prot_H-paniculata_contig61954.13925.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61954.13925.1
Unique Nameprot_H-paniculata_contig61954.13925.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length84
Homology
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BLAST of mRNA_H-paniculata_contig61954.13925.1 vs. uniprot
Match: D7FXC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXC9_ECTSI)

HSP 1 Score: 80.1 bits (196), Expect = 8.380e-16
Identity = 45/84 (53.57%), Postives = 54/84 (64.29%), Query Frame = 0 
Query:    1 RKRVSPEETASVTHVKDGSHGPFSTCSLVYRPLSIASALSQSGSVLPGESVTTAIYFNARQQLDPPPHLVNMIFRGFEEQREIL 84
            R RV P ET +VT +KD + G   T +LVYRPLS  SALSQSG+V PGES  TA Y+N RQ +D P  LVN +   F + R  L
Sbjct:  143 RNRVPPGETQAVTRMKDINGGALGTTTLVYRPLSAQSALSQSGAVGPGESSATAAYYNPRQHVDVPDGLVNHVLPRFMDVRRQL 226
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61954.13925.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXC9_ECTSI8.380e-1653.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61954contigH-paniculata_contig61954:1..252 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61954.13925.1mRNA_H-paniculata_contig61954.13925.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61954 1..252 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61954.13925.1 ID=prot_H-paniculata_contig61954.13925.1|Name=mRNA_H-paniculata_contig61954.13925.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=84bp
RKRVSPEETASVTHVKDGSHGPFSTCSLVYRPLSIASALSQSGSVLPGES
VTTAIYFNARQQLDPPPHLVNMIFRGFEEQREIL
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