAATATGAAGGTGGAGGCAAAGGGGCAGGTTCCCCCCCTGATGG
CGGGTTGCCACGCGAGCGAGTCCGTGTTATGTCCCCGTCGAGGGAGCTAC
CTACTCTTTCGGAACAGAATATGAAGGTGGAGGCAAAGGGGCAGGTTCCC
CCCCTGATGGCGGGTTGCCACGCGAGCGAGTCCGTGTTATGGATTTCGCC
ATTGATGTACACCCGGTGACAAACGACCTCTTCGCCACCTTCGTGAAGGA
CACCGGCTATGTGACCGAAGCCGAGAACTTTCAGTGGAGTTTTGTGCTAG
AGGATTTCGCCATTGATGTACACCCGGTGACAAACGACCTCTTCGCCACC
TTCGTGAAGGACACCGGCTATGTGACCGAAGCCGAGAACTTTCAGTGGAG
TTTTGTGCTAGAGTACCTGATGGATAAAGAGACGATACGCGAATCTGATG
AAGGGATCGGCCGCGTCAAGGCATCGCCGCATTGGATGGGGGTGGAGGGC
GCAAACTGGCGGCACCCAGAAGGGCCTCGTTCTTCACTGAAAGGGCGAGC
AAGTTTTCCCGTGGCGCAGGTTTCATGGGTGGATGCAACCGCTTATTGTC
GATGGGCTGGCAGGCGGTACCTGATGGATAAAGAGACGATACGCGAATCT
GATGAAGGGATCGGCCGCGTCAAGGCATCGCCGCATTGGATGGGGGTGGA
GGGCGCAAACTGGCGGCACCCAGAAGGGCCTCGTTCTTCACTGAAAGGGC
GAGCAAGTTTTCCCGTGGCGCAGGTTTCATGGGTGGATGCAACCGCTTAT
TGTCGATGGGCTGGCAGGCGCCTTCCGACTGAGGTAGAGTGGGAGTTTGC
AGCACGCGGCGGCCTCATGCACATGACAGGCGAAGGAGAGGGTCGGGAAG
CGCAGAAGCCCGTATTTAAAGTTGGGAACGCTTGGCAAGGTTTATTTCCA
AAGGATAACTCGAAGGAAGATGGACATGCAGGTCTATCTCCTGTTTTTGC
GTTTCCACCAAACGCCCTTGGGGTGAGTCTTCATTTTTTTTTACGTTATT
TTTGTTTTTGCTTTTGCTATGGTGGTACTGTAATGCAGGTCCGATCCTTC
CGACTGAGGTAGAGTGGGAGTTTGCAGCACGCGGCGGCCTCATGCACATG
ACAGGCGAAGGAGAGGGTCGGGAAGCGCAGAAGCCCGTATTTAAAGTTGG
GAACGCTTGGCAAGGTTTATTTCCAAAGGATAACTCGAAGGAAGATGGAC
ATGCAGGTCTATCTCCTGTTTTTGCGTTTCCACCAAACGCCCTTGGGGTG
AGTCTTCATTTTTTTTTACGTTATTTTTGTTTTTGCTTTTGCTATGGTGG
TACTGTAATGCAGGTCCGATTGTTAGGCATCTGTGCGATTCATGTCTTAC
TTGCATTGCCACCCCAGGTGTATGATATGCTCGGAAACGCGTGGGAGTGG
GTCGATGGCGGAGAACCCGCAAAACGAGTGCTTCGCGGGGGTTCCTTTGT
CGATTACGACCCCACCTGTTAGGCATCTGTGCGATTCATGTCTTACTTGC
ATTGCCACCCCAGGTGTATGATATGCTCGGAAACGCGTGGGAGTGGGTCG
ATGGCGGAGAACCCGCAAAACGAGTGCTTCGCGGGGGTTCCTTTGTCGAT
TACGACCCCACCTCGCCGCCACCTCCAGCAAACCATGCGATTACGCCAGG
AACGCGCATGGAAACGACCCAAGACAGCGGAAGCGCTAACACATCGTTCC
GATGCGTTTCGACTTCGCCGCCACCTCCAGCAAACCATGCGATTACGCCA
GGAACGCGCATGGAAACGACCCAAGACAGCGGAAGCGCTAACACATCGTT
CCGATGCGTTTCGACT
back to top