prot_H-paniculata_contig618.13905.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig618.13905.1
Unique Nameprot_H-paniculata_contig618.13905.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length75
Homology
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BLAST of mRNA_H-paniculata_contig618.13905.1 vs. uniprot
Match: A0A067CKU1_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CKU1_SAPPC)

HSP 1 Score: 76.3 bits (186), Expect = 5.890e-16
Identity = 38/73 (52.05%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:    1 CVDTVALITAKTEELGNS-GACMQCDPANNVCPPGCQALIDYLYVSCDGVTTPDGLFYDPNNIIEGTWSEQVR 72
            C   V  I A+ +  G+S G+CM CDPA N CP  CQ LI+ LYV CDGV +P GLF+DP   I G W+ QV 
Sbjct:   39 CASAVLAIAAQGD--GSSPGSCMSCDPAQNKCPAKCQPLINTLYVDCDGVYSPPGLFFDPAAKIHGYWNGQVN 109
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BLAST of mRNA_H-paniculata_contig618.13905.1 vs. uniprot
Match: D8LR01_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LR01_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 6.380e-9
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 0 
Query:   39 IDYLYVSCDGVTTPDGLFYDPNNIIEGTWSEQVR 72
            +D  Y  CDGVTTPDGL++DP+N IEG WS++V+
Sbjct:    1 MDNFYADCDGVTTPDGLYFDPDNAIEGEWSDKVK 34
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BLAST of mRNA_H-paniculata_contig618.13905.1 vs. uniprot
Match: A0A6H5JA51_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JA51_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 1.280e-8
Identity = 21/34 (61.76%), Postives = 28/34 (82.35%), Query Frame = 0 
Query:   39 IDYLYVSCDGVTTPDGLFYDPNNIIEGTWSEQVR 72
            +D LY  CDGVTTPDGL++DP+N IEG WS+++ 
Sbjct:    1 MDNLYSHCDGVTTPDGLYFDPDNAIEGEWSDKIE 34
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig618.13905.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A067CKU1_SAPPC5.890e-1652.05Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
D8LR01_ECTSI6.380e-961.76Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JA51_9PHAE1.280e-861.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig618contigH-paniculata_contig618:29539..30558 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig618.13905.1mRNA_H-paniculata_contig618.13905.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig618 29539..30558 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig618.13905.1 ID=prot_H-paniculata_contig618.13905.1|Name=mRNA_H-paniculata_contig618.13905.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=75bp
CVDTVALITAKTEELGNSGACMQCDPANNVCPPGCQALIDYLYVSCDGVT
TPDGLFYDPNNIIEGTWSEQVRTV*
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