prot_H-paniculata_contig6195.13924.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6195.13924.1
Unique Nameprot_H-paniculata_contig6195.13924.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length238
Homology
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BLAST of mRNA_H-paniculata_contig6195.13924.1 vs. uniprot
Match: D7FZ68_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZ68_ECTSI)

HSP 1 Score: 169 bits (428), Expect = 3.790e-46
Identity = 114/226 (50.44%), Postives = 135/226 (59.73%), Query Frame = 0 
Query:   15 MDGVVRGEEEEVFETPDIALSEDGIAMETGGPATKDGRNDNVNKVADAEVVSSFVPPQTAFEVFMGKTYAGPREDMSDAIGAAVRAADG---AVYTAKGYRRDTAD-------DAAGDTRTGMDAPGGASKDRKAISAERRSALRTGESPVQWLLRLREETALLTEDLEEMSKPYRSESGNGDDGVHDNDADDGDAGGYALWSAMAKETEALQRQLAALSGDPRYK 230
            M    RG EEEVFETPD+   EDG+   + G       +   NKV DAEVV SFVPPQ AFEVFMG+TYAG REDMSD +GA          AVY  +GY R  A            +T  G+             S  RR   RTGESP+Q L+RLREETA+L EDLEEMSK  R++     +G  +++     AGGY+LWSAMAKETEAL+RQLA LSGDPR+K
Sbjct:    1 MASSARGAEEEVFETPDVG--EDGLEQHSEGEIPNPTLSKTGNKVPDAEVVESFVPPQAAFEVFMGRTYAGAREDMSDVVGAXXXXXXXXXXAVYEGEGYHRPLAGAPXXXXXXXXXETAXGVR--------XXXXSGPRR---RTGESPLQRLVRLREETAMLAEDLEEMSKARRTDRAGDAEGAQESEGGAA-AGGYSLWSAMAKETEALKRQLALLSGDPRFK 212
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6195.13924.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FZ68_ECTSI3.790e-4650.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6195contigH-paniculata_contig6195:230..12278 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6195.13924.1mRNA_H-paniculata_contig6195.13924.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6195 230..12278 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6195.13924.1 ID=prot_H-paniculata_contig6195.13924.1|Name=mRNA_H-paniculata_contig6195.13924.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=238bp
RFSSSILAPLQPKNMDGVVRGEEEEVFETPDIALSEDGIAMETGGPATKD
GRNDNVNKVADAEVVSSFVPPQTAFEVFMGKTYAGPREDMSDAIGAAVRA
ADGAVYTAKGYRRDTADDAAGDTRTGMDAPGGASKDRKAISAERRSALRT
GESPVQWLLRLREETALLTEDLEEMSKPYRSESGNGDDGVHDNDADDGDA
GGYALWSAMAKETEALQRQLAALSGDPRYKVGLNVPF*
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