mRNA_H-paniculata_contig6192.13920.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: D7FVT6_ECTSI (S1-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVT6_ECTSI) HSP 1 Score: 148 bits (373), Expect = 2.120e-39 Identity = 104/214 (48.60%), Postives = 124/214 (57.94%), Query Frame = 1
Query: 1 QIMLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWPDAPAFRTAVVG-----KDPRDNWGQVIAKNPANSNKSNDDANNIQPEESNTEAGELRGKAGCAGDSGLEGGKANEPMAAGTGGVDSSYGSGGDRRDGGQGVXXXXXXXXXXXXX------------VSDLYVNNNRLAMMQL 591
+IMLA+GE +LA+LPT+FRKLIWVKRGDYLITSTS GDFETSAGE GKVRHRVEHILNKDQIKHLKK+ LWP AF A++ PRD WG +A +S ++G +G A + E G +AA + GSG + GG G XXXXXXX +SDL+VNNNR AMM+L
Sbjct: 44 EIMLANGEPSLALLPTRFRKLIWVKRGDYLITSTSAGDFETSAGETGKVRHRVEHILNKDQIKHLKKRELWPADDAFGGALLAAGAGSSGPRDGWGDAVADGGGSS-----------------DSGGSKGMGAAAIE---EKGNXXXEVAATAATAEKEVGSG--VKVGGDGAGEVPSGXXXXXXXXXXXXXXXXXXXMSDLFVNNNRAAMMRL 235
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A4D9CWY1_9STRA (S1-like domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWY1_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 1.070e-20 Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 1
Query: 16 SGEQ----ALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWP 216
SGE +LA+LPTKFRKLIWVKRGD++I S + DF+T+AGE GKV+ VEHIL K+Q+KHLK QG+WP
Sbjct: 55 SGEDENGGSLALLPTKFRKLIWVKRGDFVIVSGTSHDFQTAAGEKGKVKFMVEHILYKEQVKHLKDQGMWP 125
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A812LGH3_9DINO (Eif1ad protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812LGH3_9DINO) HSP 1 Score: 95.9 bits (237), Expect = 3.620e-20 Identity = 42/68 (61.76%), Postives = 51/68 (75.00%), Query Frame = 1
Query: 13 ASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWP 216
A GE A ILPTK+RKLIWVKRGD+LI S D++T++G G V++ VEHIL IKHLKK+GLWP
Sbjct: 48 AEGENAKCILPTKYRKLIWVKRGDFLIVSKGAEDYDTASGNKGTVKYMVEHILTASSIKHLKKEGLWP 115
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A196SLW6_BLAHN (RNA-binding protein EIF1AD n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SLW6_BLAHN) HSP 1 Score: 94.4 bits (233), Expect = 7.750e-20 Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 1
Query: 1 QIMLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWP 216
++ L G++ LAILPTKF KLIW+KRGDY+I + S G F TS+G+ V ++HIL KDQ+ H+KK+GLWP
Sbjct: 44 EVELPDGQKVLAILPTKFNKLIWMKRGDYVIVTKSEGQFTTSSGKQNGVESMIQHILLKDQVNHIKKEGLWP 115
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: D8M3Q1_BLAHO (S1-like domain-containing protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M3Q1_BLAHO) HSP 1 Score: 94.4 bits (233), Expect = 1.100e-19 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 1 QIMLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWP 216
++ L +GE+ LA+LPTKF KLIW+KRGDY+I + S G F T++G+ V +EHIL KDQI H+KK+GLWP
Sbjct: 44 EVELPNGEKQLALLPTKFNKLIWMKRGDYVIVTESEGQFTTASGKQNGVSSLIEHILMKDQIHHIKKEGLWP 115
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A7S1GDQ2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GDQ2_9STRA) HSP 1 Score: 92.0 bits (227), Expect = 2.350e-19 Identity = 40/73 (54.79%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 4 IMLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWPDA 222
++ +GE L +LPT++RKL+WVKRGD+LI + DFET+ G+ G VR V H+L KDQ+KHLKK G WP A
Sbjct: 45 VVTEAGEGGLCMLPTRYRKLVWVKRGDHLIVDCADDDFETAGGDKGAVRFSVAHVLYKDQVKHLKKIGKWPAA 117
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A835YV91_9STRA (S1-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV91_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 4.750e-18 Identity = 49/119 (41.18%), Postives = 61/119 (51.26%), Query Frame = 1
Query: 1 QIMLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSA-----------------------------------------------GEAGKVRHRVEHILNKDQIKHLKKQGLWP 216
++ L GEQ+LA+LPT+FRKLIWVKRGDY++ STS GD ET GE GKVRHRVEH+L+KDQ+KH++K G WP
Sbjct: 44 EVELQCGEQSLAMLPTRFRKLIWVKRGDYVLVSTSTGDIETHTAAAAAHARYAVQCNAPAYRPAQRGAHASKPALRRRRSYRAVRTSALDGEEGKVRHRVEHVLSKDQVKHIRKIGKWP 162
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A7S2UVE6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVE6_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 1.040e-16 Identity = 41/73 (56.16%), Postives = 53/73 (72.60%), Query Frame = 1
Query: 1 QIMLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILN-KDQIKHLKKQGLWP 216
Q+ G +ALA+LPTKFRKLIWVKRGD+LI S S GD T++G +GKV+ V H+L+ +DQ HL+ G WP
Sbjct: 43 QVQCPDGTKALAMLPTKFRKLIWVKRGDFLIVSESQGDVSTASGGSGKVKFMVSHVLHSRDQRAHLQSTGHWP 115
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A8K1C280_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C280_PYTOL) HSP 1 Score: 85.9 bits (211), Expect = 1.650e-16 Identity = 41/72 (56.94%), Postives = 51/72 (70.83%), Query Frame = 1
Query: 1 QIMLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRVEHILNKDQIKHLKKQGLWP 216
++ A ++L +LPTKFRKLIWVKRGD+LI S GD TS G+ G V VE IL KDQIK+L+ +GLWP
Sbjct: 44 EVQHADASKSLTMLPTKFRKLIWVKRGDFLIVSGGDGDITTSEGKKGAVTSIVEAILYKDQIKNLRAKGLWP 115
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Match: A0A6A4G9K3_9STRA (S1-like domain-containing protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G9K3_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 2.010e-16 Identity = 50/104 (48.08%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 1 QIMLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSA-GEAGKVRHRVEHILNKDQIKHLKKQGLWP---DAPAFRTAVVGKDPRDNWGQVIAKNPAN 300
+++ A G +A+ +LPTKFRKLIWVKRGD+LI G T+A G+ G V VEHIL KDQIK+LK++ LWP D P+ TA W QV N N
Sbjct: 44 EVVDAEGTKAVTMLPTKFRKLIWVKRGDFLIVGEGDGGEATTAKGKKGAVTSIVEHILYKDQIKNLKRKELWPAAFDDPSVSTA---------WAQVDDPNDDN 138 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6192.13920.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6192.13920.1 >prot_H-paniculata_contig6192.13920.1 ID=prot_H-paniculata_contig6192.13920.1|Name=mRNA_H-paniculata_contig6192.13920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=218bp MLASGEQALAILPTKFRKLIWVKRGDYLITSTSVGDFETSAGEAGKVRHRback to top mRNA from alignment at H-paniculata_contig6192:1012..2484+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6192.13920.1 ID=mRNA_H-paniculata_contig6192.13920.1|Name=mRNA_H-paniculata_contig6192.13920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1473bp|location=Sequence derived from alignment at H-paniculata_contig6192:1012..2484+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6192:1012..2484+ >mRNA_H-paniculata_contig6192.13920.1 ID=mRNA_H-paniculata_contig6192.13920.1|Name=mRNA_H-paniculata_contig6192.13920.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1308bp|location=Sequence derived from alignment at H-paniculata_contig6192:1012..2484+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |