prot_H-paniculata_contig6192.13920.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6192.13920.1
Unique Nameprot_H-paniculata_contig6192.13920.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length218
Homology
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: D7FVT6_ECTSI (S1-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT6_ECTSI)

HSP 1 Score: 145 bits (366), Expect = 1.450e-39
Identity = 103/212 (48.58%), Postives = 122/212 (57.55%), Query Frame = 0
Query:    1 MLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWPDAPAFRTAVVG-----KDPRDNWGQVIAKNPANSNKSNDDANNIQPEESNTEAGELRGKAGCAGDSGLEGGKANEPMAAGTGGVDSSYGSGGDRRDGGQGVXXXXXXXXXXXXX------------VSDLYVNNNRLAMMQL 195
            MLA+GE +LA+LPT+FRKLIWVKRGDYLITSTS GDFETSAGE GKVRHRVEHILNKDQIKHLKK+ LWP   AF  A++        PRD WG  +A    +S                 ++G  +G    A +   E G     +AA     +   GSG   + GG G       XXXXXXX            +SDL+VNNNR AMM+L
Sbjct:   46 MLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILNKDQIKHLKKRELWPADDAFGGALLAAGAGSSGPRDGWGDAVADGGGSS-----------------DSGGSKGMGAAAIE---EKGNXXXEVAATAATAEKEVGSG--VKVGGDGAGEVPSGXXXXXXXXXXXXXXXXXXXMSDLFVNNNRAAMMRL 235          
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A4D9CWY1_9STRA (S1-like domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWY1_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 1.810e-21
Identity = 43/63 (68.25%), Postives = 54/63 (85.71%), Query Frame = 0
Query:    8 ALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWP 70
            +LA+LPTKFRKLIWVKRGD++I S +  DF+T+AGE GKV+  VEHIL K+Q+KHLK QG+WP
Sbjct:   63 SLALLPTKFRKLIWVKRGDFVIVSGTSHDFQTAAGEKGKVKFMVEHILYKEQVKHLKDQGMWP 125          
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A812LGH3_9DINO (Eif1ad protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LGH3_9DINO)

HSP 1 Score: 95.5 bits (236), Expect = 6.510e-21
Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 0
Query:    3 ASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWP 70
            A GE A  ILPTK+RKLIWVKRGD+LI S    D++T++G  G V++ VEHIL    IKHLKK+GLWP
Sbjct:   48 AEGENAKCILPTKYRKLIWVKRGDFLIVSKGAEDYDTASGNKGTVKYMVEHILTASSIKHLKKEGLWP 115          
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A196SLW6_BLAHN (RNA-binding protein EIF1AD n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SLW6_BLAHN)

HSP 1 Score: 92.8 bits (229), Expect = 4.010e-20
Identity = 40/69 (57.97%), Postives = 52/69 (75.36%), Query Frame = 0
Query:    2 LASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWP 70
            L  G++ LAILPTKF KLIW+KRGDY+I + S G F TS+G+   V   ++HIL KDQ+ H+KK+GLWP
Sbjct:   47 LPDGQKVLAILPTKFNKLIWMKRGDYVIVTKSEGQFTTSSGKQNGVESMIQHILLKDQVNHIKKEGLWP 115          
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: D8M3Q1_BLAHO (S1-like domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M3Q1_BLAHO)

HSP 1 Score: 92.8 bits (229), Expect = 5.650e-20
Identity = 41/69 (59.42%), Postives = 53/69 (76.81%), Query Frame = 0
Query:    2 LASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWP 70
            L +GE+ LA+LPTKF KLIW+KRGDY+I + S G F T++G+   V   +EHIL KDQI H+KK+GLWP
Sbjct:   47 LPNGEKQLALLPTKFNKLIWMKRGDYVIVTESEGQFTTASGKQNGVSSLIEHILMKDQIHHIKKEGLWP 115          
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A7S1GDQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDQ2_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.520e-20
Identity = 40/69 (57.97%), Postives = 51/69 (73.91%), Query Frame = 0
Query:    4 SGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWPDA 72
            +GE  L +LPT++RKL+WVKRGD+LI   +  DFET+ G+ G VR  V H+L KDQ+KHLKK G WP A
Sbjct:   49 AGEGGLCMLPTRYRKLVWVKRGDHLIVDCADDDFETAGGDKGAVRFSVAHVLYKDQVKHLKKIGKWPAA 117          
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A835YV91_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV91_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 2.420e-18
Identity = 49/116 (42.24%), Postives = 59/116 (50.86%), Query Frame = 0
Query:    2 LASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSA-----------------------------------------------GEAGKVRHRVEHILNKDQIKHLKKQGLWP 70
            L  GEQ+LA+LPT+FRKLIWVKRGDY++ STS GD ET                                                 GE GKVRHRVEH+L+KDQ+KH++K G WP
Sbjct:   47 LQCGEQSLAMLPTRFRKLIWVKRGDYVLVSTSTGDIETHTAAAAAHARYAVQCNAPAYRPAQRGAHASKPALRRRRSYRAVRTSALDGEEGKVRHRVEHVLSKDQVKHIRKIGKWP 162          
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A8K1C280_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C280_PYTOL)

HSP 1 Score: 85.1 bits (209), Expect = 5.220e-17
Identity = 41/68 (60.29%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    3 ASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWP 70
            A   ++L +LPTKFRKLIWVKRGD+LI S   GD  TS G+ G V   VE IL KDQIK+L+ +GLWP
Sbjct:   48 ADASKSLTMLPTKFRKLIWVKRGDFLIVSGGDGDITTSEGKKGAVTSIVEAILYKDQIKNLRAKGLWP 115          
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A6A4G9K3_9STRA (S1-like domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G9K3_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 6.360e-17
Identity = 50/100 (50.00%), Postives = 60/100 (60.00%), Query Frame = 0
Query:    3 ASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSA-GEAGKVRHRVEHILNKDQIKHLKKQGLWP---DAPAFRTAVVGKDPRDNWGQVIAKNPAN 98
            A G +A+ +LPTKFRKLIWVKRGD+LI     G   T+A G+ G V   VEHIL KDQIK+LK++ LWP   D P+  TA         W QV   N  N
Sbjct:   48 AEGTKAVTMLPTKFRKLIWVKRGDFLIVGEGDGGEATTAKGKKGAVTSIVEHILYKDQIKNLKRKELWPAAFDDPSVSTA---------WAQVDDPNDDN 138          
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A7R9Z7D1_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z7D1_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 8.520e-17
Identity = 37/68 (54.41%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    9 LAILPTKFRKLIWVKRGDYLITSTSV-GDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWPDAPAF 75
            LAILPTKFRKL+W+KR D++I      GD +      G +R+++EHIL K+Q+KHLKK+GLWP  P F
Sbjct:   48 LAILPTKFRKLVWLKRNDFVIVRCGDDGDGDEKTDTTGSIRYQIEHILYKEQVKHLKKEGLWPSDPFF 115          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVT6_ECTSI1.450e-3948.58S1-like domain-containing protein n=2 Tax=Ectocarp... [more]
A0A4D9CWY1_9STRA1.810e-2168.25S1-like domain-containing protein n=3 Tax=Monodops... [more]
A0A812LGH3_9DINO6.510e-2161.76Eif1ad protein n=1 Tax=Symbiodinium sp. KB8 TaxID=... [more]
A0A196SLW6_BLAHN4.010e-2057.97RNA-binding protein EIF1AD n=1 Tax=Blastocystis sp... [more]
D8M3Q1_BLAHO5.650e-2059.42S1-like domain-containing protein n=1 Tax=Blastocy... [more]
A0A7S1GDQ2_9STRA6.520e-2057.97Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A835YV91_9STRA2.420e-1842.24S1-like domain-containing protein n=1 Tax=Tribonem... [more]
A0A8K1C280_PYTOL5.220e-1760.29Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6A4G9K3_9STRA6.360e-1750.00S1-like domain-containing protein n=1 Tax=Phytopht... [more]
A0A7R9Z7D1_9STRA8.520e-1754.41Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001253Translation initiation factor 1A (eIF-1A)SMARTSM00652eIF1neu4coord: 1..70
e-value: 0.0023
score: 11.5
NoneNo IPR availableGENE3D2.40.50.140coord: 1..121
e-value: 3.9E-16
score: 60.9
IPR039294Probable RNA-binding protein EIF1ADPANTHERPTHR21641TRANSLATION INITIATION FACTOR-RELATEDcoord: 1..117
IPR006196RNA-binding domain, S1, IF1 typePROSITEPS50832S1_IF1_TYPEcoord: 1..52
score: 8.812
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 1..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6192contigH-paniculata_contig6192:1018..2210 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6192.13920.1mRNA_H-paniculata_contig6192.13920.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6192 1012..2484 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6192.13920.1 ID=prot_H-paniculata_contig6192.13920.1|Name=mRNA_H-paniculata_contig6192.13920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp
MLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHR
VEHILNKDQIKHLKKQGLWPDAPAFRTAVVGKDPRDNWGQVIAKNPANSN
KSNDDANNIQPEESNTEAGELRGKAGCAGDSGLEGGKANEPMAAGTGGVD
SSYGSGGDRRDGGQGVVVDEEEEEEEEDDVSDLYVNNNRLAMMQLRTDHD
DDDDDDEQDSDSEDETD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001253TIF_eIF-1A
IPR039294EIF1AD
IPR006196RNA-binding_domain_S1_IF1
IPR012340NA-bd_OB-fold