mRNA_H-paniculata_contig6253.14010.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Match: A0A6H5K7D8_9PHAE (CobW C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7D8_9PHAE) HSP 1 Score: 358 bits (919), Expect = 1.240e-114 Identity = 189/240 (78.75%), Postives = 213/240 (88.75%), Query Frame = 1
Query: 1 KVPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLADGDGLSAAEQVVVLDNGCMCCTVRGDLLGAFASVLHKMEDSTSK------GGGRALDSVLVETTGMADPVPIVRTLLQTPAIAGSFSLDGVVTLVDAKNLLSRLMDGEHELMTQEKQEEGPSDTVDEAFQQIMFSDRIVINKVDLVSASTAVDVYQRVRSINESAGIVSCSRGKLDPAELEGLGAFDRLLK 702
KVPVTILTGFLG+GKTTMLN+LLHVQR+KRIAVIENEFGEVPIDGDLLADGDGLSAAEQVVVLDNGCMCCTVRGDLLGAF+SVL KME++ + G GRALDSVLVETTGMADPVPIVRTLLQTPAI+ SF+L+GVVTLVDAKN+L RL +GE E + +EE +DEAFQQIMFSDRIV+NKVDLV ASTAV+V+QR+RS+N +AG+VSCSRGKLDP ELEGLGAFDRL++
Sbjct: 154 KVPVTILTGFLGSGKTTMLNHLLHVQREKRIAVIENEFGEVPIDGDLLADGDGLSAAEQVVVLDNGCMCCTVRGDLLGAFSSVLAKMEEAKAGAEGGGGGSGRALDSVLVETTGMADPVPIVRTLLQTPAISNSFALEGVVTLVDAKNILPRLQEGEGEEGGGKGEEE-----IDEAFQQIMFSDRIVVNKVDLVPASTAVEVFQRIRSMNGTAGVVSCSRGKLDPRELEGLGAFDRLMR 388
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Match: A0A7S4F3Q4_CHRCT (Hypothetical protein n=2 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F3Q4_CHRCT) HSP 1 Score: 276 bits (705), Expect = 6.950e-84 Identity = 151/230 (65.65%), Postives = 176/230 (76.52%), Query Frame = 1
Query: 1 KVPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLADGDGLSAAEQVVVLDNGCMCCTVRGDLLGAFASVLHKMEDSTSKGGGRALDSVLVETTGMADPVPIVRTLLQTPAIAGSFSLDGVVTLVDAKNLLSRLMDGEHELMTQEKQEEGPSDTVDEAFQQIMFSDRIVINKVDLVSASTAVDVYQRVRSINESAGIVSCSRGKLDPAELEGLGAFD 690
K+P+TILTGFLG+GKTT+LN+LLH QRDK+IAVIENEFGEVPID +LLA LSAAEQVVV+DNGCMCC+VRGD+LGAFAS+ +E G LDSVL+ETTGMADPVPIVRTL+QTP IA F L+GVVTLVDAKN+L+RL GE E S DEAFQQIMF+DRIV+NKVDLV TA+ V+ ++RSIN A ++ C RGKL P EL GAFD
Sbjct: 188 KIPITILTGFLGSGKTTLLNHLLHEQRDKKIAVIENEFGEVPIDNELLASK--LSAAEQVVVMDNGCMCCSVRGDILGAFASIFAAVE------AGNHLDSVLIETTGMADPVPIVRTLIQTPDIADRFRLNGVVTLVDAKNMLTRL--GETEDTAGHT-----SAAPDEAFQQIMFADRIVLNKVDLVQTDTALQVWHKIRSINNRADVLPCMRGKLHPDELVDFGAFD 402
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Match: R1C4A2_EMIHU (CobW C-terminal domain-containing protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C4A2_EMIHU) HSP 1 Score: 272 bits (695), Expect = 9.510e-83 Identity = 139/230 (60.43%), Postives = 178/230 (77.39%), Query Frame = 1
Query: 1 KVPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLADGDGLSAAEQVVVLDNGCMCCTVRGDLLGAFASVLHKMEDSTSKGGGRALDSVLVETTGMADPVPIVRTLLQTPAIAGSFSLDGVVTLVDAKNLLSRLMDGEHELMTQEKQEEGPSDTVDEAFQQIMFSDRIVINKVDLVSASTAVDVYQRVRSINESAGIVSCSRGKLDPAELEGLGAFD 690
K+P+T+LTGFLGAGKTT+LN+LL QR+ ++AVIENEFGEVPID +LLA L+AAEQVVV+DNGCMCC+VRGD+LGAF S++ ++ G LD+V++ETTGMADPVPIVRTLLQTP IA F+L GVVTLVDAKN+L RL + E+QE+ P DEAFQQ+MF+D IV+NK+DLV ++ A++V++R+RSINE A ++ C RG +DPAEL FD
