mRNA_H-paniculata_contig12201.1398.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig12201.1398.1
Unique NamemRNA_H-paniculata_contig12201.1398.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Match: A0A6H5L5H3_9PHAE (Kinesin-like protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L5H3_9PHAE)

HSP 1 Score: 534 bits (1375), Expect = 3.460e-180
Identity = 296/372 (79.57%), Postives = 323/372 (86.83%), Query Frame = 1
Query:    4 GSMNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFAYGATGAGKTHTMMGSERVVGTRVAEDGSEEVSGIVPQSLVELFRLIAERMEDQAGCGKEQEMGDGEEVWTVRVGYLQVYNEQIYDLLTPSSKPLRINEDPSKGVVVVAGLAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQQVAVTRKI---MVGQRTDSSRESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALAANRRRRGGKGASNVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHVYFDDSHNTLKYANRAKNIKVDPKMAEALRGGGAAGADRDQSRLAKDYEALKERNALVEAQLEALR 1110
            GS NEY+FDA FPP+AGQSEVY+GTA+P+ISELLEGINVTVFAYGATGAGKTHTMMGSERVVG R A D   EVSGIVPQSLVELFRL+A R E   G G+E E     E W+VRVGYLQVYNEQI DLL+ SSKPL+INEDP+KGVVVVAGLAEMEV SS+EVL+LLRQGNANRRTEATGANQVSSRSHAVLQ V VTR +   + G R  S RESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALA NRRRRGGKG  NVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHV+FDDSHNTLKYANRAKNIKVDPK  E++R       D++ +++AKDY+ALKERN L+EAQLE++R
Sbjct:    2 GSANEYSFDAVFPPDAGQSEVYEGTAKPHISELLEGINVTVFAYGATGAGKTHTMMGSERVVGVR-AGDEPTEVSGIVPQSLVELFRLLAARAE--VGSGEEDEA----ETWSVRVGYLQVYNEQIMDLLSDSSKPLKINEDPAKGVVVVAGLAEMEVTSSEEVLDLLRQGNANRRTEATGANQVSSRSHAVLQ-VVVTRTLENAVSGNR--SVRESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALAGNRRRRGGKGPGNVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHVFFDDSHNTLKYANRAKNIKVDPKTTESVREASRLLTDKE-AKMAKDYQALKERNQLMEAQLESMR 362          
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Match: A0A835YL84_9STRA (Kinesin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL84_9STRA)

HSP 1 Score: 356 bits (913), Expect = 2.490e-117
Identity = 212/343 (61.81%), Postives = 239/343 (69.68%), Query Frame = 1
Query:    1 QGSMNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFAYGATGAGKTHTMMGSERVVGT---------RVAEDGSEEVSGIVPQSLVELFRLIAERMEDQAGCGKEQEMGDGEEVWTVRVGYLQVYNEQIYDLLTPSSKPLRINEDPSKGVVVVAGLAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQQVAVTRKIMVGQRTDSSRESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALAANRRRRGG---------KGASNVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHVYFDDSHNTLKYANRAKNIKV 975
            Q  +NEY FD AF P+A QS+VY+ TA+PYI +LL GINVTVFAYGATGAGKTHTM  S    G+                   SGI+PQSLV++FR +  R   +AG G   E       W+VRV YL+VYNEQI DLL P    L++ ED ++GVV VAGLAE  V S DEVL LLR GNANR+TEATGAN VSSRSHAVLQ V+VTR        D  RESKLSLIDLAGSERASATNN G  LRQGA+INKSLLSLANCIN LA N  R  G         +  +NVKYRDSKLT LLK SLEGRCR+VMIAN+NPSH  +DDSHNTL YANRAK+IKV
Sbjct:   90 QAKVNEYAFDCAFGPDATQSQVYEATAKPYIEDLLSGINVTVFAYGATGAGKTHTMGSSGTTCGSGXXXXXXXXXXXXXXXXXASGIMPQSLVDVFRGVEARR--RAGSGARAE------TWSVRVSYLEVYNEQILDLLEPGGC-LQVCEDKARGVVKVAGLAERRVASCDEVLRLLRAGNANRKTEATGANAVSSRSHAVLQ-VSVTRAHHDDCGNDVVRESKLSLIDLAGSERASATNNTGALLRQGASINKSLLSLANCINTLAQNAARASGXXXXXXXAARAPANVKYRDSKLTRLLKTSLEGRCRVVMIANLNPSHHTYDDSHNTLHYANRAKDIKV 422          
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Match: A0A024UPZ7_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UPZ7_9STRA)

HSP 1 Score: 341 bits (875), Expect = 5.330e-110
Identity = 200/348 (57.47%), Postives = 239/348 (68.68%), Query Frame = 1
Query:    1 QGSMNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFAYGATGAGKTHTMMGSER------VVGTRVAEDGSEEVSGIVPQSLVELFRLIAERMEDQAGCGKEQEMGDGEEVWTVRVGYLQVYNEQIYDLLTPSSKPLRINEDPSKGVVVVAGLAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQ-QVAVTRKIMVGQRT--DSSRESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALAAN--RRRRGG---------KGASNVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHVYFDDSHNTLKYANRAKNIKVDPK 984
            +G  NEY +D AFP  A Q EVY  T R  I  +L+G N T+FAYGATGAGKTHTMMGSER       +     +D    V GI+P SL ++FRLI+   E++A     + +G     WTV V YL+VYNEQI DLL PS++PL + EDP KGVV VAGL  + V SS +VL LLR GN NRRTE+T ANQVSSRSHAVLQ  V  T   M+ Q    +++ E  LSLIDLAGSERAS T N G +L +GANINKSLL+LANCINAL+++   RRR           K A   KYRDSKLTHLLK+SLEG CRLVMIAN+NPSH  F+++HNTLKYANRAKNI++ PK
Sbjct:   63 RGFTNEYAYDMAFPDYATQDEVYSKTVRNIIPTILKGFNATIFAYGATGAGKTHTMMGSERDGSDDNQLDHHDDDDDVPHVDGIIPHSLTDIFRLISRAREEEAEAAVAEGLGFN---WTVVVTYLEVYNEQIRDLLHPSNRPLALREDPVKGVVHVAGLHHVVVESSTQVLQLLRMGNRNRRTESTAANQVSSRSHAVLQVTVKHTTTTMLRQNNPHEATTEGVLSLIDLAGSERASNTQNTGLRLTEGANINKSLLALANCINALSSSMKERRRSDSSVTLRMREKPAPRTKYRDSKLTHLLKSSLEGDCRLVMIANINPSHACFEETHNTLKYANRAKNIRIRPK 407          
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Match: A0A8K1CIS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIS1_PYTOL)

HSP 1 Score: 338 bits (867), Expect = 5.620e-107
Identity = 195/347 (56.20%), Postives = 237/347 (68.30%), Query Frame = 1
Query:    1 QGSMNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFAYGATGAGKTHTMMGSER--VVGTRVAEDGSEEVSGIVPQSLVELFRLIAERMEDQAGCGKEQEMGDGEEVWTVRVGYLQVYNEQIYDLLTPSSKPLRINEDPSKGVVVVAGLAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQ-QVAVTRKIMVGQRTDSSR--ESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALAANRRR-------------RGGKGASNVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHVYFDDSHNTLKYANRAKNIKVDPKM 987
            Q S  EY +D AF  ++ Q EVY  T +  +  +L+G N T+FAYGATGAGKTHTMMGSER  +      +D   +V GI+P +L ++FR+I  R E++      Q  G   E W V V YL+VYNEQI DLL PS++ L + EDP++G+V VAGL   EVNS  +V+ LLR GN NR+TE T AN+VSSRSHAV+Q  +  T   M+  R       E KLSLIDLAGSERAS+T NRG +L +GANINKSLL+LANCIN+L+A  RR             RG  G + V+YRDSKLTHLLK SLEG CRLVMIANVNPSH  FD+SHNTLKYANRAKNIK+ PKM
Sbjct:   69 QSSKKEYAYDFAFSEDSTQDEVYAKTVKDIVPTILDGYNATIFAYGATGAGKTHTMMGSERDGLGEFDDFDDDDYQVDGIIPHALTDIFRIIRCRQEEEEYLNIAQ--GSTFE-WKVLVSYLEVYNEQIRDLLQPSTRALSLREDPARGIVQVAGLHHEEVNSVGQVMQLLRFGNRNRKTEPTAANKVSSRSHAVIQVSIRHTTTTMLSDRNPRKAVVEGKLSLIDLAGSERASSTQNRGMRLTEGANINKSLLALANCINSLSAQNRRLGGSSYDSPEGAKRGNSGKAKVQYRDSKLTHLLKNSLEGECRLVMIANVNPSHACFDESHNTLKYANRAKNIKIRPKM 412          
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Match: A0A485LD64_9STRA (Kinesin-like protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD64_9STRA)

HSP 1 Score: 335 bits (858), Expect = 6.200e-107
Identity = 203/366 (55.46%), Postives = 244/366 (66.67%), Query Frame = 1
Query:    1 QGSMNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFA---------------YGATGAGKTHTMMGSER---VVGTRVAEDGSEEV---SGIVPQSLVELFRLIAERMEDQAGCGKEQEMGDGEEV-WTVRVGYLQVYNEQIYDLLTPSSKPLRINEDPSKGVVVVAGLAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQ-QVAVTRKIMVGQRT--DSSRESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALAAN----RRRRGG---------KGASNVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHVYFDDSHNTLKYANRAKNIKVDPK 984
            +G  NEY +D AFP  A Q EVY  T R  I  +L+G N T+FA               YGATGAGKTHTMMGSER       +V +D  +EV    GI+P SL ++FRLIAER  +Q    +   + DG    W V V YL+VYNEQI DLL PS++PL + EDP KGVV VAGL  +EV +S EVL LLR GN +RRTE+T ANQVSSRSHAVLQ  V  T   M+G+    +++ E  LSLIDLAGSERAS T+N G +L +GANINKSLL+LANCINAL++      RRR           K A   KYRDSKLTHLLK+SLEG CRL+MIAN+NPSH  F+++HNTLKYANRAKNI++ PK
Sbjct:   94 RGFSNEYAYDMAFPDCASQDEVYARTVRNIIPTILKGFNATIFACVMLFASWVLKRNRSYGATGAGKTHTMMGSERDGCTDNNQVMDDDDDEVPQVDGIIPHSLTDIFRLIAERRAEQ----QAMMLSDGTGFRWNVVVTYLEVYNEQIRDLLNPSNRPLALREDPVKGVVNVAGLHHVEVRNSAEVLQLLRSGNGHRRTESTAANQVSSRSHAVLQVSVKHTTTTMIGKNKPHEATTEGVLSLIDLAGSERASNTHNTGMRLTEGANINKSLLALANCINALSSTMKDKERRRSDSSVALRVREKPAPRTKYRDSKLTHLLKSSLEGDCRLIMIANINPSHACFEETHNTLKYANRAKNIRIRPK 455          
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Match: A0A1V9ZQM7_9STRA (Kinesin-like protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZQM7_9STRA)

HSP 1 Score: 331 bits (848), Expect = 8.230e-106
