mRNA_H-paniculata_contig6251.14007.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Match: A0A836BPG6_9CHLO (EXPERA domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BPG6_9CHLO) HSP 1 Score: 120 bits (301), Expect = 1.200e-29 Identity = 66/153 (43.14%), Postives = 102/153 (66.67%), Query Frame = 1
Query: 70 FTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETNHDYLMVSPAAPWFGALVWMEIFFQVPFFAFATVAFVKKWNTVRIPCIIYGSSAATSVVPIIGDVLASDKLTDPQRYKLIGIYMPWIILPVILMLIMAADPTPF---GIGAR 519
F A+F H+ TLL+D+Q++ A+ P + ++++H++TN D+L VS WF ++VW E Q+PFF A AF+KK N +RIPCIIYGS AT++VPI+GD+L + + P ++ L IY+P++I+PV+L++ MAA P+ G G R
Sbjct: 12 FLAYFIIHIPTTLLVDSQSV-LPADWFPSWAREMLQWHIKTNGDHL-VSSNPVWFVSMVWCETVLQMPFFFVAAWAFIKKANWIRIPCIIYGSHVATTMVPILGDILFGPE-SGPNKHVLAAIYVPYLIVPVLLVIRMAAAEKPWASTGAGKR 161
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Match: A0A150GYU0_GONPE (EXPERA domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GYU0_GONPE) HSP 1 Score: 120 bits (300), Expect = 1.640e-29 Identity = 64/157 (40.76%), Postives = 100/157 (63.69%), Query Frame = 1
Query: 70 FTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETNHDYLMVSPAAPWFGALVWMEIFFQVPFFAFATVAFVKKWNTVRIPCIIYGSSAATSVVPIIGDVLASDKLTDPQRYKLIGIYMPWIILPVILMLIMAADPTPFGIGARPMASKKR 540
F AFF H+ TLL+D+Q++ F AE P + +K+H+E N D+L VS WF +LVW E+ +Q+PFF A+ AF+K+ N +R+P IIYG+ T+++PI+ D+L + P+R+ L IY+P++I+P++L++ MA PFG KR
Sbjct: 12 FLAFFIIHIPTTLLVDSQSV-FPAEYYPPWAKEALKWHIEMNGDHL-VSKNPTWFVSLVWGEVLYQLPFFFVASYAFIKRRNWIRVPSIIYGAHVVTTMIPILTDILFGPD-SGPKRHTLAAIYVPYLIVPLLLLVRMAVVEQPFGADDASKRGVKR 165
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Match: D8UHN3_VOLCA (EXPERA domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UHN3_VOLCA) HSP 1 Score: 119 bits (298), Expect = 3.230e-29 Identity = 67/165 (40.61%), Postives = 107/165 (64.85%), Query Frame = 1
Query: 43 MLSSYTRWGFTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETNHDYLMVSPAAPWFGALVWMEIFFQVPFFAFATVAFVKKWNTVRIPCIIYGSSAATSVVPIIGDVLASDKLTDPQRYKLIGIYMPWIILPVILMLIMAADPTPFGIGARPMASKK 537
+L+S F A+F H+ T+++D+Q++ A+ P + L+++H++TN D+L VS WF +LV EI Q+PFF A+ AF+K+ N +RIPCI+YGS AT++VPI+ + L S + P+R L+ IY+P++++PV+L++ MA PFG A SKK
Sbjct: 3 LLTSVLDRIFLAYFILHIPTTVIVDSQSVV-PAQYFPSWAKELLQWHIKTNGDHL-VSSNPLWFVSLVACEILLQLPFFFVASYAFLKRRNWIRIPCIVYGSHVATTMVPILSEFLFSPE-AGPKRLTLVSIYLPYLVVPVLLVVRMAVVERPFGSTAAGKRSKK 164
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Match: A0A0L0DGW0_THETB (Transmembrane protein 97 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DGW0_THETB) HSP 1 Score: 117 bits (294), Expect = 1.250e-28 Identity = 67/154 (43.51%), Postives = 92/154 (59.74%), Query Frame = 1
Query: 70 FTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETNHDYLMVSPAAPWFGALVWMEIFFQVPFFAFATVAFVKKWNTVRIPCIIYGSSAATSVVPIIGDVLASDK--------LTDPQRYKLIGIYMPWIILPVILMLIMAADPTPFG 507
F +FA H+ T L+DAQ +P VAE P F L+ YHVET HD L+ P WF +LV E Q+PFF A AFV K N +RIP IIYG+ AT++VPI+ ++ ++ LT R LI IY+P++++P+ L++ MA PFG