Sbjct: 67 KLPITVLTGFLGAGKTTLLNHLLQTQRELKVAVIENEFGEVPIDNELLAQNK-LAAAEQVVVMDNGCMCCSVRGDILGAFTSIIDAVDS------GNGLDAVIIETTGMADPVPIVRTLLQTPVIASRFALAGVVTLVDAKNILRRLQE------LDEEQEDDPDAPPDEAFQQLMFADTIVLNKIDLVGSAVALEVWERLRSINEKADVLPCVRGAVDPAELVAATGFD 283
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Match: A0A7S0Q4E2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q4E2_9EUKA) HSP 1 Score: 271 bits (693), Expect = 2.070e-82 Identity = 144/231 (62.34%), Postives = 175/231 (75.76%), Query Frame = 1
Query: 1 KVPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLADGDGLSAAEQVVVLDNGCMCCTVRGDLLGAFASVLHKMEDSTSKGGGRALDSVLVETTGMADPVPIVRTLLQTPAIAGSFSLDGVVTLVDAKNLLSRLMDGEHELMTQEKQEEGPSDTV-DEAFQQIMFSDRIVINKVDLVSASTAVDVYQRVRSINESAGIVSCSRGKLDPAELEGLGAFD 690
K+P+T+LTGFLGAGKTT+LN+LLH QR+K+IAVIENEFGEVPID +LLA LSAAEQV+V+DNGCMCC+VRGD+LGAF S+ +E G LDSVL+ETTGMADPVPIVRTLLQTP I+ F L+GVVTLVD+KN+L RL + E GP+ DEAFQQIMF+DRIV+NK+DLV A+ V+ ++RSIN A I+ C RG+LDP +L GAFD
Sbjct: 138 KIPITVLTGFLGAGKTTLLNHLLHEQREKKIAVIENEFGEVPIDNELLASK--LSAAEQVIVMDNGCMCCSVRGDILGAFESIFAAVE------AGNPLDSVLIETTGMADPVPIVRTLLQTPDISERFKLNGVVTLVDSKNVLGRLDETEEVA--------GPNSAAPDEAFQQIMFADRIVLNKIDLVPTPVAISVWHKLRSINSRANIMPCVRGQLDPVDLVDFGAFD 352
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Match: A0A7S3XSH9_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XSH9_HETAK) HSP 1 Score: 263 bits (673), Expect = 5.090e-82 Identity = 141/230 (61.30%), Postives = 177/230 (76.96%), Query Frame = 1
Query: 1 KVPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLADGDGLSAAEQVVVLDNGCMCCTVRGDLLGAFASVLHKMEDSTSKGGGRALDSVLVETTGMADPVPIVRTLLQTPAIAGSFSLDGVVTLVDAKNLLSRLMDGEHELMTQEKQEEGPSDTVDEAFQQIMFSDRIVINKVDLVSASTAVDVYQRVRSINESAGIVSCSRGKLDPAELEGLGAFD 690
KVPVTILTGFLGAGKTT+LNYLL QRD+RIAVIENEFGEVPID +LLA+ L+AAEQVVV+DNGC+CCTVRGDLLGAF +V+ +M+ + R LD+V+VETTGMADPVPIVRT LQTPA+A F LDGVVTL DA N+ + L D E + TV+EA+QQ+ F++R++++KVDLV A+ V+V+ ++R+IN A I+ RG++DPAEL G GAFD
Sbjct: 118 KVPVTILTGFLGAGKTTVLNYLLQEQRDRRIAVIENEFGEVPIDNELLAEK--LTAAEQVVVMDNGCLCCTVRGDLLGAFTAVMEQMDPA------RPLDAVVVETTGMADPVPIVRTFLQTPAVAARFRLDGVVTLADAVNVGAHLDDDEAG--------DAAEGTVNEAWQQVAFANRLILSKVDLVPAAQVVEVFHQLRAINPGAKILPVVRGRVDPAELSGFGAFD 331
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Match: A0A0G4FCK2_9ALVE (CobW C-terminal domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4FCK2_9ALVE) HSP 1 Score: 255 bits (652), Expect = 3.620e-76 Identity = 137/228 (60.09%), Postives = 175/228 (76.75%), Query Frame = 1
Query: 1 KVPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLADGDGLSAAEQVVVLDNGCMCCTVRGDLLGAFASVLHKMEDSTSKGGGRALDSVLVETTGMADPVPIVRTLLQTPAIAGSFSLDGVVTLVDAKNLLSRLMDGEHELMTQEKQEEGPSDTVDEAFQQIMFSDRIVINKVDLVSASTAVDVYQRVRSINESAGIVSCSRGKLDPAELEGLGA 684