Identity = 196/350 (56.00%), Postives = 240/350 (68.57%), Query Frame = 1
Query:    1 QGSMNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFAYGATGAGKTHTMMGSERVVGTRVA------EDGSEEVSGIVPQSLVELFRLIAERMEDQAGCGKEQEMGDGEEVWTVRVGYLQVYNEQIYDLLTPSSKPLRINEDPSKGVVVVAGLAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQ-QVAVTRKIMVGQRTDSSR--ESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALAANRR---RRGGKGASNVK---------YRDSKLTHLLKASLEGRCRLVMIANVNPSHVYFDDSHNTLKYANRAKNIKVDPKM 987
            +GS NEY FD AFP EA Q EVYD T +  I  +L+G N T+FAYGATGAGKTHTMMG  R   +         EDG  + +GI+PQSL ++FRLI  R E++     + E   G   WTV V YL+VYNE I DLL P SK L + ED  KGVV V+GL  ++V S+ +VL+LLR GN NRRT AT AN+ SSRSHAVLQ  V  T   ++ + + ++   E KLS+IDLAGSERAS+T N G +L +GANINKSLL+LANCINAL++  +   RR    A  VK         YRDSKLTHLLK+SLEG CRL+MIAN++PSH  F++SHNTLKYANRAKNIK+ PKM
Sbjct:   55 RGSTNEYGFDIAFPVEATQDEVYDRTVKNVIPTILDGFNATIFAYGATGAGKTHTMMGKHRDSKSYDEFIDDEYEDGVPD-TGIIPQSLSDIFRLIHIRQEEEKA---QHENEGGSSSWTVTVSYLEVYNEAIRDLLNPKSKNLSLREDAQKGVVHVSGLRHVDVASATDVLDLLRTGNCNRRTGATSANKDSSRSHAVLQVTVKHTSTTLLSRHSPNAEISEGKLSMIDLAGSERASSTQNSGIRLTEGANINKSLLALANCINALSSTTQKVMRRRSDSALKVKEKRFIPRTKYRDSKLTHLLKSSLEGDCRLIMIANISPSHTSFEESHNTLKYANRAKNIKIRPKM 400          
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Match: W7TJK0_9STRA (Kinesin-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJK0_9STRA)

HSP 1 Score: 336 bits (861), Expect = 2.900e-104
Identity = 191/330 (57.88%), Postives = 236/330 (71.52%), Query Frame = 1
Query:    1 QGSMNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFAYGATGAGKTHTMMGSERVVGTRVAEDGSEEVSGIVPQSLVELFRLIAERMEDQAGCGKEQEMGDGEEVWTVRVGYLQVYNEQIYDLLTPSS---KPLRINEDPSKGVVVVAGLAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQQVAVTRKIMVGQRTDSSRESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALAANRRRRGGKGASNVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHVYFDDSHNTLKYANRAKNIKVDP 981
            QGS NEY FD AF  +A Q+EVY+ TA+ ++  +L+G NV++ AYGATGAGKT TMMGS     +  A   S  V+G++PQSL ++F  I ER +  A    +         W V   Y++VYNEQIYDL+ P +   +PL++ EDPSKGVVVVAGL EM V  + +VL+LLRQGN NR+TEAT ANQVSSRSHAVLQ + V    +     D  RES+LSLIDLAGSERASAT NRG +L++GANINKSLL+LANCINAL+ N    GG  A+NVKYRDSKLTHLLK SLEG+C++VM+ NVNP    FDDSHN +KY +RAK IK+ P
Sbjct:   70 QGSSNEYAFDVAFDADATQAEVYEQTAKMHVPSVLDGYNVSILAYGATGAGKTFTMMGS-----SCAAAGESAPVTGVIPQSLSDVFATI-ERRKRTAPPNSQ---------WQVFCSYMEVYNEQIYDLIGPGAGRGQPLQLREDPSKGVVVVAGLPEMLVRDTAQVLDLLRQGNRNRKTEATAANQVSSRSHAVLQ-ICVRFSTVDAAGHDLGRESRLSLIDLAGSERASATLNRGARLQEGANINKSLLALANCINALSENS---GGGKANNVKYRDSKLTHLLKTSLEGQCKVVMLVNVNPCDAVFDDSHNAIKYGHRAKQIKIRP 380          
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Match: A0A482SMD8_9ARCH (Kinesin motor domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMD8_9ARCH)

HSP 1 Score: 319 bits (817), Expect = 6.740e-103
Identity = 188/336 (55.95%), Postives = 233/336 (69.35%), Query Frame = 1
Query:    1 QGSMNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFAYGATGAGKTHTMMGSERVVGTRVAEDGSEEVSGIVPQSLVELFRLIAERMEDQAGCGKEQEMGDGEEVWTVRVGYLQVYNEQIYDLLTPSSKPLRINEDPSKGVVVVAGLAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQQVAVTRKIMVGQRTDSSRE----SKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALAANRRRRGGKGASNVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHVYFDDSHNTLKYANRAKNIKVDPKMAEA 996
            Q  +NEY FD  F  +  Q  VY+ TA+ +I  LL G NVTVFAYGATGAGKTHTM+G+     TR     +   +GI+P S+ +LF L+ +         K++++  GE  + V   +L+VYNEQ+YDLL  S K L + ED  KG+VV AGL EMEV   ++V  L+ QGN  R+TEAT ANQVSSRSHA+LQ     R I   QR D  RE    SKL+LIDLAGSERASATNNRG +L++GANINKSLL+LANCINALA N      + A NVKYRDSKLTHLL++SLEG   LVMIAN+NPS + ++DSHNTLKYANRAKNIK++P + E+
Sbjct:   55 QPIVNEYAFDEVFDDDVDQMSVYNRTAKSFIPHLLNGHNVTVFAYGATGAGKTHTMLGN-----TRADSAAANADAGIIPNSVKDLFSLLKQ---------KKRQLVYGES-YKVFASFLEVYNEQVYDLLESSGKILFVREDKDKGIVVAAGLTEMEVMEYEDVHELILQGNRQRKTEATMANQVSSRSHAILQ--LNVRHI---QRQDGGRECLQESKLALIDLAGSERASATNNRGARLQEGANINKSLLALANCINALAENA---NSRKAGNVKYRDSKLTHLLRSSLEGNGFLVMIANINPSDLTYEDSHNTLKYANRAKNIKINPLVKES 367          
