prot_H-paniculata_contig6229.13979.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6229.13979.1
Unique Nameprot_H-paniculata_contig6229.13979.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length110
Homology
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BLAST of mRNA_H-paniculata_contig6229.13979.1 vs. uniprot
Match: D8LT85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT85_ECTSI)

HSP 1 Score: 82.4 bits (202), Expect = 4.640e-16
Identity = 44/85 (51.76%), Postives = 55/85 (64.71%), Query Frame = 0 
Query:    1 PTQTELEELIVSILKKVSMRIASDPLSAIQTVQIVPPSLVLVAWAKLGSIKHTREFFGE----LDRIRPGMPVVVVGGHGDGEGL 81
            P Q +L +  V  +  V +RI +D  S IQTVQI+PPSLVLVAWA   S K  R+F G+    L  I+PG+PV VVGG  DGEG+
Sbjct:  636 PVQKQLADQFVRDIPNVEVRIVADVASTIQTVQIMPPSLVLVAWAAFSSAKFARDFLGDGARGLRGIKPGLPVAVVGGENDGEGM 720
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6229.13979.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LT85_ECTSI4.640e-1651.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6229contigH-paniculata_contig6229:10735..11901 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6229.13979.1mRNA_H-paniculata_contig6229.13979.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6229 10735..11901 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6229.13979.1 ID=prot_H-paniculata_contig6229.13979.1|Name=mRNA_H-paniculata_contig6229.13979.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=110bp
PTQTELEELIVSILKKVSMRIASDPLSAIQTVQIVPPSLVLVAWAKLGSI
KHTREFFGELDRIRPGMPVVVVGGHGDGEGLRIELETMGAGVVLLWPYKL
EDIKVCVIS*
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