Sbjct: 8 FLVYFAVHIPTTALIDAQCLPVVAELVPGFAKELLAYHVETFHDPLVADPPR-WFVSLVVCEALLQLPFFFVAVYAFVAKRNWIRIPAIIYGAHVATTLVPILAEIAYAEPKADSPGGVLTPELRATLIAIYIPYLLVPITLVVRMACAEHPFG 160
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Match: A0A836BQS8_9CHLO (EXPERA domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BQS8_9CHLO) HSP 1 Score: 115 bits (289), Expect = 6.960e-28 Identity = 64/150 (42.67%), Postives = 99/150 (66.00%), Query Frame = 1
Query: 70 FTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETNHDYLMVSPAAPWFGALVWMEIFFQVPFFAFATVAFVKKWNTVRIPCIIYGSSAATSVVPIIGDVLASDKLTDPQRYKLIGIYMPWIILPVILMLIMAADPTPFG-IGA 516
F AFF H+ TLL+DAQ++ A+ P + ++++H++TN D+L+ + WF +L+ E+ FQ+PFF AT AF+ K N +RIPCIIYGS AT+VVPI+GD L + P +Y L I P++++P++L++ MA P+G +GA
Sbjct: 12 FLAFFVIHIPTTLLVDAQSV-LPADWFPLWAREMLQWHIKTNGDHLVATNPV-WFKSLICCELTFQLPFFFIATYAFITKANWIRIPCIIYGSHVATTVVPILGDFLFGPE-AGPNKYVLASINAPFLVIPLLLVIRMAMVEQPWGSVGA 158
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Match: A0A4D9D300_9STRA (EXPERA domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D300_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.210e-27 Identity = 60/156 (38.46%), Postives = 99/156 (63.46%), Query Frame = 1
Query: 46 LSSYTRWGFTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETNHDYLMVSPAAPWFGALVWMEIFFQVPFFAFATVAFVKKWNTVRIPCIIYGSSAATSVVPIIGDVLASDKLTDPQRYKLIGIYMPWIILPVILMLIMAADPTPFGIG 513
+ ++ RW F +F +H+ +TL +DAQ+I + P L++++ ET D+LM +P PWF A+V E+ Q+PFF A F + N +R+PCI+YGS AT++VPI+ + L+ ++ LIGIY P++++PV+L++IM + PFG+G
Sbjct: 8 MPAFFRWLFFWYFVTHIPITLFIDAQSISSMYH--PPAFTNLLRWYTETYGDFLMANPP-PWFQAVVACELVMQLPFFFVAAYGFWTQQNWLRLPCIVYGSHVATTLVPILDAFARAPHLSLDKKMTLIGIYSPYLLVPVMLVVIMWRNERPFGMG 160
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Match: A0A2K3E7Z2_CHLRE (EXPERA domain-containing protein n=4 Tax=Chlamydomonas TaxID=3052 RepID=A0A2K3E7Z2_CHLRE) HSP 1 Score: 112 bits (279), Expect = 1.970e-26 Identity = 62/146 (42.47%), Postives = 91/146 (62.33%), Query Frame = 1
Query: 70 FTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETNHDYLMVSPAAPWFGALVWMEIFFQVPFFAFATVAFVKKWNTVRIPCIIYGSSAATSVVPIIGDVLASDKLTDPQRYKLIGIYMPWIILPVILMLIMAADPTPFG 507
F A+F H+ TLL+D+Q++ F AE P + +++H++TN D+L VS WF +LVW E Q+PFF A AF+K+ N +R+PCIIYG+ AT++VPI+ D+L S L IY P++ LP+ L++ MA PFG
Sbjct: 11 FLAYFIIHIPTTLLVDSQSV-FPAEYFPSWAKEALQWHIKTNGDHL-VSTNPLWFVSLVWCETALQLPFFFVAAYAFIKRANWIRVPCIIYGAHVATTMVPILTDILFSPA-AGSHSPALAAIYAPYLALPLALVIRMAVSAQPFG 153
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Match: A0A8J4CRT1_9CHLO (EXPERA domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4CRT1_9CHLO) HSP 1 Score: 109 bits (273), Expect = 1.410e-25 Identity = 60/146 (41.10%), Postives = 96/146 (65.75%), Query Frame = 1
Query: 70 FTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETNHDYLMVSPAAPWFGALVWMEIFFQVPFFAFATVAFVKKWNTVRIPCIIYGSSAATSVVPIIGDVLASDKLTDPQRYKLIGIYMPWIILPVILMLIMAADPTPFG 507