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Match: K3WKQ5_GLOUD (Kinesin-like protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WKQ5_GLOUD)

HSP 1 Score: 326 bits (835), Expect = 3.490e-102
Identity = 195/352 (55.40%), Postives = 231/352 (65.62%), Query Frame = 1
Query:    1 QGSMNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFAYGATGAGKTHTMMGSER--VVGTRVAEDGSEEVSGIVPQSLVELFRLIAERMEDQAGCGKEQEMGDGEEVWTVRVGYLQVYNEQIYDLLTPSSKPLRINEDPSKGVVVVAGLAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQQVA--VTRKIMVGQRTDSSR-ESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALAA----------------NRR--RRGGKGASNVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHVYFDDSHNTLKYANRAKNIKVDPKM 987
            Q S  EY FD AFP  A Q EVY  T    +  +L G + T+FAYGATGAGKTHTMMGSER  +       D + EV GI+P +L ++F LI  R +++A     Q  G   E W V + YL+VYNEQI DLL PS  PL + ED ++G+V VAGL   E +S  EVL LLR+GN NR+TE T AN VSSRSHAV+Q +    T  ++ G     S  E KLSLIDLAGSERAS T NRG +L +GANINKSLL+LANCIN+L A                NRR   +  +  + V+YRDSKLTHLLK SLEG CRLVMIANVNPSH  FD+SHNTLKYANRAKNIK+ PKM
Sbjct:   65 QSSTKEYAFDIAFPETASQDEVYAKTVMDIVPTILNGYHATIFAYGATGAGKTHTMMGSERDGIGELEDFNDAAFEVDGIIPHALADIFSLIQHRKQEEAILKLSQ--GSAFE-WKVLISYLEVYNEQIRDLLQPSPTPLALREDQARGIVHVAGLHHEEAHSVGEVLQLLRRGNRNRKTEPTAANVVSSRSHAVIQVIIRHTTTTMLSGSNPRKSIVEGKLSLIDLAGSERASTTQNRGMRLTEGANINKSLLALANCINSLTAQTKMLVRSTSLESIDGNRRLLEQRSRLKTKVQYRDSKLTHLLKNSLEGDCRLVMIANVNPSHACFDESHNTLKYANRAKNIKIRPKM 413          
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Match: A0A067D128_SAPPC (Kinesin-like protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D128_SAPPC)

HSP 1 Score: 323 bits (828), Expect = 3.740e-102
Identity = 192/345 (55.65%), Postives = 234/345 (67.83%), Query Frame = 1
Query:    1 QGSMNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFAYGATGAGKTHTMMGSER-------VVGTRVAEDGSEE---VSGIVPQSLVELFRLIAERMEDQAGCGKEQEMGDGEEVWTVRVGYLQVYNEQIYDLLTPSSKPLRINEDPSKGVVVVAGLAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQQVAVTRKIMVGQRTDSSRE---SKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLANCINALA---ANRRRRGGKGASNVKYRDSKLTHLLKASLEGRCRLVMIANVNPSHVYFDDSHNTLKYANRAKNIKVDPKM 987
            +GS NEY +D AF  EA Q EVY+ T +  I  +L+G N T+FAYGATGAGKTHTMMGSER       +      +DG  E   V GI+PQSL ++FRLI  R +++      QE       W V V YL+VYNE I DL+ P    L++ E  + G V V+GLA  +V S+ EVLN+LRQGN NRRTE+T AN VSSRSHAVLQ     + + + +++  + E   +KLSLIDLAGSERA  T N G +L +GANINKSLL+LAN INAL+   A RRRR        KYRDSKLTHLLK+SLEG CRL+MIAN+NPSH  FD+SHNTLKYANRAKNIK+ PKM
Sbjct:   60 KGSSNEYAYDIAFSEEATQDEVYERTVKNIIPTILDGYNATIFAYGATGAGKTHTMMGSERDGHSLDELTENDFDDDGQPESLPVDGIIPQSLSDIFRLIRLREKEEKIV---QETEGRASEWMVTVSYLEVYNETICDLIDPKGVNLQLREHTTIGAVHVSGLAHRQVRSAVEVLNILRQGNKNRRTESTVANAVSSRSHAVLQVTVKHKTVDLMRKSSPNTEMTCAKLSLIDLAGSERACKTENSGARLTEGANINKSLLALANAINALSSTPAMRRRR-------AKYRDSKLTHLLKSSLEGDCRLIMIANINPSHKSFDESHNTLKYANRAKNIKIRPKM 394          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12201.1398.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L5H3_9PHAE3.460e-18079.57Kinesin-like protein n=2 Tax=Ectocarpus TaxID=2879... [more]
A0A835YL84_9STRA2.490e-11761.81Kinesin-like protein n=1 Tax=Tribonema minus TaxID... [more]
A0A024UPZ7_9STRA5.330e-11057.47Kinesin-like protein n=1 Tax=Aphanomyces invadans ... [more]
A0A8K1CIS1_PYTOL5.620e-10756.20Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485LD64_9STRA6.200e-10755.46Kinesin-like protein n=1 Tax=Aphanomyces stellatus... [more]
A0A1V9ZQM7_9STRA8.230e-10656.00Kinesin-like protein n=1 Tax=Thraustotheca clavata... [more]
W7TJK0_9STRA2.900e-10457.88Kinesin-like protein n=2 Tax=Monodopsidaceae TaxID... [more]
A0A482SMD8_9ARCH6.740e-10355.95Kinesin motor domain-containing protein n=1 Tax=ar... [more]
K3WKQ5_GLOUD3.490e-10255.40Kinesin-like protein n=1 Tax=Globisporangium ultim... [more]
