mRNA_H-paniculata_contig6211.13953.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Match: D8LLW8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLW8_ECTSI) HSP 1 Score: 424 bits (1091), Expect = 1.570e-137 Identity = 216/274 (78.83%), Postives = 242/274 (88.32%), Query Frame = 2
Query: 182 MGFFDQGNTQLEVAWFSVLALLSFFCFPFGIRLSRRFPQIVAAKLVPVLCLLLAYENIVLALSHVLPDDSALVRIGRTTRAAVIPMFLVVMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVVLFVLGILVNYDAIVGNDDKAGGTGLVDTQDASAHLLLALLPTTCMAVIALYIALYMWKYGNDASIVVQSTVCNGWIFLFLGSLALLAGQVPPESIFRVANESGQVLLLLSLIAIGREIGKEIQAADDFSSFLEKENEL 1003
MGFFDQ NT LE WF+VLA +S CFPFGI + RRF I+AAKLVPV+CLLLAYEN+VLALS+VL DDS V+IGRTTRAAVIP+FLVV FEVAYAVHKRRSV+FCGIVFDQGHRR VEPCSW LRNFV IV+V+LFV+ ILVNYD +G+D+KAGGTGLV+TQDAS HLLLALLPTT M +ALYIA+YMWKYGN ASIVVQSTVCNGW+FLFLG+LALL GQVPPE FRV NE+GQVL LLS+IAIGREIG+E+QAAD+FS FLEKENEL
Sbjct: 1 MGFFDQANTTLETVWFAVLAAVSLLCFPFGIWMGRRF-TILAAKLVPVVCLLLAYENLVLALSNVLSDDSKFVQIGRTTRAAVIPLFLVVTFEVAYAVHKRRSVQFCGIVFDQGHRRGVEPCSWVLRNFVGIVSVLLFVVHILVNYDIGIGDDNKAGGTGLVETQDASLHLLLALLPTTGMTALALYIAVYMWKYGNHASIVVQSTVCNGWMFLFLGTLALLGGQVPPEWCFRVVNETGQVLFLLSVIAIGREIGREVQAADNFSHFLEKENEL 273
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Match: A0A835YJZ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJZ6_9STRA) HSP 1 Score: 255 bits (652), Expect = 1.890e-73 Identity = 132/279 (47.31%), Postives = 183/279 (65.59%), Query Frame = 2
Query: 170 GWRSMGFFDQGNTQLEVAWFSVLALLSFFCFPFGIRLSRRFPQIVAAKLVPVLCLLLAYENIVLALSHVLPDDSALVRIGRTTRAAVIPMFLVVMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVVLFVLGILVNYDAIVGNDDKAGGTG-LVDTQDASAHLLLALLPTTCMAVIALYIALYMWKYGNDASIVVQSTVCNGWIFLFLGSLALLAGQVPPESIFRVANESGQVLLLLSLIAIGREIGKEIQAADDFSSFLEKENEL 1003
GW FF N++ E A F A+++ C RR P + A L+P+LC+L+ Y NI+LAL + +++ + A V+P+FLV +FE+AY VHK RSVKFCGIVFDQGHR + EPCSWFLR+ VR+ A+ LF+LGILV + +I G+DD A GTG AS +L L+P T MA ++LY++++MW+YGN+ASIVV ST CN W+ L LGSL +LAGQ+PP FR +N GQ +LL +++ + E+ +E A D F+ FL +EN L
Sbjct: 2 GWH---FFGLDNSEAETAIFISCAVVNGICLVPAAVFWRRTPGMTATWLMPLLCILMCYVNIILALGDSVNNNNPACLLANVVYALVVPLFLVALFEMAYTVHKTRSVKFCGIVFDQGHRINTEPCSWFLRHAVRMCALGLFILGILVYFHSI-GSDDAAAGTGGYTQFGGASVQFILCLVPATAMAAVSLYLSIFMWRYGNNASIVVHSTACNRWMLLLLGSLCMLAGQIPPAPAFRASNALGQTILLATMLVVYHEVEREAAARDHFAEFLAEENRL 276