F A+F H+ T+++D+Q++ A P + L+++H++TN D+L V WF +LV E F Q+PFF FAT AF+K+ N +R+P I+YG+ ATS+VPI+ D+L S + P+R L IY+P++I+P++L++ M PFG
Sbjct: 12 FLAYFILHIPTTIVVDSQSVV-PARFIPSWAKELIQWHIKTNGDHL-VGTNPLWFVSLVACECFIQLPFFFFATYAFIKRRNWIRMPSILYGTHVATSMVPILVDILLSPS-SGPKRVTLALIYLPYLIVPLLLVVRMVVTAQPFG 154
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Match: A0A5B8MZ24_9CHLO (DUF2781 domain-containing protein n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MZ24_9CHLO) HSP 1 Score: 108 bits (270), Expect = 7.290e-25 Identity = 62/148 (41.89%), Postives = 93/148 (62.84%), Query Frame = 1
Query: 70 FTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETNHDYLMVSPAAPWFGALVWMEIFFQVPFFAFATVAFVKKWNTVRIPCIIYGSSAATSVVPIIGDV-LASD-KLTDPQRYKLIGIYMPWIILPVILMLIMAADPTPFG 507
F FF +H+ TL +D Q I AE P+ L+++H++ D LM + A W +++W E+ QVPFF AT AFV N +R+P ++YG AT++VPI+G + L SD KL+D +R L GIY+P++++P++L L M A PFG
Sbjct: 36 FVIFFVTHVPTTLFVDCQCI-LPAEYFPKACHDLLQFHLDNFKDPLMGTCPA-WLRSIIWCELLLQVPFFLAATYAFVCSKNWIRLPALMYGIHTATTLVPILGSLWLNSDAKLSDVERLTLTGIYLPYLVMPLLLALKMLASKAPFG 181
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Match: A0A2J7ZRN6_9CHLO (Transmembrane protein 97 n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J7ZRN6_9CHLO) HSP 1 Score: 107 bits (266), Expect = 1.560e-24 Identity = 58/155 (37.42%), Postives = 95/155 (61.29%), Query Frame = 1
Query: 70 FTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETNHDYLMVSPAAPWFGALVWMEIFFQVPFFAFATVAFVKKWNTVRIPCIIYGSSAATSVVPIIGDVLASDKLTDPQRYKLIGIYMPWIILPVILMLIMAADPTPFGIGARPMASK 534
F A+F H+ T+++D+Q+I A+ P + L+++H++TN D+L VS WF +LV E Q+PFF F+++ N +R+PCIIYG+ AT++VPI+ D+L + P+R L IY P++++P++L+L MA PF A + K
Sbjct: 11 FLAYFIIHIPTTIIVDSQSIV-PAQYFPVWAKELLQWHIKTNEDHL-VSTNPVWFVSLVTCETLLQLPFFFVVAYGFIRRANWIRVPCIIYGTHVATTMVPILADILFGPD-SGPKRLTLFWIYFPYLLVPLLLVLRMALVDKPFAAAAGRRSGK 162 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6251.14007.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6251.14007.1 >prot_H-paniculata_contig6251.14007.1 ID=prot_H-paniculata_contig6251.14007.1|Name=mRNA_H-paniculata_contig6251.14007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=168bp MLSSYTRWGFTAFFASHLFLTLLLDAQAIPFVAENSPEFLIALMKYHVETback to top mRNA from alignment at H-paniculata_contig6251:796..3001+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6251.14007.1 ID=mRNA_H-paniculata_contig6251.14007.1|Name=mRNA_H-paniculata_contig6251.14007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2206bp|location=Sequence derived from alignment at H-paniculata_contig6251:796..3001+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6251:796..3001+ >mRNA_H-paniculata_contig6251.14007.1 ID=mRNA_H-paniculata_contig6251.14007.1|Name=mRNA_H-paniculata_contig6251.14007.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1008bp|location=Sequence derived from alignment at H-paniculata_contig6251:796..3001+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |