mRNA_H-paniculata_contig6176.13901.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6176.13901.1
Unique NamemRNA_H-paniculata_contig6176.13901.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Match: D7G1K9_ECTSI (Catalase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1K9_ECTSI)

HSP 1 Score: 365 bits (938), Expect = 2.690e-122
Identity = 174/201 (86.57%), Postives = 187/201 (93.03%), Query Frame = 1
Query:    1 MARDKATSQIEDYAKTQTTSATMTSSNGRPLESLTESMTAGSGGPITIQDFTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVRVGHEEKG 603
            M RDKATSQIE++A+  ++  TMT SNGRPLESLTES TAG GGPIT+QD+TLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPEL+G+CK KMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWD+VGNNTPIFFIRDPILFPSFIHTQKRNP+THLKDPDMFWDFISLRPETTHQV     ++G
Sbjct:    1 MGRDKATSQIEEFARATSSGGTMTGSNGRPLESLTESQTAGPGGPITLQDYTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELKGLCKGKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDLVGNNTPIFFIRDPILFPSFIHTQKRNPRTHLKDPDMFWDFISLRPETTHQVSFLFSDRG 201          
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Match: A0A2Z5VL07_CHAMQ (Catalase n=1 Tax=Chattonella marina var. antiqua TaxID=859642 RepID=A0A2Z5VL07_CHAMQ)

HSP 1 Score: 332 bits (851), Expect = 2.360e-109
Identity = 160/201 (79.60%), Postives = 174/201 (86.57%), Query Frame = 1
Query:    1 MARDKATSQIEDYAKTQTTSATMTSSNGRPLESLTESMTAGSGGPITIQDFTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVRVGHEEKG 603
            M+RDKAT QI D+AK      T+TSSNG PL+ L  SMTAG  GPI +QDF+L+D+LAHFDRERIPERVVHAKGAGAFGYFEVTTPE    C++KMFS VGKRTPV VRFSTVGGESGSADTARDPRGFAVKFYSEEGNWD+VGNNTPIFFIRDPILFPSFIHTQKRNP+THL DPDMFWDFISLRPETTHQV     ++G
Sbjct:    1 MSRDKATEQIGDFAKDVIRQPTLTSSNGAPLDCLANSMTAGPRGPIVLQDFSLVDYLAHFDRERIPERVVHAKGAGAFGYFEVTTPEAAKFCRSKMFSRVGKRTPVGVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDLVGNNTPIFFIRDPILFPSFIHTQKRNPKTHLADPDMFWDFISLRPETTHQVSFLFSDRG 201          
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Match: A0A1B6G181_9HEMI (Catalase domain-containing protein (Fragment) n=1 Tax=Cuerna arida TaxID=1464854 RepID=A0A1B6G181_9HEMI)

HSP 1 Score: 317 bits (811), Expect = 4.140e-106
Identity = 150/201 (74.63%), Postives = 169/201 (84.08%), Query Frame = 1
Query:    1 MARDKATSQIEDYAKTQTTSATMTSSNGRPLESLTESMTAGSGGPITIQDFTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVRVGHEEKG 603
            M+R  A  Q+ED+ K Q T+  +TSSNG P+E  T S+T G  GPI +QDFTLID LAHFDRERIPERVVHAKGAGAFGYFEVT PE+   CKA +FS VGK+T V+VRFSTVGGESGSADT RDPRGFAVKFY+E+GNWD+VGNNTPIFF+RDP+LFPSFIHTQKRNPQTHLKD DMFWDFISLRPETTHQV     ++G
Sbjct:    1 MSRSPAEDQLEDFKKKQKTAPLLTSSNGAPVEDKTNSVTVGPNGPIVLQDFTLIDELAHFDRERIPERVVHAKGAGAFGYFEVTNPEITKYCKAALFSEVGKKTNVSVRFSTVGGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFVRDPVLFPSFIHTQKRNPQTHLKDADMFWDFISLRPETTHQVMFLFSDRG 201          
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Match: A0A6V2Q5M4_HETAK (Catalase n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2Q5M4_HETAK)

HSP 1 Score: 323 bits (828), Expect = 6.930e-106
Identity = 155/199 (77.89%), Postives = 170/199 (85.43%), Query Frame = 1
Query:    7 RDKATSQIEDYAKTQTTSATMTSSNGRPLESLTESMTAGSGGPITIQDFTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVRVGHEEKG 603
            RD A+ Q+  +AK       +TSSNG PL+SLT SMTAG  GPIT+QDF L+D+LAHFDRERIPERVVHAKGAGAFGYFEVTTPE    C+AKMF+ +GKRTPV VRFSTVGGESGSADTARDPRGFAVKFYSEEGNWD+VGNNTPIFFIRDP+LFPSFIHTQKRNPQTHL D DMFWDFISLRPETTHQV     ++G
Sbjct:    4 RDPASDQLNQHAKDVVRQPNLTSSNGAPLDSLTNSMTAGPRGPITLQDFNLVDYLAHFDRERIPERVVHAKGAGAFGYFEVTTPEAAKYCRAKMFNKLGKRTPVGVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDLVGNNTPIFFIRDPVLFPSFIHTQKRNPQTHLGDADMFWDFISLRPETTHQVSFLFSDRG 202          
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Match: A0A1B6HMA8_9HEMI (Catalase (Fragment) n=1 Tax=Homalodisca liturata TaxID=320908 RepID=A0A1B6HMA8_9HEMI)

HSP 1 Score: 318 bits (816), Expect = 4.720e-105
Identity = 150/201 (74.63%), Postives = 170/201 (84.58%), Query Frame = 1
Query:    1 MARDKATSQIEDYAKTQTTSATMTSSNGRPLESLTESMTAGSGGPITIQDFTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVRVGHEEKG 603
            M+R  A  Q+ED+ K Q T+  +TSSNG P+E  T S+T G  GPI +QDFTLID LAHFDRERIPERVVHAKGAGAFGYFEVT PE+   CKA +FS VGK+T ++VRFSTVGGESGSADT RDPRGFAVKFY+E+GNWD+VGNNTPIFF+RDP+LFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQV     ++G
Sbjct:   40 MSRSPAEDQLEDFKKKQQTAPLLTSSNGAPVEDKTNSVTVGPRGPIVLQDFTLIDELAHFDRERIPERVVHAKGAGAFGYFEVTNPEITKYCKAALFSEVGKKTNISVRFSTVGGESGSADTVRDPRGFAVKFYTEDGNWDLVGNNTPIFFVRDPVLFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVMFLFSDRG 240          
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Match: A0A1B6KIK7_9HEMI (Catalase (Fragment) n=3 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6KIK7_9HEMI)

HSP 1 Score: 321 bits (822), Expect = 5.720e-105
Identity = 151/201 (75.12%), Postives = 170/201 (84.58%), Query Frame = 1
Query:    1 MARDKATSQIEDYAKTQTTSATMTSSNGRPLESLTESMTAGSGGPITIQDFTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVRVGHEEKG 603
            M+R  A  Q+ED+ K Q T+ T+TSSNG P+E  T S T G  GPI +QDFTLID LAHFDRERIPERVVHAKGAGAFGYFEVT PE+   CKA +FS VGK+T ++VRFSTVGGESGSADT RDPRGFAVKFY++EGNWD+VGNNTPIFF+RDP+LFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQV     ++G
Sbjct:   45 MSRSPAEDQLEDFKKKQPTAPTLTSSNGAPVEDKTSSATVGPNGPIVLQDFTLIDELAHFDRERIPERVVHAKGAGAFGYFEVTNPEITKYCKAALFSEVGKKTNISVRFSTVGGESGSADTVRDPRGFAVKFYTDEGNWDLVGNNTPIFFVRDPVLFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVMFLFSDRG 245          
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Match: W7T2K9_9STRA (Catalase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T2K9_9STRA)

HSP 1 Score: 315 bits (806), Expect = 1.210e-102
Identity = 153/200 (76.50%), Postives = 172/200 (86.00%), Query Frame = 1
Query:    7 RDKATSQIEDYAKTQTTS-ATMTSSNGRPLESLTESMTAGSGGPITIQDFTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVRVGHEEKG 603
            RDK T+Q+E+YA +++ +    TSS+G PL+S+T S+TAG  GPI +QDF LID LAHFDRERIPERVVHAKGAGA GYFEVT+P +  IC+AK+FS VGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFY+EEGNWDMVGNNTPIFFIRDP LFPSFIHTQKRNP TH KDPD FWDFISLRPETTHQV     ++G
Sbjct:    4 RDKVTAQLENYAASRSAADGVATSSSGNPLDSVTTSLTAGPRGPILLQDFNLIDSLAHFDRERIPERVVHAKGAGALGYFEVTSPFISSICRAKLFSAVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYTEEGNWDMVGNNTPIFFIRDPALFPSFIHTQKRNPVTHCKDPDAFWDFISLRPETTHQVSFLFSDRG 203          
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Match: A0A7R9UAR8_9STRA (Catalase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UAR8_9STRA)

HSP 1 Score: 311 bits (798), Expect = 2.720e-101
Identity = 148/201 (73.63%), Postives = 172/201 (85.57%), Query Frame = 1
Query:    1 MARDKATSQIEDYAKTQTTSATMTSSNGRPLESLTESMTAGSGGPITIQDFTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVRVGHEEKG 603