++PVTILTGFLG+GKTT LN+LLHVQRDKR+AVIENEFG VPID DLL LS+AEQVVV+DNGCMCCT+RGDLLGAF +V+ + ST G ALDSV++ETTGMADP+PIVRT +Q+ AI F L+GVVTLVD +N+ RL++G E + E G VDEAFQQI+F+D+I++NKVDLV+A+ A++V++ VR++N A + RG++ PA L G GA
Sbjct: 110 RIPVTILTGFLGSGKTTTLNHLLHVQRDKRVAVIENEFGAVPIDNDLLTTK--LSSAEQVVVMDNGCMCCTMRGDLLGAFEAVMQTAKGSTE--GELALDSVVIETTGMADPMPIVRTFMQSAAICEKFRLEGVVTLVDCRNIRHRLLEGMSERLA--SLEPG---AVDEAFQQILFADKIILNKVDLVTANEALEVWEGVRAVNADARTIPTHRGRIPPALLAGGGA 328
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Match: A0A7S3LQG0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LQG0_9STRA) HSP 1 Score: 245 bits (626), Expect = 8.910e-73 Identity = 127/230 (55.22%), Postives = 170/230 (73.91%), Query Frame = 1
Query: 1 KVPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLADGDG-LSAAEQVVVLDNGCMCCTVRGDLLGAFASVLHKMEDSTSKGGGRALDSVLVETTGMADPVPIVRTLLQTPAIAGSFSLDGVVTLVDAKNLLSRLMDGEHELMTQEKQEEGPSDTVDEAFQQIMFSDRIVINKVDLVSASTAVDVYQRVRSINESAGIVSCSRGKLDPAELEGLGAF 687
++P +LTGFLGAGKTT+LN++L VQ D++IAVIENEFGE+ ID DLL + ++AAEQ+VV+DNGCMCCTVRGDLL AF S+ ++++ G LDSV++ETTGMA+PVPI+RT+ TP I FS+ GV+TLVDAKN+L+RL + + +E + G S DEAFQQIMF+D+IVI+K+DLV VDV++R+R IN+ A ++ C RG+LDP EL F
Sbjct: 121 RIPTVVLTGFLGAGKTTLLNHILRVQEDRKIAVIENEFGEIAIDKDLLEENASKITAAEQLVVMDNGCMCCTVRGDLLAAFNSIAARVDE------GNHLDSVVIETTGMANPVPIIRTIHNTPLINSRFSVKGVITLVDAKNILNRLKE-----LGKEAGDLGNSVEEDEAFQQIMFADKIVISKIDLVPLQAIVDVWRRIREINQKAPMIGCVRGQLDPNELSEFATF 339
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Match: A0A7S2PUR3_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2PUR3_9DINO) HSP 1 Score: 234 bits (596), Expect = 3.310e-72 Identity = 128/229 (55.90%), Postives = 161/229 (70.31%), Query Frame = 1
Query: 4 VPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLADGDGLSAAEQVVVLDNGCMCCTVRGDLLGAFASVLHKMEDSTSKGGGRALDSVLVETTGMADPVPIVRTLLQTPAIAGSFSLDGVVTLVDAKNLLSRLMDGEHELMTQEKQEEGPSDTVDEAFQQIMFSDRIVINKVDLVSASTAVDVYQRVRSINESAGIVSCSRGKLDPAELEGLGAFD 690
VP+TI TGFLGAGKTT+LN+LL QRDK+IAVIENEFG VPID +LL + L AEQVVV++NGCMCCTVRGDLLGAF S+ +ME G LD+VLVETTGMADPVPIVRTL QTP IA F LDG +TLVD ++L+RL + + + E +QI F+D+I++NK+DLV+ V+ R+RS NE+A +V+ +G + PAEL LGA+D
Sbjct: 100 VPITIFTGFLGAGKTTVLNHLLKNQRDKKIAVIENEFGAVPIDNELLQNS-ALDLAEQVVVMENGCMCCTVRGDLLGAFDSIRRQMER------GSPLDAVLVETTGMADPVPIVRTLRQTPEIARHFRLDGTITLVDTNSILNRLSECDKDDQ--------------ERHRQIAFADKILLNKLDLVNQDQVAQVWGRIRSFNEAAPVVASVKGVVPPAELTNLGAYD 307
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Match: A0A813JR76_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813JR76_POLGL) HSP 1 Score: 228 bits (580), Expect = 2.050e-69 Identity = 126/229 (55.02%), Postives = 160/229 (69.87%), Query Frame = 1
Query: 4 VPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLADGDGLSAAEQVVVLDNGCMCCTVRGDLLGAFASVLHKMEDSTSKGGGRALDSVLVETTGMADPVPIVRTLLQTPAIAGSFSLDGVVTLVDAKNLLSRLMDGEHELMTQEKQEEGPSDTVDEAFQQIMFSDRIVINKVDLVSASTAVDVYQRVRSINESAGIVSCSRGKLDPAELEGLGAFD 690
VP+TI TGFLG+GKTT+LN+LL Q+DK+ AVIENEFGEVPID +LL + L AEQV+V++NGCMCCTVRGDLLGAF ++ +ME G LD+VLVETTGMADPVPIVRT+ QTP IA F LDG +TLVDA+ ++ RL E+ G D E QI F+D+I++NK+DLVS +V+ R+RS N SA IVS +G + +EL +GA+D
Sbjct: 110 VPITIFTGFLGSGKTTVLNHLLSGQKDKKFAVIENEFGEVPIDNELLHNS-ALGMAEQVIVMENGCMCCTVRGDLLGAFDAIRRQMET------GSPLDAVLVETTGMADPVPIVRTVRQTPDIAKYFQLDGTITLVDARTIIDRL----------EECAGGNDDQ--ERHSQIAFADKILLNKLDLVSDQEVAEVWSRIRSYNSSAPIVSSVKGVVPASELTNIGAYD 319
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Match: A0A836CDY8_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDY8_9STRA) HSP 1 Score: 235 bits (600), Expect = 1.570e-68 Identity = 144/281 (51.25%), Postives = 178/281 (63.35%), Query Frame = 1
Query: 4 VPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLAD-----------------------------GDGLSAAEQVVVLDNGCMCCTVRGDLLGAFASVLHKMEDSTSKGGGRALDSVLVETTGMADPVPIVRTLLQTPAIAGSFSLDGVVTLVDAKNLLSRL--------MDGEHELMTQEKQEE---GPSDTVDEAFQQIMFSDRIVINKVDLVSASTA----VD---------VYQRVRSINESAGIVSCSRGKLDPAELEGLGAF 687
+PVTILTGFLG+GKTT+LN+LLH QR++R+AVIENEFGEVPID +LL+ +S AE + ++NGCMCCTVRGDLLGAF +V KM+ + R LD+VL+ETTGMADPVPIVRT LQTPAIA SF LDGVVTLVD KN+ RL +G L K++ G VDEAFQQIMF+DRI++NKV LV A+ A VD V++ +R+IN A I+SC+RG+LDPA + G GAF
Sbjct: 44 IPVTILTGFLGSGKTTVLNHLLHEQRERRVAVIENEFGEVPIDNELLSAKMELAEAMVVMDLXXXXXXXXXXXXXXLLSAKMSLAEFTIPVENGCMCCTVRGDLLGAFMAVKAKMDPN------RPLDAVLIETTGMADPVPIVRTFLQTPAIAASFKLDGVVTLVDCKNVRPRLDAIEAAAKAEGGSGLTPPGKKKGAAGGAKGEVDEAFQQIMFADRIIMNKVGLVPAAAAAVATVDXXXXXXXXAVWRDLRAINAGAKILSCTRGRLDPAAITGFGAF 318 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6253.14010.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6253.14010.1 >prot_H-paniculata_contig6253.14010.1 ID=prot_H-paniculata_contig6253.14010.1|Name=mRNA_H-paniculata_contig6253.14010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=235bp KVPVTILTGFLGAGKTTMLNYLLHVQRDKRIAVIENEFGEVPIDGDLLADback to top mRNA from alignment at H-paniculata_contig6253:78..11232- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6253.14010.1 ID=mRNA_H-paniculata_contig6253.14010.1|Name=mRNA_H-paniculata_contig6253.14010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11155bp|location=Sequence derived from alignment at H-paniculata_contig6253:78..11232- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6253:78..11232- >mRNA_H-paniculata_contig6253.14010.1 ID=mRNA_H-paniculata_contig6253.14010.1|Name=mRNA_H-paniculata_contig6253.14010.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1410bp|location=Sequence derived from alignment at H-paniculata_contig6253:78..11232- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |