prot_H-paniculata_contig62196.13964.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig62196.13964.1
Unique Nameprot_H-paniculata_contig62196.13964.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length282
Homology
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Match: A0A6A2WSU7_HIBSY (Integrase catalytic domain-containing protein n=2 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WSU7_HIBSY)

HSP 1 Score: 219 bits (559), Expect = 2.200e-61
Identity = 115/255 (45.10%), Postives = 157/255 (61.57%), Query Frame = 0
Query:   29 VCSACEKETAWKQPIKPYREERTTKPLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPWALKQFERDVARAKGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAYTPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTRPHNGGTSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSLGYDEDSPSCRIYNPENKSVQLSRNVRFEEEDF 282
            +C AC K    +Q  K  R  R  + LE+VHTDIAGP D  S GG R+ + F+DD+SR   +Y L++KSEA   LK+F+    +  G  +K LRSD+GG YT K F  FC E+ I  + +A YTPQQ+GVAER  R+I  MAR+ +    + R +WAEA+R AVY LNR PT+     T  E W G+ P + H ++FGC AY       R+KLDD+    + +GYDE S + R+YNP  K + +SR+V F+E D+
Sbjct:  364 LCEACIKGKQHRQSFKVGRSGRAQRLLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLKEFKAMAEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTARYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHFKIFGCIAYAHVPEHTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 618          
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Match: UPI001F004464 (DDE-type integrase/transposase/recombinase n=1 Tax=Corynebacterium parakroppenstedtii TaxID=2828363 RepID=UPI001F004464)

HSP 1 Score: 216 bits (549), Expect = 2.600e-60
Identity = 116/287 (40.42%), Postives = 172/287 (59.93%), Query Frame = 0
Query:    1 LLHERLGHVRH--LPTVARQQGGR----LSGKLGVCSACEKETAWKQPIKPYREERTTKPLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPWALKQFERDVARAKGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAYTPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTRPHNGGTSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSLGYDEDSPSCRIYNPENKSVQLSRNVRFEEE 280
            L H R GH+    L  ++++   R    +S    +C  C     +++        R  KPLEL+HTDI GP+   S G   + ++F+DD+SR   VY L+QKSEA    K+F+  V +  GL IK +RSD+GG +T + F+NFC ++ I++  +   +PQQ+GVAER  R+I  MAR+ + + N+ + +WAEA+  AVY LNR+PTR   G T  E W G  P + HLRVFG  AY     + R KLDDK+ A + +GYD +S   ++YNP+  ++ +SR+V F+EE
Sbjct:  115 LWHLRFGHLNFGGLELLSKKDMVRGLPFISHPNQLCEGCLLGKQFRKSFPKKSSSRAQKPLELIHTDICGPIKPSSLGKSNYFLLFIDDFSRKTWVYFLKQKSEAFEVFKKFKAAVEKESGLHIKAMRSDRGGEFTSREFQNFCEKHGIRRPLTVPRSPQQNGVAERKNRTILDMARSMLKSKNLPKEFWAEAVACAVYLLNRSPTRSVWGKTPQESWSGRKPGISHLRVFGSKAYAHVPDETRSKLDDKSKAFIFIGYDSNSKGYKLYNPDTNNLVISRDVEFDEE 401          
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA)

HSP 1 Score: 216 bits (550), Expect = 3.730e-60
Identity = 113/287 (39.37%), Postives = 166/287 (57.84%), Query Frame = 0
Query:    1 LLHERLGHVRHLPTVARQQGGRLSGKL-------GVCSACEKETAWKQPIKPYREERTTKPLELVHTDIAGPVDK-SFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPWALKQFERDVARAKGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAYTPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTRPHNGGTSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSLGYDEDSPSCRIYNPENKSVQLSRNVRFEE 279
            L H+RLGH  +  T+ R     L   L        +C  C+     K P       R T+ L+LVHTD+ GP+   S  G ++ ++F+DDY+RM  V+ L++KS+      +F+  V    GL++KRLRSD G  YT   F+ FC +  I+ + +  YTPQQ+GV+ER  R++ +MAR  +    + + +WAEA+ ++VY LN  PT+   G T +E WHG TP ++HL+VFGC  Y +    +R KLD K+  G+ LGY   S   RIYNP  K + +SRNV+F+E
Sbjct:  395 LWHKRLGHFSY-STLKRMSSNDLVKNLPAIQDNANLCDVCQYGKQRKLPFPKEASWRATEKLQLVHTDVCGPMSTTSLNGSKYFLLFIDDYTRMSWVFFLKKKSDVFANFLKFKFMVENETGLQVKRLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDE 680          
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Match: A0A2G2VUS6_CAPBA (Integrase catalytic domain-containing protein n=1 Tax=Capsicum baccatum TaxID=33114 RepID=A0A2G2VUS6_CAPBA)

HSP 1 Score: 216 bits (549), Expect = 5.400e-60
Identity = 112/255 (43.92%), Postives = 157/255 (61.57%), Query Frame = 0
Query:   29 VCSACEKETAWKQPIKPYREERTTKPLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPWALKQFERDVARAKGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAYTPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTRPHNGGTSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSLGYDEDSPSCRIYNPENKSVQLSRNVRFEEEDF 282
            +C AC K    +Q  +  +  R  KPLE+VH+D+AGP D  S GG R+ + F+DD+SR   VY L++KSE     K+F+  V +  G  +K LRSD+GG YT   F +F  E+ I  + +  YTPQQ+GVAER  R+I  +AR+ +   ++ R +WAEA+R AVY LNR PT+     T  E W G+ P + HL++FGC AY     Q R+KLDD+    + +GYDE S + R YNP  K V +SR+V F+E D+
Sbjct:  817 LCEACIKGKQHRQSFEVGKSRRARKPLEIVHSDLAGPFDIPSLGGNRYYLTFIDDFSRRSWVYILKEKSETLDKFKEFKAMVEKQSGYYVKILRSDRGGEYTANLFEDFVKEHGIIHQLTVRYTPQQNGVAERKNRTILDLARSMVKGKHLPRNFWAEAVRCAVYLLNRCPTKSVRYMTPNEAWSGQKPGVGHLKIFGCIAYSHVPEQLRKKLDDRGEKCIFIGYDERSKAYRFYNPLTKKVIISRDVEFDEADY 1071          
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Match: A0A6A2WXP0_HIBSY (Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2WXP0_HIBSY)

HSP 1 Score: 214 bits (546), Expect = 1.420e-59
Identity = 111/244 (45.49%), Postives = 154/244 (63.11%), Query Frame = 0
Query:   40 KQPIKPYREERTTKPLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPWALKQFERDVARAKGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAYTPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTRPHNGGTSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSLGYDEDSPSCRIYNPENKSVQLSRNVRFEEEDF 282
            +Q  +  R  R  +PLE+VHTDIAGP D  S GG R+ + F+DD+SR   +Y L++KSEA   L++F+    +  G  +K LRSD+GG YT K F  FC E+ I  + +  YTPQQ+GVAER  R+I  MAR+ +    + R +WAEA+R AVY LNR PT+     T  E W G+ P + HL++FGC AY     Q R+KLDD+    + +GYDE S + R+YNP  K + +SR+V F+E D+
Sbjct: 1296 RQSFEVGRSWRARRPLEIVHTDIAGPFDIPSLGGNRYYLTFIDDFSRKCWIYILKEKSEALEKLREFKAMSEKQSGQYLKILRSDRGGEYTSKLFEEFCKEHGIIHQLTGRYTPQQNGVAERKNRTILDMARSMIKGKQLPRNFWAEAVRCAVYLLNRCPTKSVKYMTPNEAWSGQKPGVGHLKIFGCIAYAHVPEQTRKKLDDRGEKCIFIGYDERSKAYRLYNPLTKKIIISRDVEFDEADY 1539          
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Match: A0A6D2IM54_9BRAS (Uncharacterized protein n=2 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2IM54_9BRAS)

HSP 1 Score: 214 bits (545), Expect = 1.820e-59
Identity = 119/288 (41.32%), Postives = 174/288 (60.42%), Query Frame = 0
Query:    1 LLHERLGHVRHL---PTVARQQGGRL-----SGKLGVCSACEKETAWKQPIKPYREERTTKPLELVHTDIAGPV-DKSFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPWALKQFERDVARAKGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAYTPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTRPHNGGTSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSLGYDEDSPSCRIYNPENKSVQLSRNVRFEE 279
            L H+RLGH+ H      V ++    L     +G  G+C  C +    ++ I      R ++ L+LVHTDI GP+   S  G R+ I F+DDYSR    + L +KSEA  A K+F+    R  GL +  LRSD+GG Y    F+++C EN IK++ +AAYTPQQ+G+AER  RSI  MAR  M   ++ RR+W EA++ AV+ LNR+P+      T  E+W    P ++H+RVFGC AY +   ++R KLD+K+   V +G  ++S + R+YNPE K + +SR+VRF+E
Sbjct:  437 LWHKRLGHLSHSGMQSLVEKKMVNGLPQLSHNGDGGLCDICMRGKQNRENIPKKSSWRASRALQLVHTDICGPIAPTSASGKRYIINFIDDYSRKCWSFLLAEKSEALRAFKEFKVAAEREMGLSLVSLRSDRGGEYNSAAFQDYCRENGIKRQLTAAYTPQQNGIAERKNRSIMNMARCMMLGMSVPRRFWPEAVQYAVHVLNRSPSAALGDVTPDERWSNHKPSVEHVRVFGCVAYALVPYERRVKLDEKSIQCVFVGVSKESKAYRLYNPETKKIIISRDVRFDE 724          
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Match: W7TGQ6_9STRA (Retrotransposon unclassified n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TGQ6_9STRA)

HSP 1 Score: 201 bits (510), Expect = 3.000e-59
Identity = 121/299 (40.47%), Postives = 170/299 (56.86%), Query Frame = 0
Query:    1 LLHERLGHVRHLPTVARQQGGRLSG--------KLGVCSACEKETAWKQPIKPYREERTTKPLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPWALKQFERDVARA----KGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAYTPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTRPHNGG-TSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSLGYDE--DSPSC-RIYNPENKSVQLSRNVRFEEEDF 282
            L H+R GH+ +      +Q G + G        K GVC  CE+    K+       ER  +PLELVHTD+ GPV+ +S GG R+AI F DDY+R R VY ++ KSE+   LK++ +D+  +    K   ++ LRSD GG YTG  F+NFC  + I+Q+F   Y PQ +G+AE+SW  +  MARA    A +G+ +WAEA+ +A Y  NR+       G T Y K  G+   + HLR FGC A+    S +R K DD+A  G+ +GYD+  ++P C RIY P       S +V F+EE F
Sbjct:   23 LWHQRFGHMNY---EYLRQMGEIDGTGVPKGIKKPGVCGTCERAKQTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLRSDNGGEYTGIDFKNFCKNHGIRQDFGMPYGPQDNGLAEKSWHILCNMARALRIQAGLGKGFWAEALNTAAYIWNRSRNSALGPGETPYYKMFGKHASVKHLRTFGCKAFVHDTSVRRGKFDDRAVEGILIGYDDIGNNPKCYRIYIPSLGRYIRSGHVTFDEETF 318          
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Match: W7TIQ5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIQ5_9STRA)

HSP 1 Score: 207 bits (526), Expect = 6.300e-59
Identity = 123/299 (41.14%), Postives = 172/299 (57.53%), Query Frame = 0
Query:    1 LLHERLGHVRHLPTVARQQGGRLSG--------KLGVCSACEKETAWKQPIKPYREERTTKPLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPWALKQFERDVARA----KGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAYTPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTRPHNGG-TSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSLGYDE--DSPSC-RIYNPENKSVQLSRNVRFEEEDF 282
            L H+R GH+ +      +Q G + G        K GVC  CE+    K+       ER  +PLELVHTD+ GPV+ +S GG R+AI F DDY+R R VY ++ KSE+   LK++ +D+  +    K   ++ LRSD GG YTG  F+NFC  + I+Q+F   Y PQ +GVAE+SW  +  MAR+    A +G+R+WAEA+ +A Y LNR+ T     G T Y K  G+   + H R FGC A+    S +R K DD+A  G+ +GYD+  ++P C RIY P       S +V F+EE F
Sbjct:   23 LWHQRFGHMNY---EYLRQMGEIDGTGVPKGIKKPGVCGTCERAKQTKRSFGTKSRERAKEPLELVHTDVLGPVEVESLGGARYAIGFTDDYTRWRVVYPMKHKSESLDCLKRYIQDMNISFRDHKVNTLRGLRSDNGGEYTGIDFKNFCKNHGIRQDFGIPYGPQDNGVAEKSWHVLSNMARSLRIQAGLGKRFWAEALNTAAYILNRSRTSALGPGETPYYKMFGKHTSVKHFRTFGCKAFVHDTSVRRGKFDDRAVEGIMIGYDDIGNNPKCYRIYIPSIGKYIKSGHVTFDEETF 318          
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Match: UPI000A29CC5E (uncharacterized protein LOC110224828 n=1 Tax=Arabidopsis lyrata subsp. lyrata TaxID=81972 RepID=UPI000A29CC5E)

HSP 1 Score: 211 bits (536), Expect = 1.350e-58
Identity = 113/288 (39.24%), Postives = 171/288 (59.38%), Query Frame = 0
Query:    1 LLHERLGHVRH--LPTVARQQGGR----LSGKLGVCSACEKETAWKQPIKPYREERTTKPLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPWALKQFERDVARAKGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAYTPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTRPHNGGTSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSLGYDEDSPSCRIYNPENKSVQLSRNVRFEEED 281
            L H R GH+    L  +++++  R    ++    VC  C     +K         R  KPLEL+HTD+ GP+  KS G   + ++F+DD+SR   VY L++KSE     K+F+  V +  GL IK +RSD+GG +T K F  +C +N I+++ +   +PQQ+GVAER  R+I +MAR+ + +  + +  WAEA+  AVY LNR+PT+  +G T  E W G  P + HLRVFG  A+     ++R KLDDK+   + +GYD +S   ++YNP+ K   +SRNV F+EE+
Sbjct:  466 LWHLRFGHLNFGGLKLLSKKEMVRGLPCINHPNQVCEGCLLGKQFKMSFPKESSTRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFENFKRFKAHVEKESGLTIKSMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVAYAVYLLNRSPTKSISGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNVVFDEEE 753          
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Match: Q9M197_ARATH (Copia-type reverse transcriptase-like protein n=6 Tax=Arabidopsis thaliana TaxID=3702 RepID=Q9M197_ARATH)

HSP 1 Score: 211 bits (538), Expect = 1.540e-58
Identity = 113/287 (39.37%), Postives = 169/287 (58.89%), Query Frame = 0
Query:    1 LLHERLGHVRH--LPTVARQQGGR----LSGKLGVCSACEKETAWKQPIKPYREERTTKPLELVHTDIAGPVD-KSFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPWALKQFERDVARAKGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAYTPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTRPHNGGTSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSLGYDEDSPSCRIYNPENKSVQLSRNVRFEEE 280
            L H R GH+    L  ++R++  R    ++    VC  C     +K         R  KPLEL+HTD+ GP+  KS G   + ++F+DD+SR   VY L++KSE     K+F+  V +  GL IK +RSD GG +T K F  +C +N I+++ +   +PQQ+GVAER  R+I +MAR+ + +  + +  WAEA+  AVY LNR+PT+  +G T  E W G  P + HLRVFG  A+     ++R KLDDK+   + +GYD +S   ++YNP+ K   +SRN+ F+EE
Sbjct:  467 LWHLRFGHLNFGGLELLSRKEMVRGLPCINHPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEE 753          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig62196.13964.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A2WSU7_HIBSY2.200e-6145.10Integrase catalytic domain-containing protein n=2 ... [more]
UPI001F0044642.600e-6040.42DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A151T355_CAJCA3.730e-6039.37Retrovirus-related Pol polyprotein from transposon... [more]
A0A2G2VUS6_CAPBA5.400e-6043.92Integrase catalytic domain-containing protein n=1 ... [more]
A0A6A2WXP0_HIBSY1.420e-5945.49Phospholipase D n=1 Tax=Hibiscus syriacus TaxID=10... [more]
A0A6D2IM54_9BRAS1.820e-5941.32Uncharacterized protein n=2 Tax=Microthlaspi errat... [more]
W7TGQ6_9STRA3.000e-5940.47Retrotransposon unclassified n=1 Tax=Nannochlorops... [more]
W7TIQ5_9STRA6.300e-5941.14Gag-pol polyprotein n=1 Tax=Nannochloropsis gadita... [more]
UPI000A29CC5E1.350e-5839.24uncharacterized protein LOC110224828 n=1 Tax=Arabi... [more]
Q9M197_ARATH1.540e-5839.37Copia-type reverse transcriptase-like protein n=6 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001584Integrase, catalytic corePFAMPF00665rvecoord: 52..165
e-value: 2.8E-21
score: 75.9
IPR001584Integrase, catalytic corePROSITEPS50994INTEGRASEcoord: 50..215
score: 20.219
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 44..242
e-value: 3.3E-33
score: 116.5
NoneNo IPR availablePANTHERPTHR11439:SF265coord: 74..281
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 74..281
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 49..209

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig62196contigH-paniculata_contig62196:2..847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig62196.13964.1mRNA_H-paniculata_contig62196.13964.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig62196 2..847 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig62196.13964.1 ID=prot_H-paniculata_contig62196.13964.1|Name=mRNA_H-paniculata_contig62196.13964.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=282bp
LLHERLGHVRHLPTVARQQGGRLSGKLGVCSACEKETAWKQPIKPYREER
TTKPLELVHTDIAGPVDKSFGGCRFAIIFVDDYSRMRKVYTLRQKSEAPW
ALKQFERDVARAKGLRIKRLRSDQGGGYTGKPFRNFCAENSIKQEFSAAY
TPQQSGVAERSWRSIFKMARASMTAANMGRRYWAEAMRSAVYCLNRAPTR
PHNGGTSYEKWHGETPKLDHLRVFGCTAYKMFQSQQRRKLDDKAWAGVSL
GYDEDSPSCRIYNPENKSVQLSRNVRFEEEDF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001584Integrase_cat-core
IPR036397RNaseH_sf
IPR039537Retrotran_Ty1/copia-like
IPR012337RNaseH-like_sf