prot_H-paniculata_contig61972.13927.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61972.13927.1
Unique Nameprot_H-paniculata_contig61972.13927.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length53
Homology
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Match: A0A6H5LLS9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LLS9_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 3.580e-14
Identity = 30/56 (53.57%), Postives = 39/56 (69.64%), Query Frame = 0
Query:    1 MTAIVSEIICYYCNKPGHVKRKCPQLKGKLKTKIP---GAKWCSVHNTTTHSDEEC 53
            M    S+IIC+ C +PGH++R CP++K + K K     G KWCS HNTT+HSDEEC
Sbjct:  122 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGGTKWCSKHNTTSHSDEEC 177          
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Match: A0A6H5KZM5_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZM5_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 5.070e-14
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MTAIVSEIICYYCNKPGHVKRKCPQLKG--KLKTKIPGA-KWCSVHNTTTHSDEEC 53
            M    S+IIC+ C +PGH++R CP++K   K KTK  GA KWCS HNTT+HSDEEC
Sbjct:   99 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEEC 154          
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Match: A0A6H5JF66_9PHAE (CCHC-type domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF66_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 6.750e-14
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MTAIVSEIICYYCNKPGHVKRKCPQLKG--KLKTKIPGA-KWCSVHNTTTHSDEEC 53
            M    S+IIC+ C +PGH++R CP++K   K KTK  GA KWCS HNTT+HSDEEC
Sbjct:  236 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEEC 291          
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Match: A0A6H5KP59_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP59_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 7.750e-14
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MTAIVSEIICYYCNKPGHVKRKCPQLKG--KLKTKIPGA-KWCSVHNTTTHSDEEC 53
            M    S+IIC+ C +PGH++R CP++K   K KTK  GA KWCS HNTT+HSDEEC
Sbjct:   47 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEEC 102          
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Match: A0A6H5JQY8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQY8_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 8.170e-14
Identity = 36/58 (62.07%), Postives = 40/58 (68.97%), Query Frame = 0
Query:    1 MTAIVSEIICYYCNKPGHVKRKCPQLKGK----LKTKIPGA-KWCSVHNTTTHSDEEC 53
            M    S  IC+ CN+PGHV+R CP L+ K     KTK  GA KWCSVHNTTTHSDEEC
Sbjct:   26 MATKTSGPICFECNEPGHVRRNCPNLQRKGHMARKTKPAGATKWCSVHNTTTHSDEEC 83          
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Match: A0A6H5JZ53_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ53_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 8.250e-14
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MTAIVSEIICYYCNKPGHVKRKCPQLKG--KLKTKIPGA-KWCSVHNTTTHSDEEC 53
            M    S+IIC+ C +PGH++R CP++K   K KTK  GA KWCS HNTT+HSDEEC
Sbjct:   99 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEEC 154          
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Match: A0A6H5L580_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L580_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 8.280e-14
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MTAIVSEIICYYCNKPGHVKRKCPQLKG--KLKTKIPGA-KWCSVHNTTTHSDEEC 53
            M    S+IIC+ C +PGH++R CP++K   K KTK  GA KWCS HNTT+HSDEEC
Sbjct:  254 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEEC 309          
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Match: A0A6H5KMG5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMG5_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 8.290e-14
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MTAIVSEIICYYCNKPGHVKRKCPQLKG--KLKTKIPGA-KWCSVHNTTTHSDEEC 53
            M    S+IIC+ C +PGH++R CP++K   K KTK  GA KWCS HNTT+HSDEEC
Sbjct:   29 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEEC 84          
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Match: A0A6H5K9Y0_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9Y0_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 8.300e-14
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MTAIVSEIICYYCNKPGHVKRKCPQLKG--KLKTKIPGA-KWCSVHNTTTHSDEEC 53
            M    S+IIC+ C +PGH++R CP++K   K KTK  GA KWCS HNTT+HSDEEC
Sbjct:  239 MATTASDIICHSCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEEC 294          
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Match: A0A6H5J8P7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J8P7_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 8.300e-14
Identity = 33/56 (58.93%), Postives = 41/56 (73.21%), Query Frame = 0
Query:    1 MTAIVSEIICYYCNKPGHVKRKCPQLKG--KLKTKIPGA-KWCSVHNTTTHSDEEC 53
            M    S+IIC+ C +PGH++R CP++K   K KTK  GA KWCS HNTT+HSDEEC
Sbjct:  247 MATTASDIICHRCYEPGHIRRNCPKIKNRAKKKTKPAGATKWCSKHNTTSHSDEEC 302          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61972.13927.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LLS9_9PHAE3.580e-1453.57CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KZM5_9PHAE5.070e-1458.93CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JF66_9PHAE6.750e-1458.93CCHC-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A6H5KP59_9PHAE7.750e-1458.93CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JQY8_9PHAE8.170e-1462.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JZ53_9PHAE8.250e-1458.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L580_9PHAE8.280e-1458.93CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KMG5_9PHAE8.290e-1458.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9Y0_9PHAE8.300e-1458.93Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5J8P7_9PHAE8.300e-1458.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 9..25
e-value: 3.0E-4
score: 30.1
IPR001878Zinc finger, CCHC-typePFAMPF00098zf-CCHCcoord: 9..25
e-value: 1.1E-6
score: 28.4
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 10..25
score: 10.279
NoneNo IPR availableGENE3D4.10.60.10coord: 3..35
e-value: 7.7E-8
score: 34.1
IPR036875Zinc finger, CCHC-type superfamilySUPERFAMILY57756Retrovirus zinc finger-like domainscoord: 6..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61972contigH-paniculata_contig61972:295..453 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61972.13927.1mRNA_H-paniculata_contig61972.13927.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61972 295..453 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61972.13927.1 ID=prot_H-paniculata_contig61972.13927.1|Name=mRNA_H-paniculata_contig61972.13927.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=53bp
MTAIVSEIICYYCNKPGHVKRKCPQLKGKLKTKIPGAKWCSVHNTTTHSD
EEC
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001878Znf_CCHC
IPR036875Znf_CCHC_sf