A0A067D128_SAPPC3.740e-10255.65Kinesin-like protein n=2 Tax=Saprolegnia TaxID=476... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig12201contigH-paniculata_contig12201:340..7117 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score533.9
Seed ortholog evalue6e-149
Seed eggNOG ortholog2880.D7FYK8
KEGG koko:K10395,ko:K10396,ko:K10401
KEGG Pathwayko04144,ko04728,map04144,map04728
Hectar predicted targeting categoryother localisation
GOsGO:0000070,GO:0000226,GO:0000278,GO:0000280,GO:0000819,GO:0003674,GO:0003774,GO:0003777,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005856,GO:0005871,GO:0005875,GO:0006928,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007019,GO:0007049,GO:0007059,GO:0008150,GO:0009987,GO:0015630,GO:0016043,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0022402,GO:0022411,GO:0031109,GO:0031122,GO:0032984,GO:0032991,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043624,GO:0043933,GO:0044422,GO:0044424,GO:0044430,GO:0044446,GO:0044464,GO:0048285,GO:0051261,GO:0051276,GO:0071840,GO:0097435,GO:0098813,GO:0140014,GO:1903047
EggNOG free text desc.microtubule motor activity
EggNOG OGsCOG5059@1,KOG0242@2759
Ec32 ortholog descriptionKinesin motor domain
Ec32 orthologEc-02_004390.1
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147,ko04812
Exons8
Model size1113
Cds size1104
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928941.7861974-UTR-H-paniculata_contig12201:339..3481622928941.7861974-UTR-H-paniculata_contig12201:339..348Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12201 340..348 +
1691480674.7943263-UTR-H-paniculata_contig12201:339..3481691480674.7943263-UTR-H-paniculata_contig12201:339..348Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig12201 340..348 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928941.8042421-CDS-H-paniculata_contig12201:348..4841622928941.8042421-CDS-H-paniculata_contig12201:348..484Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 349..484 +
1691480674.8045077-CDS-H-paniculata_contig12201:348..4841691480674.8045077-CDS-H-paniculata_contig12201:348..484Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 349..484 +
1622928941.8186917-CDS-H-paniculata_contig12201:1368..15861622928941.8186917-CDS-H-paniculata_contig12201:1368..1586Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 1369..1586 +
1691480674.8129058-CDS-H-paniculata_contig12201:1368..15861691480674.8129058-CDS-H-paniculata_contig12201:1368..1586Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 1369..1586 +
1622928941.8374603-CDS-H-paniculata_contig12201:2500..26081622928941.8374603-CDS-H-paniculata_contig12201:2500..2608Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 2501..2608 +
1691480674.8219843-CDS-H-paniculata_contig12201:2500..26081691480674.8219843-CDS-H-paniculata_contig12201:2500..2608Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 2501..2608 +
1622928941.8517797-CDS-H-paniculata_contig12201:3119..32331622928941.8517797-CDS-H-paniculata_contig12201:3119..3233Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 3120..3233 +
1691480674.8380988-CDS-H-paniculata_contig12201:3119..32331691480674.8380988-CDS-H-paniculata_contig12201:3119..3233Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 3120..3233 +
1622928941.8657732-CDS-H-paniculata_contig12201:3805..38911622928941.8657732-CDS-H-paniculata_contig12201:3805..3891Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 3806..3891 +
1691480674.853933-CDS-H-paniculata_contig12201:3805..38911691480674.853933-CDS-H-paniculata_contig12201:3805..3891Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 3806..3891 +
1622928941.8811064-CDS-H-paniculata_contig12201:4367..45001622928941.8811064-CDS-H-paniculata_contig12201:4367..4500Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 4368..4500 +
1691480674.875632-CDS-H-paniculata_contig12201:4367..45001691480674.875632-CDS-H-paniculata_contig12201:4367..4500Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 4368..4500 +
1622928941.8961682-CDS-H-paniculata_contig12201:5120..52881622928941.8961682-CDS-H-paniculata_contig12201:5120..5288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 5121..5288 +
1691480674.8895097-CDS-H-paniculata_contig12201:5120..52881691480674.8895097-CDS-H-paniculata_contig12201:5120..5288Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 5121..5288 +
1622928941.9093974-CDS-H-paniculata_contig12201:6976..71171622928941.9093974-CDS-H-paniculata_contig12201:6976..7117Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 6977..7117 +
1691480674.9000428-CDS-H-paniculata_contig12201:6976..71171691480674.9000428-CDS-H-paniculata_contig12201:6976..7117Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig12201 6977..7117 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig12201.1398.1prot_H-paniculata_contig12201.1398.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig12201 349..7117 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig12201.1398.1

>prot_H-paniculata_contig12201.1398.1 ID=prot_H-paniculata_contig12201.1398.1|Name=mRNA_H-paniculata_contig12201.1398.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=368bp
MNEYTFDAAFPPEAGQSEVYDGTARPYISELLEGINVTVFAYGATGAGKT
HTMMGSERVVGTRVAEDGSEEVSGIVPQSLVELFRLIAERMEDQAGCGKE
QEMGDGEEVWTVRVGYLQVYNEQIYDLLTPSSKPLRINEDPSKGVVVVAG
LAEMEVNSSDEVLNLLRQGNANRRTEATGANQVSSRSHAVLQQVAVTRKI
MVGQRTDSSRESKLSLIDLAGSERASATNNRGEQLRQGANINKSLLSLAN
CINALAANRRRRGGKGASNVKYRDSKLTHLLKASLEGRCRLVMIANVNPS
HVYFDDSHNTLKYANRAKNIKVDPKMAEALRGGGAAGADRDQSRLAKDYE
ALKERNALVEAQLEALR*
back to top

mRNA from alignment at H-paniculata_contig12201:340..7117+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig12201.1398.1 ID=mRNA_H-paniculata_contig12201.1398.1|Name=mRNA_H-paniculata_contig12201.1398.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6778bp|location=Sequence derived from alignment at H-paniculata_contig12201:340..7117+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGGATCGATGAACGAGTACACGTTCGACGCTGCGTTCCCTCCGGAGGC TGGGCAGTCGGAAGTGTACGATGGCACAGCGAGGCCCTACATCTCGGAGC TCCTGGAAGGCATCAATGTCACCGTCTTCGCCTATGGGGCGACCGGTCAG TGCGCCTCTGTGTTGTACCCACATCACCTCACAACCTGTTTATTAGGGCA TACTTGCAACTATATCGATAATGGTCTCGTCCCGAGATATTCATTCGTTC AATCAGCCTGCTCCTGCAGGTATAATTCGTGGCGGTAAGCGGACTTACCT TGTGGCAGACAGGAAGACAATTTTGTGATTGTGCAAAACGTGACGATGAG AAAGGTTCAGGTACCGTACCCCCGCCTGTCAGTCTTCGGACGGCATGACA TACCTAAATATCAGCCTTCTCCAGTCTGCCCCCCTGGCATGCATGATACG TGCTTGATCTTGACTATGTGTCTCGAGTTATGCACGCAGAGAAAATATAT ATTTTTTATTTTATTTTATTGGTGGGCTTCTGTGAATGAAGGACCAATTT TTCTATCCAATGCCAGTCGTTAGGGTGTGAGCGTACTACGTCTACCGCCG ATGCACTCCGTGACACTCTCTGAAGTCTGCAGTATACACTCATTGGTCCG ATTCGACAGCACACAGAAATGTTTTGTGGGGTAGGTGGTGACACTGTGGC CATGTAAGTGATGATCATGCAGGATAAGCACACCTTCAGTAGGTAAATGT GAAGAGGGTGCCGATGTCTATCGAATTACTATACTGTACGCAGCTTAGAG GAAGAAGCTACACAACCCTCGTCTAACAGCAAGTACCATATAGACGTAAG AAATACGACGTTCCGTGTTTTGCACATGTCTGCTTTTCGACTTCTCCTCT GATTATTTTTGACCGCTGTTTGACCTCTGTCAATACGCGCACTCTTCTTA CCCCCTCCTCTCCTCTATTTCGTATTGACCACCCACGCATATTCTACCTC TTTTTTTTTTTATCTTAAACATGTGACAGGGGCAGGCAAAACGCACACAA TGATGGGTTCGGAGCGAGTCGTGGGCACCCGTGTTGCAGAGGACGGTTCC GAAGAAGTTTCCGGGATCGTTCCGCAGAGTCTCGTGGAGCTGTTCAGGCT GATCGCAGAGCGTATGGAAGATCAAGCTGGGTGCGGCAAGGAGCAGGAGA TGGGAGATGGAGAGGAAGTGTGGACTGTGCGGGTTGGATACCTACAGGTG TGTGCGAAGAGAGGGATGAAAAGGAGTCATCTAATTGGTCCAAAAGGTAC CGTTGACGAGTGAAGTCACTCACGGTTCTGACTTCACCCTCAGCTGTGTT TTTCTTTTTTTTCCCTATTACAAGATGAACATACGTTTGCTTCTTGGTTC ATCTAGTCGATCTGTCTCATTTTTTACGAACGAAAGAATGATCGTCTGGT ACCTTTTTTTTTCGCGTCTTTTTTGCAAGACCAGCAATCGGGTTTGGCGT CTGTTGTGTTCATCTCATTTGGTCATTATCTAGTCCAGCTTCAGGTTTGC GCTGTTTTTTTCCACAACTAGTTTGCTGGCGAAAAATCATTTTTTCGACT AAAAAAAATGTCTCGCCCAATCATAATCCTCGCTTGGGATGAAGGTATCC AATGCCGTTTTTCCCCTTGATACAAAAGCCAGAGCACTGAAATGGAGCAT ATATTCATTCAAGTATCGAAATCGTCAGTGAGTTCAGAGAGTAAGAACGA AAGGTGCAAGTCATCTTCCTACCCAGACTGCAGCTTGACATCGTTTGGAC TTGTCAGCCCGAACAGACATGTTATGGTGAATCACCTTGTTGAGCATACA CTGGAAGCTGAAAAGCCGAACGCGTTGGCCATGGGCTGCCATCTCGGGTG TTTCCCAGCGTCCCGGGTCTGAGAAATTACTCACCTGGTGAACTTTTGGT TCGCTTTGATTTGCTTTGCCTTTAGCCTTTGTGTATGATAGGTACTGGTA CTCTCTAGGTGTCGCAAGTACTCTCTAGGTGTTGTAAGTACTCTCTAGGT GCGTAGCTACTCTTTAGATATACAACAAAGTAGATTTATGACTTGCTCTT GCTCTTGCTCTTGCTTCGCTTCGCTTCGCTTTCCCTTCGCCCATTTTTTT TTTTGCTCAAGGTCTACAACGAGCAGATTTATGACCTGCTCACACCTTCG TCCAAACCTCTGAGAATCAACGAGGATCCTAGCAAGGGCGTTGTCGTGGT TGCTGGACTGGCCGAAATGGTGAGTAGGACAAAAAATTGAACCACGGGTA ATAAGCGATGAGCCAGCCAGTCACCACAGGATAGTATACTAATAATATCA ACGAGCTCACACATGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTCGTT TGTTTGTTTGTTTGTTTGTGTGTTCGTGTGTTTTGCCCAATTTGGGACGT CCGAACGTGTGCGGTGCTCACTGTTTGTACGTTTGGCGTTATCTCTTTTA TTTCATTCATTATATAATGAATGTCTTTTGAAGCGGTGCCTACTATTTTA TAACCGCGGAGTATGATCTACCTTGAACAAGAACGAATAACAGAGATGAT GGCATAAGTTTTATCGCGTCGTTGTTTGTGCGTCGCTATGTATCCTCCTA GAAGCCAACCCAGGTAAAAACTGAACACATGGTGTATCTCAACTGCAAGC TTGATGTTTCTGCGCCTGCAGTTTACGCATTAATGTATTAAGTAGCGTTC TGAAATGTGTTTTTTGCTCTGGTGTTCCAGGAGGTGAACTCGAGCGACGA AGTGTTGAACCTGCTGCGTCAGGGCAACGCCAATAGGAGGACCGAGGCGA CGGGTGCCAATCAGGTCTCATCCAGATCTCATGCCGTCTTGCAGGTGAAT ATTACATATGCTTACAATGGAAGAGGCTCAGATGGTCGTTTCGGAGGTTC AAAGCACGGGATATATATAGTTGTGGAGAATGGCTACTACCATATTAAAA GGGAAATTTCCCTCATGTGTCTGTAAAGTACCTCACCCTTATTTCACAGT ATATATGCCTTGTTGTCGTTGTCCCCCTGATCGTTTCGGAACATTTTTCA AGTCTGTGTTCAAGTAAATTATGACAAAGGAATCTTGGTGCGAGCATATC GTGAGCACTAGAGATCGTGGCGGAGCCATAGTTGGTCGGTGGGGGACACT GCACGGACTGTACAGGCGTAGTAGCCTTGACTCTAATTCTACTCTATGTA CATGCATATAAATATAAAGGTAAACAACACAAATACCACCACCATCCAGC TGAGGTTTGGTAGATAATCAGAATTACCAGCGTCACCTTCAAGTATCTCT TTTGCATTTATCATTCGATTCCATGATACCTAAGATACGTCTTTCCCACC ATCCACCTACCTGTTGCTCCCATGTTTTTTGCTTTATTTGTTTCTTCTTT CGGTCCTTGAACCAAGCAGGTGGCCGTCACACGCAAGATTATGGTGGGAC AACGCACCGATTCCTCCAGGGAGTCCAAGCTGTCTTTGATCGACCTCGCG GGGTGAGTTATTTATGTCAAGAGAAAGGTATTTTACAGGGGTGGCTGTGT ACGGGGTATTCAGAAATATAGTTGGATATCGGTTGTCGAAACCAACACGA ATATATGGGTAATGCATAGGTCGGTGCTAACCAAGTGAGCCAGGCTCTCC TAGCGCCGGGAGAGCGCTTCAGTGCAAGCTAAAACAGCTGCCACTCGCTT GTGAGGTGGCTTCGCTCGAGGCACCGCCAGAGTTGGATGATGACCGCAGT ATGTGTACATTCATCACTGGAGGATGACTATAGCTCACTCACAATACCCC CCAACTCGATGAAATCCACTGTACTGTGTAAATTTCGATGGATTTTGCCT TAATTAGCAAATATTTAGACCAAAGCTGTGATGTGATGCGTGTTCCCCTC GTTTTAGTTTTTATAATTTCGGCCCACTGTTTGCATGTACTATTTCTTGA CTATTCTTCTCGTGCGTTTGTGTTTCAGGTCGGAGCGTGCGTCGGCCACA AACAACCGCGGGGAACAGCTTCGCCAAGGGGCGAACATTAACAAGTCGCT GCTGTCGTTGGCCAACTGCATTAACGCCCTGGCGGCTAATCGTCGTCGTC GAGGAGGAAAGGTATAGGTCCTCCAGCCGTCCTGTTCACGCCCCCCACCT TTTTTTTTCAACCCCTAGTATAGGTCATCATTTGGCCCAGTCATGGTTCT CTGAAACGTTTATTTTATACCTGCTTTACGTATACCATTAACGCACTAGT AAACTGAGCTTCCCGCCATAAAGAATGTACCCAATTGATTGATGGAGTGA TTCATCCATCCATTCATTCATTCATTATCCTATACTATTAATGGTGGTAA GGAGTAAAGGTCAAGGTTGTAGTGATGAGAAATATATCTCCATTTTCTCT CCTACACCTCTCTCCACACCTGGTTGTATTTCTTTGTTTCTGCTGTGGTC TATTATCATGCATTGTCGTCGTTGTCGTTGTCGTTGTCGTTGTTGTTGTT GTTGTTGTTGCTGTTCTGGTGGTGTTGATGGAAGCGAGGGAGTCGCGCTG GATTATCTGTCATTTTCTTGGGCCCTTTTTGTTCGTTTGTTTTAGCATGA TTCTTATTGTGTCAGTCGGTAATTCGTCGCTTTGATTGATTTGTCGTTGC TTAATTTTACGTAATCTTTTTTTTTTTTCGTTTTTTGATCGATCGGTTGG TTGGTCCGTTGATCGATTGATATTAACCAAGGGCGCCTCGAACGTGAAGT ACCGCGATAGCAAGCTGACTCATCTGCTCAAGGCGTCGCTGGAGGGGCGA TGCAGGCTGGTGATGATCGCCAATGTAAACCCTTCACACGTCTACTTTGA CGATTCCCACAACACGCTCAAGTACGCCAACCGAGCCAAGAACATCAAGG TACTTTCTGTCTGTCTGTACCTACTAGTATACATTAATATATATATGTAT ATATATTGCCAAAATAACCTGTAGACGGTCGATAGGGCTGGAATGTCACC GAACCGACTGCGAACCGGTTGTGCAAATGAAAAATCTCATAGAACACTAC CGGGAACCGGTTCTGGCTCTTGTCACGCACAAAAGTCATGTGAAAAGCCT TGAACGAAGAGAAAGGAGATGAGGCTGCTACGGGAAGGTGCCAACGTGCG ACCCTAGAGATATGGTACATACGGTAATTTCATAACATTAAACACAGGAG TTTCAAGATGTAAAGTCCCAAAGATTTCCGACGGCGTTCACTGTTCTACT TTTCGCATATAAAATGAAGGTTGTTCAGGACCGAGCCCGGTACACGGTCG GTGTTCAAATCATACAACGAGTGCTTCGGTACACATGGCCGACTCGTTGT TCAAATTGTATAACCAGTGCCCCGGTACACATGTTCACACAACCGATAAT GCCACAGTCAGACGGAACCGACTGCGAACCAGTTATAGAAATAAAAAAAT GAGGCATAACCGACCGCCGACGGGCTTGAATCTGATAGAACCGACCGAGC ACCGGTTGTTCGAATAAAAAAAACTTAACATAACCGACCGCCGATCGGTT TGAATCACAGAACCAACCGCAAATCAGTTGTACAAATGAGGAATCTCACA GAAGGTTACGGAGAACTGGTTCTGGTACCGGTCACGCGCAAAAGTCATAT GTAACGCCGGCCATGTGAAACGTCTTGGAAACGATTCAACTATTGGCGTT ATCCGATCCTTTTCTTCAGTGTACCGTATTCATGAATCCAATCAACGGAA CAAGAGCGTGCGATGATGGCTTGAACACGCTAAAGCGATGGATATCGGGT TAACCTGTACATTCAGCTGAAGGGTTCATCATGACACTTGGCGTCGCTGG TAGGACCATGTCCTCCAGTTCCTTGACCGGGAAGGATTCACTATCGTCCT CGTGCTATACAAGCTCAGGTTCACAACGGTTTTGGCTGGGGTGTAGATCG TCACGGGGGGCAGCGCAGGAGGCGGTGCCGATAGCGGGACGTGGCCAGCG CCTCCCAGTTGCTGTGGGCGATCGCCTGTGAAACCGCCTGGTTGTGTCCA CGAGCGAATGTCTCCGGGGTTTCGAGTTTTCCACGAAAGGAGTGTTGTTG ACCGTTTGAATCTAGGGTGCGCCGGGTCGCCGCTGTATCGGCGGTTTATG CTGCGGCGCGTGTGTGGGTTTCGTCATCCACGAGTCGGTCGAGCAGCATG TCGGGGTGGGGCTGGACAGGGGCCCTTGTCGGCGAAGGTGCCGCGGACGG TAGCGCCGGGGTCGCCGCTAGAACCGTTGGCGGCTGGGCAGCTAAGGCTT GCTGGTCCGGGCCAAGGGTCGCCCACAATTCTGGGATGATGTCGTCTGGC AGAGGACGATATTGGATCCTTTGCGGATGAGGGAGTAGACTAAATGATCC TATCGGCGAGGTCGAGTGTCATAGTGAGCAATTGGCTAAAGGTATGGTTA ACCCAATATCAATCACTTATGGTGCTCTGCTTGAGTGTTCATTATGACAC ACCGAAGAAACACGCCGAAGAAATGTACAAAACATTCTTCCTCCAACCCC CCCCCAATTTCAACTTGGGAAAAAAAAAATCATTCAGGTTGACCCAAAAA TGGCGGAGGCGTTACGAGGAGGAGGGGCCGCGGGGGCGGACCGCGACCAG TCGCGGCTCGCCAAAGACTACGAGGCTCTAAAAGAGCGCAACGCGCTTGT GGAGGCTCAGCTGGAAGCCCTTAGGTAA
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig12201:340..7117+

>mRNA_H-paniculata_contig12201.1398.1 ID=mRNA_H-paniculata_contig12201.1398.1|Name=mRNA_H-paniculata_contig12201.1398.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2208bp|location=Sequence derived from alignment at H-paniculata_contig12201:340..7117+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAACGAGTACACGTTCGACGCTGCGTTCCCTCCGGAGGCTGGGCAGTC
GGAAGTGTACGATGGCACAGCGAGGCCCTACATCTCGGAGCTCCTGGAAG
GCATCAATGTCACCGTCTTCGCCTATGGGGCGACCGATGAACGAGTACAC
GTTCGACGCTGCGTTCCCTCCGGAGGCTGGGCAGTCGGAAGTGTACGATG
GCACAGCGAGGCCCTACATCTCGGAGCTCCTGGAAGGCATCAATGTCACC
GTCTTCGCCTATGGGGCGACCGGGGCAGGCAAAACGCACACAATGATGGG
TTCGGAGCGAGTCGTGGGCACCCGTGTTGCAGAGGACGGTTCCGAAGAAG
TTTCCGGGATCGTTCCGCAGAGTCTCGTGGAGCTGTTCAGGCTGATCGCA
GAGCGTATGGAAGATCAAGCTGGGTGCGGCAAGGAGCAGGAGATGGGAGA
TGGAGAGGAAGTGTGGACTGTGCGGGTTGGATACCTACAGGGGCAGGCAA
AACGCACACAATGATGGGTTCGGAGCGAGTCGTGGGCACCCGTGTTGCAG
AGGACGGTTCCGAAGAAGTTTCCGGGATCGTTCCGCAGAGTCTCGTGGAG
CTGTTCAGGCTGATCGCAGAGCGTATGGAAGATCAAGCTGGGTGCGGCAA
GGAGCAGGAGATGGGAGATGGAGAGGAAGTGTGGACTGTGCGGGTTGGAT
ACCTACAGGTCTACAACGAGCAGATTTATGACCTGCTCACACCTTCGTCC
AAACCTCTGAGAATCAACGAGGATCCTAGCAAGGGCGTTGTCGTGGTTGC
TGGACTGGCCGAAATGGTCTACAACGAGCAGATTTATGACCTGCTCACAC
CTTCGTCCAAACCTCTGAGAATCAACGAGGATCCTAGCAAGGGCGTTGTC
GTGGTTGCTGGACTGGCCGAAATGGAGGTGAACTCGAGCGACGAAGTGTT
GAACCTGCTGCGTCAGGGCAACGCCAATAGGAGGACCGAGGCGACGGGTG
CCAATCAGGTCTCATCCAGATCTCATGCCGTCTTGCAGGAGGTGAACTCG
AGCGACGAAGTGTTGAACCTGCTGCGTCAGGGCAACGCCAATAGGAGGAC
CGAGGCGACGGGTGCCAATCAGGTCTCATCCAGATCTCATGCCGTCTTGC
AGCAGGTGGCCGTCACACGCAAGATTATGGTGGGACAACGCACCGATTCC
TCCAGGGAGTCCAAGCTGTCTTTGATCGACCTCGCGGGCAGGTGGCCGTC
ACACGCAAGATTATGGTGGGACAACGCACCGATTCCTCCAGGGAGTCCAA
GCTGTCTTTGATCGACCTCGCGGGGTCGGAGCGTGCGTCGGCCACAAACA
ACCGCGGGGAACAGCTTCGCCAAGGGGCGAACATTAACAAGTCGCTGCTG
TCGTTGGCCAACTGCATTAACGCCCTGGCGGCTAATCGTCGTCGTCGAGG
AGGAAAGGTCGGAGCGTGCGTCGGCCACAAACAACCGCGGGGAACAGCTT
CGCCAAGGGGCGAACATTAACAAGTCGCTGCTGTCGTTGGCCAACTGCAT
TAACGCCCTGGCGGCTAATCGTCGTCGTCGAGGAGGAAAGGGCGCCTCGA
ACGTGAAGTACCGCGATAGCAAGCTGACTCATCTGCTCAAGGCGTCGCTG
GAGGGGCGATGCAGGCTGGTGATGATCGCCAATGTAAACCCTTCACACGT
CTACTTTGACGATTCCCACAACACGCTCAAGTACGCCAACCGAGCCAAGA
ACATCAAGGGCGCCTCGAACGTGAAGTACCGCGATAGCAAGCTGACTCAT
CTGCTCAAGGCGTCGCTGGAGGGGCGATGCAGGCTGGTGATGATCGCCAA
TGTAAACCCTTCACACGTCTACTTTGACGATTCCCACAACACGCTCAAGT
ACGCCAACCGAGCCAAGAACATCAAGGTTGACCCAAAAATGGCGGAGGCG
TTACGAGGAGGAGGGGCCGCGGGGGCGGACCGCGACCAGTCGCGGCTCGC
CAAAGACTACGAGGCTCTAAAAGAGCGCAACGCGCTTGTGGAGGCTCAGC
TGGAAGCCCTTAGGTAAGTTGACCCAAAAATGGCGGAGGCGTTACGAGGA
GGAGGGGCCGCGGGGGCGGACCGCGACCAGTCGCGGCTCGCCAAAGACTA
CGAGGCTCTAAAAGAGCGCAACGCGCTTGTGGAGGCTCAGCTGGAAGCCC
TTAGGTAA
back to top