prot_H-paniculata_contig6226.13975.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6226.13975.1
Unique Nameprot_H-paniculata_contig6226.13975.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length151
Homology
BLAST of mRNA_H-paniculata_contig6226.13975.1 vs. uniprot
Match: A0A6H5JF13_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF13_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 7.150e-27
Identity = 71/144 (49.31%), Postives = 90/144 (62.50%), Query Frame = 0
Query:    3 VGDREPAAVTVTESADGSVVVATVSVRCSPSDIQQEEERVYRVFVAPGPSFIADARTNXXXXXXXXXXXXXXNKKSNVELPFVGTSFSYIVTSSGSEPPFPSITANDVGTVDVVGSGGSGTGRTYVIVLNAVDTIHILEVALRT 146
            +GD EPA+V VTES+DG +VVA VS      ++Q++E+RVY VFVAPGPS++A                      ++ E PFVG +FSYIV  SG  P  PSI A+DVG VD  G+ G+G  R YVIVLNAVD I ++EV L T
Sbjct:   96 IGDEEPASVAVTESSDGFLVVAVVS----RVEMQEDEDRVYHVFVAPGPSYLAAVN-------------------ASAETPFVGAAFSYIVPGSGGAP-VPSIAAHDVGGVD--GAAGAGEERVYVIVLNAVDAIRVVEVRLHT 213          
BLAST of mRNA_H-paniculata_contig6226.13975.1 vs. uniprot
Match: D8LIF3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIF3_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 1.220e-26
Identity = 70/144 (48.61%), Postives = 90/144 (62.50%), Query Frame = 0
Query:    3 VGDREPAAVTVTESADGSVVVATVSVRCSPSDIQQEEERVYRVFVAPGPSFIADARTNXXXXXXXXXXXXXXNKKSNVELPFVGTSFSYIVTSSGSEPPFPSITANDVGTVDVVGSGGSGTGRTYVIVLNAVDTIHILEVALRT 146
            +GD EPA+V VTES+DG +VVA VS      ++Q++E+RVY VFVAPGPS++A                      ++ E PFVG +FSYIV  SG  P  PSI A+DVG VD  G+ G+G  R Y+IVLNAVD I ++EV L T
Sbjct:  164 IGDEEPASVAVTESSDGFLVVAVVS----RVEMQEDEDRVYHVFVAPGPSYLAAVN-------------------ASAETPFVGAAFSYIVPGSGGAP-VPSIAAHDVGCVD--GAAGAGEERVYMIVLNAVDAIRVVEVRLHT 281          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6226.13975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JF13_9PHAE7.150e-2749.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIF3_ECTSI1.220e-2648.61Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6226contigH-paniculata_contig6226:1929..4545 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6226.13975.1mRNA_H-paniculata_contig6226.13975.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6226 1929..4566 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6226.13975.1 ID=prot_H-paniculata_contig6226.13975.1|Name=mRNA_H-paniculata_contig6226.13975.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=151bp
MEVGDREPAAVTVTESADGSVVVATVSVRCSPSDIQQEEERVYRVFVAPG
PSFIADARTNNNDNNNNTMEDDNSNKKSNVELPFVGTSFSYIVTSSGSEP
PFPSITANDVGTVDVVGSGGSGTGRTYVIVLNAVDTIHILEVALRTGREC
S
back to top