prot_H-paniculata_contig6185.13913.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6185.13913.1
Unique Nameprot_H-paniculata_contig6185.13913.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length364
Homology
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BLAST of mRNA_H-paniculata_contig6185.13913.1 vs. uniprot
Match: D7FK01_ECTSI (BRCT domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK01_ECTSI)

HSP 1 Score: 118 bits (295), Expect = 5.910e-27
Identity = 63/137 (45.99%), Postives = 84/137 (61.31%), Query Frame = 0 
Query:   10 MVSGSSSAGCFQGKVFGLTGELPRRDIEATLKSNGAQISAIIHKRVSFVVCTPEAAKRRTQKARKACKYGIPLVSSDFLKACVMAKAVVDPSFFLVTGASAVATGVXXXXXXXXXXXVANNDARSIGERGGGVGMTS 146
            M   + + GC QGKVFGLTGEL R++++  LK++GA +SAIIHKRVSFV+CTP+A K  TQK RKA K+GIPLVS  F+ AC +A  VVD + F V   +     +            A NDA ++   G   G ++
Sbjct:    1 MAPQAGNGGCLQGKVFGLTGELARKELQPMLKAHGATVSAIIHKRVSFVLCTPDAVKYNTQKVRKALKHGIPLVSQGFIAACALAGDVVDSTPFRVVTTANAPASIPGASTLAGSNAKAPNDATAVSVEGSNSGSSA 137
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6185.13913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK01_ECTSI5.910e-2745.99BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001357BRCT domainSMARTSM00292BRCT_7coord: 17..95
e-value: 7.9E-8
score: 42.0
IPR001357BRCT domainPFAMPF12738PTCB-BRCTcoord: 27..86
e-value: 1.5E-5
score: 24.9
IPR001357BRCT domainPROSITEPS50172BRCTcoord: 15..105
score: 14.731
IPR036420BRCT domain superfamilyGENE3D3.40.50.10190coord: 20..132
e-value: 9.5E-12
score: 46.9
IPR036420BRCT domain superfamilySUPERFAMILY52113BRCT domaincoord: 16..104

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6185contigH-paniculata_contig6185:8989..11522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6185.13913.1mRNA_H-paniculata_contig6185.13913.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6185 8289..11541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6185.13913.1 ID=prot_H-paniculata_contig6185.13913.1|Name=mRNA_H-paniculata_contig6185.13913.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=364bp
MLGIGQQKAMVSGSSSAGCFQGKVFGLTGELPRRDIEATLKSNGAQISAI
IHKRVSFVVCTPEAAKRRTQKARKACKYGIPLVSSDFLKACVMAKAVVDP
SFFLVTGASAVATGVPAANEDVVKACVANNDARSIGERGGGVGMTSVLED
DDTCMNTAVDKKKKKKSKNERNQPSPRLNKRRRSRGGDDATVSLSLLSSE
LSGIEQKTEGLRNGDTESQGGLPKATAPEEKRKNKKSRKKSTSSRTGKKN
DMEHRNALSRSPHQDPPDDGDESMRNAGDVSGSTLSRRGSERCDIGDSAG
TAADVVDHSRVPRDCGAEEGVKGNGCQVEEVAPGEVEAPRAIVDRGELSK
KTKKRKKTEKKKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001357BRCT_dom
IPR036420BRCT_dom_sf