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Match: A0A7S3Y231_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y231_HETAK) HSP 1 Score: 185 bits (469), Expect = 7.620e-49 Identity = 108/286 (37.76%), Postives = 163/286 (56.99%), Query Frame = 2
Query: 182 MGFFDQGNTQLEVAWFSVLALLSFFCFPFGIRLSRRFPQIVAAK----------LVPVLCLLLAYENIVLALSHVLPDDSALVRIGRTTRAAVIPMFLVVMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVVLFVLGILVNYDAIVGNDDKAGGTGLVDTQDASA-HLLLALLPTTCMAVIALYIALYMWKYGNDASIVVQSTVCNGWIFLFLGSLALLAGQVPPESIFRVANESGQVLLLLSLIAIGREIGKEIQAADDFSSFLEKENELA 1006
M FF + + LE+ +F + GI L P I+ AK L P+ C+++A EN +LAL L DS+ V + V+P+FLV+ F++AY VHK RSV F I FD+GHR+ VEP SW +RN +R+VA L + LVNY+ ++G AG +G +D A + L+LLP T +A L IA +W YG ++V+ +TV N WI LFLG++ LAG V P ++ V + +G++ LL+ +I I I K+ Q ++ F+ FL+ +++A
Sbjct: 1 MTFFGEEESNLELTFFGIFT---------GISLILLIPAIIFAKRNVRFGYFVWLTPIQCVIMAIENFMLALGENLDSDSSGVTFYLALHSLVVPLFLVISFDIAYMVHKNRSVNFFCISFDEGHRKRVEPHSWVMRNLMRMVAACLVAVNALVNYN-VLGAAADAGRSGYLDWSAADPLEVTLSLLPGTVLAAFNLGIAFRLWLYGTQRALVIHATVWNEWILLFLGAMGQLAGLVAPTELYSVTSNAGEIFLLMCIIFIQYTIKKDFQLSNQFNLFLDAYDKVA 276
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Match: A0A6U6D2G5_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6D2G5_9STRA) HSP 1 Score: 159 bits (403), Expect = 3.320e-39 Identity = 102/281 (36.30%), Postives = 163/281 (58.01%), Query Frame = 2
Query: 227 FSVLALLSFFC----FPFGIRLSRRFPQIVAAKLVPVLCLLLAYENIVLALSHVLPDDSA----LVRIGRTTRAAVIPMFLVVMFEVAYAVHKRRSVKFCGIVFDQGHRR----SVEPCSWFLRNFVRIVAVVLFVLGILVNYDAIVGN----DDKAGGTG----LVDTQ--DASAHLLLALLPTTCMAVIALYIALYMWKYGNDASIVVQSTVCNGWIFLFLGSLALLAGQVPPESIFRVANESGQVLLLLSLIAIGREIGKEIQAADDFSSFLEKENEL 1003
+S+L L++F C F G S + A L P++CL+++ EN LA D+ LV+ +A +P+ LVV FE+ Y VHK+R V FCG+ FD+G R + S+ LRN +RI+AV+LF +GI+ N+D ++G+ D+ AG G + D + D HLLL+LLPT +A+ + Y + +W+YG ++S+VV S++ N W F G+LAL GQV E F + + G ++ +++L+ + E+ K++ AAD+FS FL + E+
Sbjct: 18 YSILCLVAFLCSIRAFHLGKTRSHYGNFVSARYLFPLVCLIMSIENAALAAQGSFFTDTVEENKLVQAVYALQALEVPILLVVSFELTYLVHKKRGVNFCGMYFDEGRRVQKIITTPVKSFLLRNLIRILAVILFAMGIVGNFD-LLGDVSTVDELAGRAGWWSLVKDPRPWDQKWHLLLSLLPTAVLALCSFYFSFLLWRYGTESSMVVHSSILNPWFNPFFGTLALAVGQVFSEKWFPLTSNIGLLIFVITLLLLMVEVDKDMVAADNFSVFLTEAAEM 297
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Match: A0A7R9U8D5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U8D5_9STRA) HSP 1 Score: 154 bits (388), Expect = 1.780e-37 Identity = 85/275 (30.91%), Postives = 152/275 (55.27%), Query Frame = 2