            M+RD A++Q+E +AK Q   +T T S+G P +SL+ S TAG+ GPI ++DF L+D LAHFDRERIPERVVHAKGAGAFGYFEVT+PE++  C+A   + +GKRTPVAVRFSTVGGESGSADTARDPRG+AVKFY+EEGNWD+VGNNTPIFFIRDPILFPSFIHTQKRNP THLKDPD FWDFISLRPETTHQV     ++G
Sbjct:    1 MSRDSASNQLERFAKLQAGQSTATVSSGAPADSLSASRTAGARGPIVLEDFNLVDSLAHFDRERIPERVVHAKGAGAFGYFEVTSPEVQKYCRAAFLNELGKRTPVAVRFSTVGGESGSADTARDPRGYAVKFYTEEGNWDLVGNNTPIFFIRDPILFPSFIHTQKRNPGTHLKDPDAFWDFISLRPETTHQVSFLFSDRG 201          
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Match: A0A7S2V427_9STRA (Catalase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V427_9STRA)

HSP 1 Score: 310 bits (793), Expect = 1.340e-100
Identity = 149/201 (74.13%), Postives = 166/201 (82.59%), Query Frame = 1
Query:    1 MARDKATSQIEDYAKTQTTSATMTSSNGRPLESLTESMTAGSGGPITIQDFTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVRVGHEEKG 603
            M RDK  +QI+D  ++     T+T+SNG PL+SLT SMTAG  GPI +QDF L+D++AHFDRERIPERVVHAKGAGAFG+FE TT      CKAK    VGKRTPV +RFSTVGGESGSADTARDPRGFAVKFY+EEGNWDMVGNNTPIFFIRDP+LFPSFIHTQKRNPQTH KD DMFWDFISLRPETTHQV     ++G
Sbjct:    1 MNRDKVANQIKDQKESTIRPGTLTTSNGAPLDSLTASMTAGPKGPIVLQDFMLLDYIAHFDRERIPERVVHAKGAGAFGFFEATTTTGSQYCKAKFLDQVGKRTPVGIRFSTVGGESGSADTARDPRGFAVKFYTEEGNWDMVGNNTPIFFIRDPVLFPSFIHTQKRNPQTHCKDADMFWDFISLRPETTHQVSFLMSDRG 201          
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Match: A0A835YMK5_9STRA (Catalase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMK5_9STRA)

HSP 1 Score: 308 bits (789), Expect = 5.660e-100
Identity = 147/191 (76.96%), Postives = 164/191 (85.86%), Query Frame = 1
Query:    7 RDKATSQIEDYAKTQTTSATMTSSNGRPLESLTESMTAGSGGPITIQDFTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHVGKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIFFIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQV 579
            RDKA    ++YA  Q     +T+SNGRP+E++T S TAG  GPI +QDFTL+D LAHFDRERIPERVVHAKGAGAFGYFE TTPE    C+AKMF+  GKRTP+A+RFSTVGGES S DTARDPRGFA+KFY+EEGNWD+VGNNTPIFFIRDPILFPSFIHTQKRNP+THLKD DMFWDFISLRPETTHQV
Sbjct:    4 RDKAADAFKEYAA-QAPKQPLTTSNGRPIETITASQTAGPRGPILLQDFTLLDSLAHFDRERIPERVVHAKGAGAFGYFETTTPEAAKYCRAKMFASPGKRTPIALRFSTVGGESASPDTARDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPILFPSFIHTQKRNPKTHLKDADMFWDFISLRPETTHQV 193          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6176.13901.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G1K9_ECTSI2.690e-12286.57Catalase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
A0A2Z5VL07_CHAMQ2.360e-10979.60Catalase n=1 Tax=Chattonella marina var. antiqua T... [more]
A0A1B6G181_9HEMI4.140e-10674.63Catalase domain-containing protein (Fragment) n=1 ... [more]
A0A6V2Q5M4_HETAK6.930e-10677.89Catalase n=2 Tax=Heterosigma akashiwo TaxID=2829 R... [more]
A0A1B6HMA8_9HEMI4.720e-10574.63Catalase (Fragment) n=1 Tax=Homalodisca liturata T... [more]
A0A1B6KIK7_9HEMI5.720e-10575.12Catalase (Fragment) n=3 Tax=Cicadellinae TaxID=333... [more]
W7T2K9_9STRA1.210e-10276.50Catalase n=2 Tax=Monodopsidaceae TaxID=425072 RepI... [more]
A0A7R9UAR8_9STRA2.720e-10173.63Catalase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=... [more]
A0A7S2V427_9STRA1.340e-10074.13Catalase n=1 Tax=Fibrocapsa japonica TaxID=94617 R... [more]
A0A835YMK5_9STRA5.660e-10076.96Catalase n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6176contigH-paniculata_contig6176:177..11349 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score304.3
Seed ortholog evalue4.4e-80
Seed eggNOG ortholog10228.TriadP63434
KEGG rclassRC00034,RC00767,RC02141,RC02755
KEGG koko:K03781
KEGG ReactionR00009,R00602,R02670
KEGG Pathwayko00380,ko00630,ko01110,ko01130,ko01200,ko04011,ko04016,ko04068,ko04146,ko04211,ko04212,ko04213,ko05014,map00380,map00630,map01110,map01130,map01200,map04011,map04016,map04068,map04146,map04211,map04212,map04213,map05014
KEGG ModuleM00532
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide
EggNOG OGs38BMC@33154,3BFAV@33208,COG0753@1,KOG0047@2759
Ec32 ortholog descriptionCatalase
Ec32 orthologEc-07_001420.1
EC1.11.1.6
COG Functional cat.P
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons6
Model size633
Cds size633
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6176.13901.1prot_H-paniculata_contig6176.13901.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6176 177..11349 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930698.580534-CDS-H-paniculata_contig6176:176..3301622930698.580534-CDS-H-paniculata_contig6176:176..330Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 177..330 -
1691481411.630125-CDS-H-paniculata_contig6176:176..3301691481411.630125-CDS-H-paniculata_contig6176:176..330Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 177..330 -
1622930698.5938268-CDS-H-paniculata_contig6176:3697..38401622930698.5938268-CDS-H-paniculata_contig6176:3697..3840Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 3698..3840 -
1691481411.640661-CDS-H-paniculata_contig6176:3697..38401691481411.640661-CDS-H-paniculata_contig6176:3697..3840Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 3698..3840 -
1622930698.6092236-CDS-H-paniculata_contig6176:4017..41071622930698.6092236-CDS-H-paniculata_contig6176:4017..4107Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 4018..4107 -
1691481411.6487625-CDS-H-paniculata_contig6176:4017..41071691481411.6487625-CDS-H-paniculata_contig6176:4017..4107Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 4018..4107 -
1622930698.6354795-CDS-H-paniculata_contig6176:7124..72231622930698.6354795-CDS-H-paniculata_contig6176:7124..7223Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 7125..7223 -
1691481411.6566463-CDS-H-paniculata_contig6176:7124..72231691481411.6566463-CDS-H-paniculata_contig6176:7124..7223Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 7125..7223 -
1622930698.648125-CDS-H-paniculata_contig6176:8026..81101622930698.648125-CDS-H-paniculata_contig6176:8026..8110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 8027..8110 -
1691481411.66431-CDS-H-paniculata_contig6176:8026..81101691481411.66431-CDS-H-paniculata_contig6176:8026..8110Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 8027..8110 -
1622930698.659171-CDS-H-paniculata_contig6176:11286..113491622930698.659171-CDS-H-paniculata_contig6176:11286..11349Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 11287..11349 -
1691481411.6719365-CDS-H-paniculata_contig6176:11286..113491691481411.6719365-CDS-H-paniculata_contig6176:11286..11349Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6176 11287..11349 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6176.13901.1

>prot_H-paniculata_contig6176.13901.1 ID=prot_H-paniculata_contig6176.13901.1|Name=mRNA_H-paniculata_contig6176.13901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
MARDKATSQIEDYAKTQTTSATMTSSNGRPLESLTESMTAGSGGPITIQD
FTLIDHLAHFDRERIPERVVHAKGAGAFGYFEVTTPELRGICKAKMFSHV
GKRTPVAVRFSTVGGESGSADTARDPRGFAVKFYSEEGNWDMVGNNTPIF
FIRDPILFPSFIHTQKRNPQTHLKDPDMFWDFISLRPETTHQVRVGHEEK
GEALCFFWRG*
back to top

mRNA from alignment at H-paniculata_contig6176:177..11349-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6176.13901.1 ID=mRNA_H-paniculata_contig6176.13901.1|Name=mRNA_H-paniculata_contig6176.13901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11173bp|location=Sequence derived from alignment at H-paniculata_contig6176:177..11349- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCACGAGACAAGGCAACCTCGCAAATCGAAGACTATGCAAAGACCCA GACTACTTCCGCGGTAAGTGTGATAGCCCATGCTCGCCCCCCTGTGCTTT CGCTCTGTCTTCTTTTCTCAGTGGTGGTGCTACTCAGCACTGACAAATCA ACTGCAATGATAGTGTTCGATGCATGAATTTCTTTTGGTAAATAATACAC CGCACTCCTACTTGTACGTCAGTGCCTGCATGTCTGATGTACGGCCGTTC GCTCTGAACGGCGATGGTCCATTTGTAATTAGACGAGAGGTGTTATGTAC TGTGCGAAAAGCAAGTTTTAGTGTATGTTGCTTTGCGGAATGTGGGGGTA TTTCCCGCTGGCGATCTATGCTCTGCATAGTTTTCCACCTTGTTAGAACA TCATAGAGCTGACACATGTGGAGATTGTCAATCAGTTTCTTCATTAAATC GTCTTGTTGTACCTTACAGACAGCATCTCGTATAGGCTAATCTGAAGTCG TTACTGATATTTGTAGTGAATTGATCATGTGCTGGGGCACTGACTGCACT GTCACCACGACTGAAATTAACACTGCATGCCTGCATGTGGCGTGGCGCTG CTCTCTGATCGTGTCATAAACCCCGCATGTTGTTCTGCAAATGCTACCGT ATTCTAGCATTCTGAAGCATGTTGCATAAGCCATTTCATTCCACCGCCAC CTAACTGCCCTTGATATGGCACTCCCACTCAATGAATGATGAGCACTGCT GAGTGGTGCCGAGAGTAGGTGTAACTGCACGCCCCGCTCCCTCTCTGATG GGCCATACCTCAGTCCCCCATTCTACTTGGGAACCTCGCGGGTCATAAAT GCCACGGTTGTTGCGAAAAACCTCAAAACCTTCCCTGAGAGGTGTCTTGA AGCAGGGCCTCGAGCGGTTATGCCATGCTTCAAAGACCAGACCTGATCAA GCCTTGAAGACGCGTTAGTGCCCCATCAGTGAAACGGCTGAGGCTGGTGG CCATACCTGCCGTCAGCGCCGCCGAGTGGGTAGTTACTCCCAGACTCTTT GCAAGAGCAACGCTAAACAGCAGGCTCAATTTGGGATGCGGATCCTTATC AGAAGCATTTTGCAATCTGTAGAAGCTACATCACGGTGAGACCAAGTACT TGCTGTGACAAGGTATACAGAGAGGTTCGTCTTCGGGGCACTGCGGCAAT TTCACGACGGATGTAGCACGGATGATGGGACCCAAATTCGAGGGGAAATG GGGTGTTGGACCCTTATCACCGATATCGATGTATCTAGTTCTACACGGTT GGTACAGCGTCCTTTTTTGTTCATTATAAGTGTTCAAAACGGTCGGAATC GCCGAAGACCGAGTGTGGTATCAGCTACAACAGGCTCGAAAAGGCGTAGA GAAATGTACCGTTGGTGAGGAAGAGGTGGAAACAGGGGTGCACACCGCGT AAATGCAGAAACTGGAGGGAACAAACAGCTGACATCTTCTCCCAAAATCG TGTATGGTGTACTGTTGACTGTGTTACTGTAAGGTACCCACATGTGTCAA TCAGGCTCATTATACATTTTAGTTTGTGTGTCGTCTTTCGATCAAGTGCT GCTTTTGCGGAACGCAAACTGCATTACTCCTGTTTGAGTTAGTGATAATG ATAGCGCTGTCTGTACGGTTGGGAGAGCTCTCCATCTCAGCACTACACTG TTCTTCGTACCCTTGCGTTAAGGACACAGACCTCGGCTTTTGGGCATTGA GCTCAAAGGTCATGTACTTCAAACAATCATAACTTTTCTGCATGACGCTA CGTCGAAGAGCGAAGAGTGAGACCAGATCCAGCAAACGCGACCGCCACGT GGCACGGAATTATGCAGGAGTGGATGGAACATGCGCACCCGCACTATGGT CTAGCAGCTGTATGAAAGTGTGAGCTGAGGTCTCGACGAAGAGCGATTAT GGGTATTTGTCATGCCCCAGGGCGCGAGTGGCTCATCACAAAGTTGAAGA TAGTACAATATTTTATCCATATAATTACATTCTACTGCAGTTTTGCTATA GTGTGCTGCACTAACAAATTACAGCCGGTTGGAGACACTTTATTAAAAAA AGATGATCAAGAATGATACGTAACGAAGTTTAGATGCCCAACTGGCCAAG AGTTCACTTAAGGGGCGGGTATCGCAACTCAATGTGCTATTTGGGAGCAA TATGGGCGGGTAACGCGACAGTGAACACCAGCCAGCGAGATCAGCGGCGC CGCTGCCAAGCCAGCTTCCGCCCGGGAGCACTGCCGGAGTCCCGGCAGTA AAGAGACGCGTAATAGCTACTCTCGACAGCACCACACCCGCTAATCCCAG CGCCGTCGTCAAAGAGAGGCAAGGGCAGCTCCAGCACCTCGAGAGGATGA CGATAAACAAGATGCCTAGCTAGTGATGCGTCGCGACTGGTGGGGTCCAG ACTTACCACCAACTTGGAGCTTCACTGTCCTAATCACCCCTGTATGCATA CGCTCGCTGACCTCTTTTTTGCTCTTTCTCACGACGGCGTATCGATTCGC GCGCGTGGCGCTGCCGTAGTCAGCACCCTGTTACTCATTGCGAGACTGCC AGGAGTGCGGCAGTGATCATGGGTTCAGATTTTCTTGGCAGGAGCGCCGT GTGCTCGTGTGGGTGTACCCTTTGGGATGTTGTTTAGGCTCGTCGGTCGT GATCCCCAAAACCTATTGTTGTCAAGTGCGTGTACATTACATGTCCTCAC AACTCTTGTGGCCATGTTGTACGGTATCGCAGAGCCATTTTTTCCGTCTG TGTCCATGTTCACGTGTCATCACCCCACCAAAGCTTGGATGCCGATGGTC ACTCTTCCGGAAGACAAGTACCCTCGTCCTCTGGAGGACGAGTGGTGCGT GGTCCCACAGCTAAGGTGTACTGCGGATTTGTTTATTATACGTAATACTG ACAGGTTCAATGTATTGATGACAGGGGCTACACACGAGTCATGCAACAGT CGGGTCTGGCTCTACGGGGTGCAGTAAACATGATCTTGCGGCGTGCTGGT ACATGCGATCCCCACCCCAGTTCATGAAATAGCAGTCGGTTCCACATGTA AGGTGCTTTGTACAGAGAAAACAAATGACCAATGCGCACCGCACCGCTTA TTGGAAGTATGGAAGGTACGTGGACTTGCAACAGAGGTGAACCTGCTCTC TTTTTTCTGTTCCGTTTTTTATGTCCTTCTCGAACGCAGACCATGACGTC GAGTAACGGGCGTCCCCTCGAGTCGCTCACGGAGTCCATGACAGCGGGAT CTGGCGGGCCAATTACCATCCAGGTGTGGTATATCATGGTTATTTATCGC TGTCTTGCCTCCTTGACATATGGAGAATACGCCCCCCGGACGCTCCCGCG TTTTACTACCCCCTGTTTCCCTGCGGTACACAACCATAACCCAATGTTGC CATTCCGTGTAGTTATGAACCGAAGCGGTTGTTTGTATCTACGCTGCAGT CGGTAAAGGCTTGGACTCGGCGGAGATCACTTCATGTGACAAGTGTACTG TTGTGGTAGTAACGATAGGCTATGGTTAAGCCTCGAAAAACTTGTGTATC TAAAAGATTATGAAAAATGTGAGGTTTTGCGCTGTGCCGATGTCGAGTAT GTAAACTTGTGACATGAAAGGACAGGTACGTTATTGGACATGATACTGCT ACGGAGAACCCTTTGCCTGCCGCTGGACAAGATTTGATTGTAATACTCAG ACGTATTTGGCTTTGGCTCCTAGGAGTTGACCAATACATTGAAAACGATG TCAAAATATTGCAAATGTTATTGCTTAACTTCTGCAAACTAATTCCGTAG ACTTCGTCTTGGACTGTTTGTCATTCCTCCTCTCTATCTCCAATCGTTGG AGAGTGGAAGCGGCCTGAAAAGATTAGGACTGGCAGCGGCAGAAAATGGA ACATATTTCTAGCTACGAATGTCAACGTAGGAAGGAGTGATGAAGCACCG GAGATCCCTCGGATAGGGACAGAGCTTCATCCTCTTGAGTGTGCGTGATC AATGATGTTATGACTACCAGATACAGAATATGAGTACGTCTCGCCCCCCC TGTCTTGCGCTTCCTACGCATGGCAGGACTTCACGCTGATCGACCACCTG GCGCACTTTGATCGCGAGCGCATCCCAGAGCGCGTGGTGCACGCCAAGGG CGCTGGAGCCTTCGGTTATTTCGAGGTAAGCCGTGCGCTGTCGCGAACCC TGTAATCCCAACCCCTCCACGCCTGACGGAGGATTCCTACATGCCTCCCA ATGTTGGGTAACCTTGCAGTCGTTGGTGTCTAGGAATTTGTTGTGTGCGT GAATTGTTGAGTTCATACCTCGCACCTGGTAGAAGAGGAACACACCTGAA AGGAAGAAGCAAATTTTTCGGGAGCACAAACTCCTAATTACCTATTACAA AAGAGATCTCAGTCATGTTGACATATTCCGACTGGCACGATTATGGCAGA CTGCCTGCTTTGGTGCCTGAAGGTGCCGTTGGTCATGTCAGGAAGCCATA CGTACAGCGGGTATCGTTCTCTACGGAACTCTAGGGATACGGTGATGCCT GCCAGCGCCCCCCCCCCCTCTCTTCATTGTGTGCCGAAGATTTGGTGCTG CAGGCATAAATACCGTATCAAGCGCTGCTATACTGCATGGAGGACTGTCT GTTTTTTCGTCGCCGTGCGCAGCTCCACGGTATCATAATCTTTGCATTGC AGATATGTTGTCGACATACGGGTCTCACTCCACCCAAGCCGAAGCAATCG TGTCCATCGACATGTGGTACGCCCCACCCCCCCCCTTTTACGACACGGTA TTGTCAGATATCACGCGTCAAAATTCGTCGTAATGCAGGAATACGGGTAA AGCGATGGGCACATGCGCGCTGAAAGTACCTTGCATATGTTAATAACGTC AGAAACGTGTGCTGGTCTATGCGATAAATCGATGAAATATGTGAAATTCA TGGAAAACGGGAAAATTAATTGCGCACCCCTGTCTTGGTTTGTGAGCAAT ATTCATATGAACCGCACTTTGACATGAGCGAAGCATGCAAAAATAAATAC AAAGGTTGAAGAGTTGAGGCCCGATTAATATGGCCTCGTGGCATGATATG GGTCAGTCGACGCGGCGCCATATCGCTCCTGGATAAGTCCGCGAAGTAGT ATCAACTAGTCATGATATTAATTTAAGGTTCCCTAGTGAAGGTAAAATGA TGTGGAAATACGTTCTCGGGCTGTCCAAGGATTTGTATGAGCCCAGGTAC AAGAGGAAAAGAGAGACCTGCACTGTATATGCCGTTCGACGTCATAACCC CAAACCGCACCAAATGTCACGGGTTATGTCGCTCTTTATTAAAACACAAA GTCTAGGTTTCAATTATAACATGGTACCACACTACTGGGGGTCCTCTCCT TAACGTTGTTTGGATCTGGCACTCAGCTTTCGAGCTGCGCGGTACGGTAC GCCTTTTTGTTTTCGCCGTATCATACAGTATGGTATTCGGGATTTGGGTG CCCAAGGGAAAGATAAATCACGGTGGGTAGTTCGAAGGGAACACGCTACG TTGCTTAATAAAATCCCGAGTCATGATGAATATCTTGGTGAATTCACATG TTGGAGGAAAAAACTCGCTATGGATGTGAAGCAGACCTTCTATTTGAGCA TTTGCGATGTGACACAAGGTGGTGTGAAAGAAAAGCGTATCCTCATTCCC TTCAATCAATGACGCACTTCCAAGCGGGTAGTGCGCAGACTAGAGCATCC ACCTCAAATTCACTTGTCCTGAAGGCCGTAACCAATTGCGCCTTCTCCTA TATTCTCTTTTAAGCGTGAAGACACGTACTTCTCTTGACTGTGCTGGATA ATGCTGGTGACTCTCCCGGGTTAGCAAAATCCCGGTGCTCGTGTCCAATG AGGCAAGGCCTGCATTGTGTCCACCGTTTCTATTCACCCGCGGCGAGTTG TACATGAGGACTGCCCGTCACTTGGAATTTCCCTGACACGCTGAGATTGA CCAAGGTTTTTGCGTCGTAAAGCACCCGGTGCCCACACCCCGGCTAGGTG GTTGTGTCGACGGCATGCGCAACCAACGCATTCAATATCCCCCGGCTGGT CGATCCGCAAGGATAGTCCTCAAACTACGGCAACCTCACTCGCTGATATC GAGTTGCTTCCCGGGGTAGGGCACCCCGCGTCAACATCCTTCATGTTGAG GTGTGAATGACATGTGTAAGAAGCTGTACACATCTAATGAACGCTACATA CCAAGGAGGGGTGCCTATTTCGGATAGTATCATTTCTATCGAAGAGCGTA GTTCAACCTGAGCGAGTAAAGTTCGTTCCCACCACCCGAGGGTGAGCATA ATGATCAAACCCGTGCGCATATCGTTGACGCCATCACCCACGAGGGGTGT CAGCACTGGCTGCCCCACAAAGGAAAATATTTTGGATCTCAGCGACTGGG GGCAAAATCAAGTGGCAGGCTATCACCGTAATTCTGATCAGCAGAGGGTG ACCTAAGGCCCGAAAATGACTTGAGTATCGGCCCCATAATCCGAGCAAAT AGGGTTGGTTGGCTTGCAGCGAGAAAAATGATATGCGCTGTGGTTAGCGG TATCCTCTAGTACAAGCAAGGAAGGTACGCCACTTGACAAGCCAGGGTAA TAGGGGCACATGGCGATGATTTCGAGGAGGGACAAATGTTCCTCAGGTAG TGCAATATGACCATGGATAGAAGACGAAGCATTGATATTGGACAGTATAT GGCCCATGCGCTCGTGTTGGATCTGCTGGTCTTGTGGCCCAGATTCCTGA GCATACGTGGATATGTAGACATTAAGCTCGTTCGTTTCCCCATACATGTC AAGGATCTGAACTGAGAGAGGGATGAGCCACTTGCAATATGTGTCAAGGA TTCAGCTGATAAGAATCAACCGTGCAATGTACGTATTAACAATCCAGCGC CTACCTGTTGCCCATGGACGATAACGTCTGTAGTTGCACAGGCTAAAGCG GATCCAATCCGTAGGATACCGATCATTTACGCAGAAATATGTGTGAATCG TGCGGAGGTCGGGCATATCGTTTTTTGGGATGCATCCAGACGCGGGATTG GAACACCATGTACTGGTTGCTACAGGTCGTTCGTGATACGGATCCGCTCA AGCTGTGAACGCTTAGTATTTGTGGATCGTTTTCTATTTCAGGTCACAAC GCCGGAGCTTAGGGGAATCTGCAAGGCCAAGATGTTCAGCCACGTCGGCA AGCGGACTCCCGTGGCCGTCCGCTTTTCAACGGTGAGCTCCCCATGTTGA ACTGCGTGGATCGCTTTTGGGAGAAAATCATCTTCTTTATGACGAAGCAG TTTTTTTTTGTCACGAACCGGATACGTAGTGTGGGGACCCAATAATTTGA GCAAAAAGGAGTCGCATTCGCACAAATAATTAATCGCTAAAACAAACCGA CCACGTCAGGTTGGTGGAGAAAGCGGCTCCGCTGACACCGCGCGCGACCC ACGTGGCTTCGCCGTGAAGTTCTACTCGGAAGAGGGAAATTGGGACATGG TGGGCAACAACACGCCCATCTTTTTCATCCGCGACCCCATCCTCTTCCCC AGGTATCGTGTACAAACCGTCACCTCTTGCTCGTTATTTTCTGAAGCAGA TGCTGGGCACTGGATATGACCACGCTGACGAGAATATAGGTGACATCGTG TTCGAGGGTCGACATCAGTGAACAAAACTGGCATCCGGCCGTAGTCTTCT CGGCCACTGACAGAGGCCTCGAGGAAAGAGATGCTGACTGGCAGAAGAAA CGGAAGTACCATGCTCCTGTAGTAATTTTTTCTTCATTTATGACTCCTGA GGCTCTTCAAAAACCTAGATTTTATCCAACCTCTCTGTTGATCACAACGG AAGAGGGAGTAGTGCCACACAAGGCTATCTGAATCATTCTTGTAGTATCA GGTTTGCGCAAAGGCGTTTTTATGGATATTGGTATATCACATGAAATGCC CTCATCACACCTTCCAACCCGCAATTACTCGCAGTACACACTGAAGGAAA ACTCTGCAATTCTGCACTTCGTACCTCTGCACTGAAAATAGTCGAACATA GTAACCCCTATTCCAGTCTGATGACCCTTGTGTCAAGTTTGTTTCTTCTT TGACGTGGTCCGCTCGTACGACCCGAGCGCTCAGGTATCTCCTATCACGT ACGGTGTGATCGAGGACGGGGTATTGGCGTAGATTACCGAACGTTTGGAT CGGATGAGACGGAATCACCCTCCGTTATTCATTGTGCAACCCGACCTTGA CGGCATAGTTGAGGTCAAGGCTAGTCCGTTTACGGGGGATCGTGATGATG ACTATAAAGGGAGGTATGCGTGGCATCCCGCACCCATTTTCAGTGTCAGG TAACGTTACAGGGAAACCGTCCACAATTGTTATTTTCGACGTGCAAGCCG TTCCTGAAGGTCATAACATGGTTGATATCTGTCCTTCTGATACTATTAAC ATGAAGGAGTACTGCACTATCACCCCTCCACGGCCCACTCGGGGTATGAT AGAAGACGAGGACCCAACTAGTCGAGGTGCATCACCAGCTGGACCTCGCA AGTTGCCGTTCTCTCCCACCCACGCATCTGTAGTTGCAGCTGGCACAGCG TAATTCTCGCGGCGACGTTTGGACTGGCGCGCTTGGCGCTTCTGTTTGCA GCGGTATCTACCGGTTCCGTTGGTGAGACTGTTGTAGTGCTGGTGCGTGT TCGTCTTAGCGGCGGTCCCGTCGAGAATCGACCGCACCGCCGATAATTCT TGCAGCAACACAGCAACACTTCCGCCAACCGCACTCCGTGTTATCGCCAA ACACAACAGCGCCGTGCGCGCCCGTCCAAGCGTCGCCAAGAGAAAGGAGC CGTGGCATTTGCAGCTACAGATGCGCGGGTGGTAGATACAGTAGCTGATG AGACCCACCTGGTGATACGTCTCGACTCATTGGGTTCGTATCTAGTACTT TTTGCGATCGGAGAACGCAGGGCAATCTGACTGTAGAACAACGCTAATTG TACGGCAATGGGGTTGTTGTCTCACCTTATACTGATGTATAACCGGCTAC TGACGGCATGTCGTTGTCGAGCCGCATAATGTGTACGAGCGCGAGTTTTA GACCCCGAATCATGGCGGGAAAAAAAAACTACAAGCCGAGTTTTTACTCA ATCCTAGCTCGATTGTACGTGTGACACTGTCGAGAAATTGCAGGTGGTGT ACGCGTTAACCCGCCTTAATTTCAGGGAGTGATCAAACGTGCAGGATAAG GAGAAAATGCATCCCTATGGCACCCGAGATTGAAAAAGAGAGCGGCCGCG TCCGACCTCTTAATGTTCGACCATGACACGGGATTGTACACGGGTAACAC AGTATCGAAAACATGTCGACTCCCACACGTTACTCGAGGTGTTTGAGGGA AAAGGATCCTTGGTCTCTCCGAGCGGTCGAGGGGTTTGAGCAAAATACGC ACGTTTGTTCATTTCAGATTTTGGCCGCTGTGTTCCTTGGAACGACCCAT ATGGTAGGTGTGTTTTATGGGCGCAACAGACGCGTAGTATCGACTGCGAG GACGAAAGCGATGCCAACACATATCATGCCCGCGTACCCCGCCATCGTGG CTGCGACCAATCCTTTTAACAATGATATGGACACATTCGCGAGACTTTTT TTTTCTTCATGTTACTGTCTGCGCTGTGCGGGTGTCGTAAAAGAGCCATA AAAGCCATAGCTGTGGTGTGATCAAATATCCTGGTGTGCGGCTGTGCGGT GCACACACCTATAAAGTCCACCAGTCATGATGATATTTGTACTCGCGTGT CAATCATGTACTGCTCTCATGGAACTCAAACCATGCATACCCCTATCGGT GTGTCAGCAACATTAGTTACAGGATCATCTGTACTGTCTGTAGAGCTCCC TATCCCCGGAATTATGTCGTGGGCATTTGTCACAAGAATTCCGGGGCGGT TCTGTTATTTTGTTTTTGGAAGGGATTGTGCCGGAATTTTACTCGGCCGG GTGCTTGAGGATTAAACTGTGTTTCCCGATTTTCGTGTCTTGATGTATTT TTATTGCATCGCCCCTATTCTGAGTCTGCTATCCCTAGTCCCAGGGTATG ATTCCTGCGTGTGACCCACTTACTGTTCCAGTTCACATGTCTCCTGTCAC CTACCGTGGTTCCAAGGATCTCGAATAGCCGGAGACTATAAAAAAATTCA GTCAAGATGAAATTATTACGTTCACCCCTCTCTTGTGTTCAACCGGACCT TGATACGATCGATGGTTCGTCGTTCGGGACAGAATTCTCTATCCCTGACT CTGGTGGCCCATACTTCCGAGTCAAGGAGTCAAGTTTGGATCGTTTACAG TGGAGCGTGATGGTGGCCGTGAGAGGAGGGTAGGCATGATATCCCGACGA ATTTTCAATATCACCGATGGTTATACGTGTAACTGGCACCATCGGCAGTA CGAAGTCCTGTTTGTGTTTCGGGCTTCGAAAAAATTTGGCTTCAATAGAA TGCGGCACGGGTGTTTTTAGCCTGTCGACTACGGTAAATTCGAATGTAGT CCACCGCGGGCATCATATGGTACTTCCTAGAGTCTACGAGACGTGGTGTA ATTGTGGCGTGTTTTGGCAAATGCCCTACATCTCACAATCCTACTATTTA TTTTTGTCAGTTCCTTTTCCCCCACAGGAGCTTTCCACCAGTATCCGTTT CAGTGATCTGAGAAGCGCAGGTATATTGTAGCAGTCGACCCCAACCCCCC CTTGCCGTCGATAGTGCTTTGTGAATAATCCCCGAGTAGTTGTCTTGGCC CCAGCGTGATTTGTAGAATGTCTCATGTCGTCTCGTGCCGTGTTGGAGAC GCGACGATTGTCCGTGGCTCTTACCCTCGAACGTGATGTGCCCGCTTCGT GCGCGTTTGGTCGTTACAGCTTTATCCACACTCAAAAAAGGAACCCGCAA ACGCATCTCAAGGATCCGGACATGTTCTGGGACTTCATCTCCCTGCGTCC TGAGACCACACACCAGGTGAGAGTTGGTCACGAGGAGAAAGGAGAGGCAC TATGTTTTTTTTGGCGGGGGTAG
back to top

Coding sequence (CDS) from alignment at H-paniculata_contig6176:177..11349-

>mRNA_H-paniculata_contig6176.13901.1 ID=mRNA_H-paniculata_contig6176.13901.1|Name=mRNA_H-paniculata_contig6176.13901.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1266bp|location=Sequence derived from alignment at H-paniculata_contig6176:177..11349- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCACGAGACAAGGCAACCTCGCAAATCGAAGACTATGCAAAGACCCA
GACTACTTCCGCGATGGCACGAGACAAGGCAACCTCGCAAATCGAAGACT
ATGCAAAGACCCAGACTACTTCCGCGACCATGACGTCGAGTAACGGGCGT
CCCCTCGAGTCGCTCACGGAGTCCATGACAGCGGGATCTGGCGGGCCAAT
TACCATCCAGACCATGACGTCGAGTAACGGGCGTCCCCTCGAGTCGCTCA
CGGAGTCCATGACAGCGGGATCTGGCGGGCCAATTACCATCCAGGACTTC
ACGCTGATCGACCACCTGGCGCACTTTGATCGCGAGCGCATCCCAGAGCG
CGTGGTGCACGCCAAGGGCGCTGGAGCCTTCGGTTATTTCGAGGACTTCA
CGCTGATCGACCACCTGGCGCACTTTGATCGCGAGCGCATCCCAGAGCGC
GTGGTGCACGCCAAGGGCGCTGGAGCCTTCGGTTATTTCGAGGTCACAAC
GCCGGAGCTTAGGGGAATCTGCAAGGCCAAGATGTTCAGCCACGTCGGCA
AGCGGACTCCCGTGGCCGTCCGCTTTTCAACGGTCACAACGCCGGAGCTT
AGGGGAATCTGCAAGGCCAAGATGTTCAGCCACGTCGGCAAGCGGACTCC
CGTGGCCGTCCGCTTTTCAACGGTTGGTGGAGAAAGCGGCTCCGCTGACA
CCGCGCGCGACCCACGTGGCTTCGCCGTGAAGTTCTACTCGGAAGAGGGA
AATTGGGACATGGTGGGCAACAACACGCCCATCTTTTTCATCCGCGACCC
CATCCTCTTCCCCAGGTTGGTGGAGAAAGCGGCTCCGCTGACACCGCGCG
CGACCCACGTGGCTTCGCCGTGAAGTTCTACTCGGAAGAGGGAAATTGGG
ACATGGTGGGCAACAACACGCCCATCTTTTTCATCCGCGACCCCATCCTC
TTCCCCAGCTTTATCCACACTCAAAAAAGGAACCCGCAAACGCATCTCAA
GGATCCGGACATGTTCTGGGACTTCATCTCCCTGCGTCCTGAGACCACAC
ACCAGGTGAGAGTTGGTCACGAGGAGAAAGGAGAGGCACTATGTTTTTTT
TGGCGGGGGTAGCTTTATCCACACTCAAAAAAGGAACCCGCAAACGCATC
TCAAGGATCCGGACATGTTCTGGGACTTCATCTCCCTGCGTCCTGAGACC
ACACACCAGGTGAGAGTTGGTCACGAGGAGAAAGGAGAGGCACTATGTTT
TTTTTGGCGGGGGTAG
back to top