prot_H-paniculata_contig619.13917.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig619.13917.1
Unique Nameprot_H-paniculata_contig619.13917.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length51
Homology
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BLAST of mRNA_H-paniculata_contig619.13917.1 vs. uniprot
Match: D7G071_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G071_ECTSI)

HSP 1 Score: 95.5 bits (236), Expect = 3.250e-23
Identity = 43/50 (86.00%), Postives = 47/50 (94.00%), Query Frame = 0 
Query:    1 GSSLLRSAVDCGALTIDNTFCLTGQCEACMAEIDGEVVLSCMVPVPDDGR 50
            GSSLL+SA +CGA+ IDNTFCLTGQCEACMAE+DGEVVLSCMVPVP DGR
Sbjct:  144 GSSLLKSATECGAMVIDNTFCLTGQCEACMAEVDGEVVLSCMVPVPADGR 193
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BLAST of mRNA_H-paniculata_contig619.13917.1 vs. uniprot
Match: A0A388KU81_CHABU (Uncharacterized protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388KU81_CHABU)

HSP 1 Score: 62.0 bits (149), Expect = 1.560e-11
Identity = 27/47 (57.45%), Postives = 38/47 (80.85%), Query Frame = 0 
Query:    1 GSSLLRSAVDCGALTIDNTFCLTGQCEACMAEID-GEVVLSCMVPVP 46
            GS++L++AV+ GALTIDN FCLTGQC+ C  E++ GE++ SCM  +P
Sbjct:    4 GSNILKAAVEAGALTIDNRFCLTGQCDVCCVEMEHGEIIRSCMHAIP 50
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig619.13917.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G071_ECTSI3.250e-2386.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A388KU81_CHABU1.560e-1157.45Uncharacterized protein n=1 Tax=Chara braunii TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13510Fer2_4coord: 18..47
e-value: 6.1E-5
score: 23.0
IPR012675Beta-grasp domain superfamilyGENE3D3.10.20.30coord: 3..50
e-value: 4.2E-5
score: 25.1
IPR0360102Fe-2S ferredoxin-like superfamilySUPERFAMILY542922Fe-2S ferredoxin-likecoord: 3..47

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig619contigH-paniculata_contig619:3672..3824 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig619.13917.1mRNA_H-paniculata_contig619.13917.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig619 3672..3824 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig619.13917.1 ID=prot_H-paniculata_contig619.13917.1|Name=mRNA_H-paniculata_contig619.13917.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=51bp
GSSLLRSAVDCGALTIDNTFCLTGQCEACMAEIDGEVVLSCMVPVPDDGR
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012675Beta-grasp_dom_sf
IPR0360102Fe-2S_ferredoxin-like_sf