Query: 179 SMGFFDQGNTQLEVAWFSVLALLSFFCFPFGIRLSRRFPQIVAAKLVPVLCLLLAYENIVLALSHVLPDDSALVRIGRTTRAAVIPMFLVVMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVVLFVLGILVNYDAIVGNDDKAGGTGLVDTQDA-SAHLLLALLPTTCMAVIALYIALYMWKYGNDASIVVQSTVCNGWIFLFLGSLALLAGQVPPESIFRVANESGQVLLLLSLIAIGREIGKEIQAADDFSSFLEKENE 1000
+M F + N E A +SV L+ + + F A L + ++ +EN VL + ++ AL A +IP+ LV +FE+AY VHK RSVKFCGI FD+GHR+S S+ +R + +A + + ILVN+D + +D+ AG TG + +AH++ A+LP+ +A+ YI++ +W YG++ S+ V ++ N W +F+G +A +AGQ+ + + V + G+ +LL ++ + I ++++ + F+ +L ++ E
Sbjct: 35 AMTFLGESNENYEYACYSVFILVLSLDLAVAVSYASVFRT---ACLGAITAAIMIFENAVLLAGDRVDEEGALAGATGIVHAFIIPLLLVYVFELAYQVHKHRSVKFCGITFDEGHRKSFGLKSFLVRRSTQFIATAIVAMNILVNFDLLSVDDEDAGSTGYAGLERGENAHIIFAILPSIILALYVAYISVALWLYGSNNSMTVYTSFVNPWGIVFVGGIAQVAGQIFNDEHYPVTSNGGETVLLSTIAFLIPHIVRDLEDVESFAKYLAEQEE 306
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Match: A0A7S1YZR4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YZR4_TRICV) HSP 1 Score: 153 bits (386), Expect = 5.830e-37 Identity = 102/293 (34.81%), Postives = 166/293 (56.66%), Query Frame = 2
Query: 182 MGFFDQGNTQLEVAW---FSVLALLSFFCFPFGIRLSR---RFPQIVAAK-LVPVLCLLLAYENIVLALSHVL----PDDSALVRIGRTTRAAVIPMFLVVMFEVAYAVHKRRSVKFCGIVFDQGHRRS---VEPC-SWFLRNFVRIVAVVLFVLGILVNYDAIVGN----DDKAGGTG----LVDTQDAS--AHLLLALLPTTCMAVIALYIALYMWKYGNDASIVVQSTVCNGWIFLFLGSLALLAGQVPPESIFRVANESGQVLLLLSLIAIGREIGKEIQAADDFSSFL 985
M F + G + V + +SVL ++ C + R + + +A+ L P++CL +A EN LA S + +D+ V+ +A +P+ L+V FE+ Y VHKRRSV FCG+ FD+G R S P S+ LRNF+R++AV L +GI+ N+D ++G+ D AG G + D + S HLLL+LLP+ + + Y + +W+YG ++S+VV S++ N + F G+LAL GQ+ PE F + + G ++ ++L+ + E+ K++ AADDF+ FL
Sbjct: 1 MTFIESGVSPPTVGFIISYSVLCAVALLCSVRACYIGRTRSHYRTLASARFLFPLVCLFIAIENAALAASGLFYEDKVEDNRFVQAIFALQATQVPLLLIVTFELTYLVHKRRSVNFCGMYFDEGRRVSKIITTPMKSFVLRNFIRMLAVFLLAMGIMGNFD-LLGDVTQVDSLAGRAGWWALVQDPRGWSKKGHLLLSLLPSAVLVLCCFYFSFLLWRYGTESSMVVHSSILNPYFSPFFGTLALATGQLFPERWFPLTSNVGLLVFCITLLLLMSEVDKDMVAADDFAGFL 292
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Match: A0A8K1CT76_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CT76_PYTOL) HSP 1 Score: 151 bits (381), Expect = 2.320e-36 Identity = 83/258 (32.17%), Postives = 150/258 (58.14%), Query Frame = 2
Query: 221 AWFSVLALLSFFCFPFGIRLSRRFPQIVAAKLVPVLCLLLAYENIVLALSHVLPDDSALVRIGRTTRAAVIPMFLVVMFEVAYAVHKRRSVKFCGIVFDQGHRRSV--EPCSWFLRNFVRIVAVVLFVLGILVNYDAIVGNDDKAGGTGLVDTQDASAHLLLALLPTTCMAVIALYIALYMWKYGNDASIVVQSTVCNGWIFLFLGSLALLAGQVPPESIFRVANESGQVLLLLSLIAIGREIGKEIQAADDFSSFLE 988
A+F + A ++ F F + +R++ + A L P +C L ++N V+A S L DS+ VR + VIPM L+V +EVAY VHK++SV FCGI F+ GHRR + S R FV ++A+ L V+ +L +Y N+ + D++ H + +++P + +++LYI L +W YG S +V +T N WI++ +GS+ALL G + PE ++ + + +G+++++ +++ + RE+ ++Q +F++
Sbjct: 16 AFFWIFAAVALVLFYFAMGYARKYRTVAAFVLPPFICFCLIFDNAVMATSG-LNRDSSTVRAMLAFHSCVIPMILLVCYEVAYLVHKQKSVNFCGISFESGHRRMLGRNALSTCQRFFVWLIAIALLVIDLLASYHW--QNEPAEIKSVYALEGDSTTHAVFSVVPALVLVLLSLYIGLQLWNYGTFYSYMVHATCFNPWIWMLVGSIALLTGYLMPEPLYALTSNAGELIMVATIVRMFREVHHDMQQGQQMRNFID 270
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Match: A0A7S2KLA8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KLA8_9STRA) HSP 1 Score: 146 bits (369), Expect = 8.080e-36 Identity = 94/259 (36.29%), Postives = 139/259 (53.67%), Query Frame = 2
Query: 182 MGFFD---QGNTQLEVAWFSVLALLSFFCFPFGIRLSRRFPQ----IVAAKLVPVLCLLLAYENIVLALSHVLPDDS----ALVRIGRTTRAAVI------PMFLVVMFEVAYAVHKRRSVKFCGIVFDQGHR-RSVEPCSWFLRNFVRIVAVVLFVLGILVNYDAIVGN---DDKAGGTGL------VDTQDASAHLLLALLPTTCMAVIALYIALYMWKYGNDASIVVQSTVCNGWIFLFLGSLALLAGQVPPESIF 877
M F D Q T +A + +L L+S C + I+L R L P+ L+LA EN LA S L + ++V + RA + P+ L+VMFEV Y +HKRRSV FCG+ FD+G R + + S LRN +R +A VL V+G++VN+D I N D+ AG G T HLLL+LLP + ++ Y++ MW+YG +S++V S++CN W + F G+LA+ AGQ+ E ++
Sbjct: 1 MTFIDPTQQPPTPGLIAGYVILTLVSLACTIWAIQLGRHRTHYRLFFSVRVLFPIAILILALENATLAASGKLMAQTIEGISVVEVHPLVRAIFVLQTFEVPILLIVMFEVTYLIHKRRSVNFCGMYFDEGRRLNNTQAMSCMLRNSIRSLATVLLVMGLMVNFDFITSNVPIDELAGRAGWWTLFEEEGTFQQELHLLLSLLPIAVLVAVSFYLSTMMWRYGTSSSMIVHSSICNPWFYCFFGTLAMAAGQLFAEQLY 259
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Match: A0A7S4RTW4_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RTW4_9STRA) HSP 1 Score: 148 bits (374), Expect = 4.230e-35 Identity = 95/290 (32.76%), Postives = 157/290 (54.14%), Query Frame = 2
Query: 206 TQLEVAWFSVLALLSFFCFPFGIRLSR---RFPQIVAAK-LVPVLCLLLAYENIVLALSHVLP-----DDSALVRIGRTTRAAVIPMFLVVMFEVAYAVHKRRSVKFCGIVFDQGHR--RSVEPC---SWFLRNFVRIVAVVLFVLGILVNYDA---IVGNDDKAGGTG---LVDTQD----------ASAHLLLALLPTTCMAVIALYIALYMWKYGNDASIVVQSTVCNGWIFLFLGSLALLAGQVPPESIFRVANESGQVLLLLSLIAIGREIGKEIQAADDFSSFL 985
T + + +L + FCF +RL + + A + L+P+ C +LA E LA S + DD+ ++I +A +P+ L FE Y VHKRRSV FCG+ FD+G R R + S+ LRNF+R +AV+L V+G++VN+D +V D AG G L + ++ + HL L+LLPT + + + Y + +W+YG ++S+VV S+ N W LF G++ L G+ E + +++ +G VL ++S + + E+ K+++AA +F FL
Sbjct: 12 TTGMITGYIILVIAFLFCFLKAVRLGQTRSHYRSFFAIRFLLPLCCFILAVETATLAASGIYSENKSLDDNVWIQIVYVIQAFEVPILLQSTFETCYLVHKRRSVNFCGMYFDEGRRVNRGIATTPMKSFILRNFIRAIAVLLLVMGLVVNFDLLRNVVEVDRLAGRAGWWPLFERKNNAEGQQLDFSENTHLFLSLLPTAILILCSFYFSALLWRYGTESSMVVHSSCWNPWFSLFFGTIFLFIGECFSEKWYPISSNTGFVLFIISYLHLMTEVDKDMKAASEFVEFL 301
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Match: W7TX25_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TX25_9STRA) HSP 1 Score: 145 bits (367), Expect = 1.040e-34 Identity = 91/259 (35.14%), Postives = 146/259 (56.37%), Query Frame = 2
Query: 239 ALLSFFC-FP---FGIRLSRRFPQIVAAKLVPVLCLLLAYENIVLALSHVLPDDSALVRIGRTTRAAVIPMFLVVMFEVAYAVHKRRSVKFCGIVFDQGHRRSVEPCSWFLRNFVRIVAVVLFVLGILVNYDAIVGN-DDKAGGTGLVDTQDAS-AHLLLALLPTTCMAVIALYIALYMWKYGNDASIVVQSTVCNGWIFLFLGSLALLAGQVPPES-IFRVANESGQVLLLLSLIAIGREIGKEIQAADDFSSFLEKE 994
A ++F C FP FG ++ R + P LC LAYEN++L + + + R G A + P+FLV FE YAVHK RSVK+ GI FD+G R PCSWFLRN VR++A+ LF +G++VN+ + D AG +G + AH ++++P+ +++ L IA + +YG +++++ + GW +L LGSL AGQ P + ++ + +GQV+LL+SL+ R + ++ A + FL ++
Sbjct: 19 ASVAFVCLFPAVYFGYQIQHRL-----IFMTPTLCFALAYENLLLVVPNTPFCTLSAQRFGWIMNAVIPPLFLVASFETGYAVHKHRSVKYLGINFDEGKRVDTAPCSWFLRNLVRLIALALFFMGLIVNFSVFFPDASDNAGMSGYLGLGRGDVAHYYVSIVPSLVFSLVTLVIAATIKRYGRHSTLLIPRSC--GWNWLLLGSLLQTAGQFPASTALYPSTSMAGQVVLLISLLLTHRLVLLDMGEAAKITEFLRRQ 270 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6211.13953.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6211.13953.1 >prot_H-paniculata_contig6211.13953.1 ID=prot_H-paniculata_contig6211.13953.1|Name=mRNA_H-paniculata_contig6211.13953.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=508bp MGFFDQGNTQLEVAWFSVLALLSFFCFPFGIRLSRRFPQIVAAKLVPVLCback to top mRNA from alignment at H-paniculata_contig6211:5136..12029+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6211.13953.1 ID=mRNA_H-paniculata_contig6211.13953.1|Name=mRNA_H-paniculata_contig6211.13953.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6894bp|location=Sequence derived from alignment at H-paniculata_contig6211:5136..12029+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6211:5136..12029+ >mRNA_H-paniculata_contig6211.13953.1 ID=mRNA_H-paniculata_contig6211.13953.1|Name=mRNA_H-paniculata_contig6211.13953.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3048bp|location=Sequence derived from alignment at H-paniculata_contig6211:5136..12029+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |