mRNA_H-paniculata_contig6210.13950.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Match: D7FN44_ECTSI (Outer row dynein assembly protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN44_ECTSI) HSP 1 Score: 175 bits (443), Expect = 5.520e-49 Identity = 86/113 (76.11%), Postives = 100/113 (88.50%), Query Frame = 1
Query: 262 IQTLDLQHNRINDVEVMEIVSSMNDLRVLYLQGNPVVKLIRHYRKTLVSRCPNLKYLDDRPVFEEERRRCVAWSSGMAEGGLPCAQEAERGEMAKIREEKRANEERQYLTFEE 600
++TLD+QHNRIND +V++IVS+M+DLRVLYLQGNPVVK IRHYRKTLVS+C LKYLDDRPVF++ER RC AWS GMAEGG+ AQEAER EMAKIRE KRA E+RQYL FE+
Sbjct: 88 LETLDVQHNRINDPDVVDIVSAMHDLRVLYLQGNPVVKSIRHYRKTLVSKCATLKYLDDRPVFDDERCRCAAWSKGMAEGGISRAQEAEREEMAKIRESKRAAEQRQYLAFEQ 200
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Match: A0A7S3Y6C6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C6_HETAK) HSP 1 Score: 148 bits (374), Expect = 5.580e-40 Identity = 74/127 (58.27%), Postives = 98/127 (77.17%), Query Frame = 1
Query: 223 TSDDVRQVLQCPSIQTLDLQHNRINDVEVMEIVSSMNDLRVLYLQGNPVVKLIRHYRKTLVSRCPNLKYLDDRPVFEEERRRCVAWSSGMAEGG-LPCAQEAERGEMAKIREEKRANEERQYLTFEE 600
T+D VL+ PS++TLD+QHN+I+DV ++++V++M +LRVLYLQGNPVVK +RHYRK+LVS C L+YLDDRPVFE+ERRR AW+ G GG L A AER E+ ++REEKR EER +L E+
Sbjct: 134 TADXXXXVLEVPSLETLDIQHNKIDDVGIVDVVTTMPNLRVLYLQGNPVVKDVRHYRKSLVSGCRELRYLDDRPVFEDERRRTDAWARGFRAGGTLDAANAAEREEIRRVREEKRCAEERNFLAMEQ 260
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Match: T0QTZ5_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QTZ5_SAPDV) HSP 1 Score: 133 bits (334), Expect = 1.290e-33 Identity = 68/121 (56.20%), Postives = 91/121 (75.21%), Query Frame = 1
Query: 244 VLQCPSIQTLDLQHNRINDVEVMEIVSSMNDLRVLYLQGNPVVKLIRHYRKTLVSRCPNLKYLDDRPVFEEERRRCVAWSSGMAE--GGLPCAQEAERGEMAKIREEKRANEERQYLTFEE 600
VL+ P++ LD+Q NRI DV+V++I+++M +LRVLYLQGN VVK I+HYRKT++SRC L+YLDDRPVF+EERRR AW M E G + A EAER E+A IR+EK+ +E + FE+
Sbjct: 132 VLELPTLAVLDIQSNRIADVDVVDILAAMPNLRVLYLQGNDVVKHIKHYRKTIISRCKELRYLDDRPVFDEERRRVTAWGRVMEETNGDVDAALEAERAELALIRQEKKDKDEANFRYFED 252
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Match: A0A1V9YZD4_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YZD4_9STRA) HSP 1 Score: 131 bits (330), Expect = 4.670e-33 Identity = 68/124 (54.84%), Postives = 87/124 (70.16%), Query Frame = 1
Query: 247 LQCPSIQTLDLQHNRINDVEVMEIVSSMNDLRVLYLQGNPVVKLIRHYRKTLVSRCPNLKYLDDRPVFEEERRRCVAWSSGMAE--GGLPCAQEAERGEMAKIREEKRANEERQYLTFEEASSK 612
L+ PS+ LD+Q NRIND V+++++ M +LRVLYLQGN VVK I+ YRKT++ RC L+YLDDRPVF+EERRR AW M E G L A EAER E+A IR+EK+ +E + FEE K
Sbjct: 133 LEIPSLAVLDIQSNRINDATVVDVLAQMTNLRVLYLQGNDVVKHIKQYRKTIIYRCKELRYLDDRPVFDEERRRVTAWGRAMEETNGDLEAALEAERAELAVIRQEKKDKDEANFRYFEEMMRK 256
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Match: A0A8K1CJQ4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJQ4_PYTOL) HSP 1 Score: 131 bits (330), Expect = 1.360e-32 Identity = 68/121 (56.20%), Postives = 86/121 (71.07%), Query Frame = 1
Query: 244 VLQCPSIQTLDLQHNRINDVEVMEIVSSMNDLRVLYLQGNPVVKLIRHYRKTLVSRCPNLKYLDDRPVFEEERRRCVAWSSGM--AEGGLPCAQEAERGEMAKIREEKRANEERQYLTFEE 600
VL P + LD+Q NRIND +++EI++ M L+VLYLQGN VVK I+ YRKT++ RC LKYLDDRPVF+EERRR AW + A G AQEAER EM +IR+EKR + + +L FEE
Sbjct: 132 VLTLPKLAVLDIQSNRINDPKILEILAEMPSLKVLYLQGNDVVKHIKQYRKTMIYRCRKLKYLDDRPVFDEERRRVEAWGQALEAANGDYKAAQEAEREEMDRIRQEKRDRDHQNFLMFEE 252
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Match: F0YSA6_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YSA6_AURAN) HSP 1 Score: 125 bits (315), Expect = 1.770e-32 Identity = 67/124 (54.03%), Postives = 88/124 (70.97%), Query Frame = 1
Query: 232 DVRQVLQCPSIQTLDLQHNRINDVE-VMEIVSSMNDLRVLYLQGNPVVKLIRHYRKTLVSRCPNLKYLDDRPVFEEERRRCVAWSSGMAEGG-LPCAQEAERGEMAKIREEKRANEERQYLTFE 597
++ VL P++ TLD+Q N + D E V+ I M DLRVLY QGNP VK +R+YRK ++S L+YLDDRPVFE+ERRRC AW+ G AEGG L A EAER E+A+IR +K+A E+++ FE
Sbjct: 45 EIEHVLLLPALSTLDVQANGLADGEGVLAIFKQMPDLRVLYCQGNPFVKELRNYRKRMISEIKTLRYLDDRPVFEDERRRCEAWARGFAEGGTLDAANEAERAEIAQIRADKKAAEDKRVRDFE 168
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Match: A0A7S0K1K9_CAFRO (Hypothetical protein (Fragment) n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0K1K9_CAFRO) HSP 1 Score: 126 bits (317), Expect = 6.290e-32 Identity = 63/126 (50.00%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 220 ETSDDVRQVLQCPSIQTLDLQHNRINDVEVMEIVSSMNDLRVLYLQGNPVVKLIRHYRKTLVSRCPNLKYLDDRPVFEEERRRCVAWSSGMAEGGLPCAQEAERGEMAKIREEKRANEERQYLTFE 597
ET++D+R V P++ LDL+ N I+D V++++++M LRVLYLQGNPVVK IRHYRKT++SR L++LDDRPVF+EER R AW++GM GG A ER +A ++ R +ER + FE
Sbjct: 127 ETAEDIRAVADLPALACLDLKGNIIDDPAVLDVLAAMPSLRVLYLQGNPVVKRIRHYRKTVISRLEGLRFLDDRPVFDEERERVTAWAAGMKAGGSKEAAARERATIAAQKQRAREADERNFRAFE 252
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Match: K3WU80_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WU80_GLOUD) HSP 1 Score: 125 bits (315), Expect = 3.210e-31 Identity = 64/120 (53.33%), Postives = 85/120 (70.83%), Query Frame = 1
Query: 247 LQCPSIQTLDLQHNRINDVEVMEIVSSMNDLRVLYLQGNPVVKLIRHYRKTLVSRCPNLKYLDDRPVFEEERRRCVAWSSGM--AEGGLPCAQEAERGEMAKIREEKRANEERQYLTFEE 600
L P++ LD+Q NR+ DV +++I++ M +L+VLYLQGN VVK I+ YRKTLV RC LKYLDDRPVF++ERRR AW + ++G AQEAER EM IR EK+ +E +L FE+
Sbjct: 133 LTLPNLSVLDIQSNRVTDVNIVDILAQMPELKVLYLQGNDVVKHIKQYRKTLVYRCRKLKYLDDRPVFDDERRRVEAWGKALDASQGDYKAAQEAERDEMDAIRREKKERDELNFLHFEQ 252
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Match: A0A812VQF0_9DINO (DNAAF1 protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812VQF0_9DINO) HSP 1 Score: 126 bits (317), Expect = 3.210e-31 Identity = 63/126 (50.00%), Postives = 88/126 (69.84%), Query Frame = 1
Query: 220 ETSDDVRQVLQCPSIQTLDLQHNRINDVEVMEIVSSMNDLRVLYLQGNPVVKLIRHYRKTLVSRCPNLKYLDDRPVFEEERRRCVAWSSGMAEGGLPCAQEAERGEMAKIREEKRANEERQYLTFE 597
ET++D+R V P++ LDL+ N I+D V++++++M LRVLYLQGNPVVK IRHYRKT++SR L++LDDRPVF+EER R AW++GM GG A ER +A ++ R +ER + FE
Sbjct: 191 ETAEDIRAVADLPALACLDLKGNIIDDPAVLDVLAAMPSLRVLYLQGNPVVKRIRHYRKTVISRLEGLRFLDDRPVFDEERERVTAWAAGMKAGGSKEAAARERATIAAQKQRAREADERNFRAFE 316
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Match: A0A024TEQ5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TEQ5_9STRA) HSP 1 Score: 126 bits (316), Expect = 6.020e-31 Identity = 66/120 (55.00%), Postives = 87/120 (72.50%), Query Frame = 1
Query: 247 LQCPSIQTLDLQHNRINDVEVMEIVSSMNDLRVLYLQGNPVVKLIRHYRKTLVSRCPNLKYLDDRPVFEEERRRCVAWSSGMAE--GGLPCAQEAERGEMAKIREEKRANEERQYLTFEE 600
LQ PS+ LD+Q NRI D V++I++ M +LRVLYLQGN VVK I+ YRKT+V+RC NL+YLDDRPVF++ERRR AW + E G + A +AER E+A IR+EK+ +E + FEE
Sbjct: 132 LQIPSLSVLDIQSNRIADPAVLDILAQMPNLRVLYLQGNDVVKHIKQYRKTVVARCKNLRYLDDRPVFDDERRRVNAWYKALEETNGDMEAALQAERDELAVIRQEKKDKDEANFRYFEE 251 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6210.13950.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6210.13950.1 >prot_H-paniculata_contig6210.13950.1 ID=prot_H-paniculata_contig6210.13950.1|Name=mRNA_H-paniculata_contig6210.13950.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp WLEGNGLTKLQGMKAQTDLRTLYAHENLIEKIEGLDSCLQLDTLNLSKNFback to top mRNA from alignment at H-paniculata_contig6210:861..2395+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6210.13950.1 ID=mRNA_H-paniculata_contig6210.13950.1|Name=mRNA_H-paniculata_contig6210.13950.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1535bp|location=Sequence derived from alignment at H-paniculata_contig6210:861..2395+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6210:861..2395+ >mRNA_H-paniculata_contig6210.13950.1 ID=mRNA_H-paniculata_contig6210.13950.1|Name=mRNA_H-paniculata_contig6210.13950.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at H-paniculata_contig6210:861..2395+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |