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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Model size | 222 |
| Cds size | 171 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6174.13899.1 >prot_H-paniculata_contig6174.13899.1 ID=prot_H-paniculata_contig6174.13899.1|Name=mRNA_H-paniculata_contig6174.13899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=57bp
MNGPGGGQFLEDIVSTCEVNIVDLARLVYPATLFQCSVCLTIQVGRCDLV
KFPDRR* back to topmRNA from alignment at H-paniculata_contig6174:2664..11147- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6174.13899.1 ID=mRNA_H-paniculata_contig6174.13899.1|Name=mRNA_H-paniculata_contig6174.13899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8484bp|location=Sequence derived from alignment at H-paniculata_contig6174:2664..11147- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AAAAGGCAGACCTTCAAACTCGAGGATGAATGGCCCAGGTAGGTGGAGGT
GATAAACACGTAAAAAACACGATGATCTGCTGCTTGATTTGGATACGTTA
GTGGCAATAGCCGCTTGTTCGTCTACAATAATTGTAGATCTCTACTTAGC
TACCATATATGCTGTAGCTAGGTGATGAGTTAGGTGATGAGTTTATTGCT
CACGGAACACGAAAGAGAAGAAATAGCATCAAACACCAAATACCGACCAG
AACCAATTCGTTTCACTCTTTTGCCGCGAACAAAACACAGGCCTCTAGAT
CTCGTTTCAAACGATCAGACAATTTTCTATTTATATCATTGTTGGTTACG
AACGTGGAACTCGTAACTGCGCTGGCAGAGCCAACCACAGTGTCCTGGAT
GCAGGTGCGAAGCTGCCAGCAACTACTCTGCGACATTATTTATCATTTCC
GCTCCCTTTTGTATTCATCTACTTCCCGCTTGGATTAGGTGTTTATTGTG
GAGTTCTGGGCGTAAGGTAGATTTAGTGCTCACATCTAGTGCATTCTATG
CTCTTCTCTGGCAGCGCACAATGCAGTTCAGTTAGAGCGTCTTCTAGAGC
CCACGTCTGGAATAGTAACGAGGCCGTGTCTTACACAATTAAATGTGGAA
TGAACAATGAGTGAATGAATGAGTTTCCAGAGACAAGAGGCGCACTTTTG
ATTGGCCCAAGCACTCGCTCTGTCAGGCAGAAACCAACAGACAAATTGCC
ACAAATAAATAGTCAAGAGACGGTCATTTCTAAAACCCAACTTTGCAACA
AGTGCCGCAACTCCTCAAATACTGAAGCGGTGGTTTTGACAAAAAGATAG
CAAGCCAGTTTCAAAAGTGTGTGATTTTCTGAAGTTCCTCCGATTGTAAC
CTACATAGCTCGACAACGGCAACAACGAGTCAAGCCTGCCAAATTTTTCC
GGAAAGCGCTGATCACGGTTAAATTTATCTGAGGGACCTACTCCCAGTTC
TGACAATATCGGGAGCTAGGCGCACAAATGATAGATCAGAAAAACAAATG
TGACGACTGTCTGCACTGGTAGGGCATCAGAGTACAAGACAGCAACTACA
ATGGCTTCGCGGTTGGCAGTTTTTCGAAGTTACTCTATTTGTGGTACCAT
AAAAAATCAATAGGTATATTGACAACCATAGTGGCGCCTCGACCTTGCCG
ATCAAAATTAATCTCTCGGGGACCTAGAAAGTTTCGCTCAAAACAACAAA
AAGAAGGCGCAAAATATGACAGAAAACTAATCGGTGCCGCCGTGTCTATG
TCACTACATGATGTCTATTCATGACCGTGGCATGGTTTGGTTGTGAAACG
AGTGCCTATGCTTTCATTTCGCACAGCAGCACCTAACCGATTCGGGACAG
ACGAAATTTATTTCCGGGGTGGTGACATCACAGCACTACACTGCCACTAG
ATGAACATATCCATGAAACATTATACGATAACTGTAGCACGAAATGAGTA
GAACTCAGAGATTCCAGAAATGAAGCGGTGTCGCAGTAACCTCTCTCATT
TCAACCATTGCACGTTAATGATGTGGACAATGGTTCTATTGAGCGGTCGT
GGCAGCCAGGTTTACAGCCCAAGCAGTAGTATGATATAGTCTGTAGAATT
GGGCGTCTTGTCCCCCTTAAAGACCATCGTTTTTGCTGTTTGTTGTCGTC
ACGCACGAGCGCATTTCTTTCAATTCTTGACAAGCACATGGTACGTGGTC
AAATAAGAATTACCTCTCGAACTATCCAGTATCGTTTGAGAGGAGGTGTA
GCTTCTGTGGTCAACATTCGAACTAGTTCGAGTTGGAGGTGGTGTTGTTT
TTTCCGTTAGTCATCGTCATTCCTATCCCTACTAGCTCGTTATTCATTTT
TTTATATTACGTTTTCTTTCCGACTCTTTGACCTAGATGACAACTAAAAC
GAGAATAGATTCGTTTCTGTTTCTTCTTTTTTATGAGGCTGTCTCATCTA
GGAACGCAAAACGAATTTTTCGTCTTCAAGAAAAAAGCTGCCGCTTCTTC
CTGTTTGTTCGTGTTTGACTTGCCTTGCCCACAGTTCGGGTCTCGTTCAC
ATCTGCGCTGATTACACCTCAGTTGATCAAGAGCTTCTCACCATAACGTC
CTAACATGTTATGTAAACAATGCCAACCTTACCACAGTGTTGACATTGCA
ATATACGAAACAAGGTACCCTCTGGCCACCTGTGAAGGTGACGTGCATGT
CCTACCTTCCCTTTATAATCGTACAATTCATACTTGAAACCGTCACTCGT
GATGATACAACATGTTTAGCCATCCTCCTGCTGGCTAATGACCCAAAGAC
GTTTGTTTATATACCTTTAGACACCACAATTCCCAGTTTGACCGACCCTA
CGGACTCACTGGTGGGCTCTTGGGTATATTTATATTACTATGATTGCCTC
TTAACAGTTGCAGACTCATAACTGGGTGTTGGGAATCTTCAAAAGTAAGC
TCACAAAGTGAGAAAAATGAACGGCCGACGAAACGAGAAAAATTCGTACC
TAATAATAACCACGCGTTGTACTCGAATACCTGATCTACAGAGAAGCCTC
TTGAGCGAAAACTGTTGTCCCTCACTTGAGCACTAGAAATATGTACCTTA
CTATTACCAGTTCAAAACATGCCGTACAGTGAAATCTCTTCGCTATCTAG
CTGAATAACATACGTGAAATCGAAAAATGGTAAAAGGCCGTGATGGAACA
CTATGGCGTCGCTAAACTTCATCCCCATGCTCAAGAATTGAGGGGCCCTT
CTGCTGCTTCTTGCCTTTCTCGCAGAGCCAGTCTGTATCTCTGCACCCAT
CTCGAGATGGCTACCTGTGTAGTCACCGAAATGACTTGTTTCATCCGCTC
CAGCAGTACTCCTGTCTGCGAAACCTCGCCGCCCTCCTGTTCCCCCACCA
CGCTGGACGCCATCTGCTCAAGCAGCCCCTCTCCGCACTTTCCCAGACGC
CCAAAGCTTTTCACCGCGAGGGGGTTAAGTTTGAAACAATGCTCGTCGAA
GGACAGGTGTCCTCTTCGAGCGTAGTGCGCGCTTTTGCGCGCCTCGAAAA
TGGCGGCGGCCGAGCCGTCGATGGTAGCGCTCCCGCGCTCGAGGTGTCCT
GCCGACTGGGGATCTGCGTACGTGAGGTCGACCAGGTGGTGACCCATGAC
GCGGTAGGCGTTGATGGGAGCATCTCGGAGCTCTCCTGCCGGGACGACAA
GGCTCATTCGGTAGTCCCGGTCCGCCGTAAACGAATCTCCGTCCTCCACC
GTGCTCCTGATGCCTAGTCGCTTAAGGAGTCGTGTGACCGCGTGTAGGAG
CGGCTGGTGTTGGTCTACCTGCGGCCCCGCTTGATGACAAATTCGGGCGT
GGCGCGTGGTTACGTCCTCCGCTCCGCAGCATGGGCGTCGAGCGGCTGGG
TAAGGCTCAATGCCAAGGAACCTCCGCTCCATGAGCACGTACTCTGCTGG
AGGTACGGTCCTGGCGTTGTCGTAGGGCTATGCCCGCTGCACCGCCAGGG
CTCCAGTCCCCGACATGCTGCGGAATTTCGCTTTAGCCGCGTCGGCCGGC
TCGATCCCTCTGAACGAGTTATATGGGCCAGGTGGCCTACCGGCCGGGGG
TAGGTTGTCAAGCAGCGAGAGCAAGGTCGTTATCTCGGCCTTGTGAACCA
AATCACCGAGCTCTCGTTGCAGCCGACGGGAGTTCCTCCCTGGCGCGTCG
TGCCCTCTTAGAACATCGATGTTCGGTGTAGGCAGCGATACGTCTTCGCT
CCGTCCTCCGTGTTTCCACGGGACTAGCCCGGGCGGCAGCACCGCAGCTT
GTTGTTCGGCGCTAACTTCTCCCTGTTCTGCCAAAACGCGGAGAGTCGCC
CCCAATGAGCGCACCATCGGTGTCCGGAGAGGGTATGCCGACATCCGCTT
CCTCAATGGTCTTGGCGAGTCCGCGATCATCTACGGCAGCATGCCGCACA
TACTCTTCACCGTTGTTGACCAGCGCCTGTTCCATGCCGAGGTGAGTCCC
AACCCCCCTGAACCGGTCGACATGGCGGCCTGGAGTCGGTGGTGGGGCAG
GAGGTTGAGGCTATTCGCGTCGAAGAAGGCGTGTTCTTCTGCTGGTTGGG
AGTATTCCAGGATGTTCTCCACCTCTTGGGTATGTTCTGAACGAGCGCCG
TGTTCTTCCGATTTCGAATTTGTGCTTGGGAGTTTGTATACCCGATACAA
TTTCATTCGGAAATTATTTCCATATCCAATAGTTTTGGTGGTATACAACC
TCTCGAACATATCAGAAAATAGAAAATCAGACTCGCTCGGTTTAGAACGG
TCCCCAGATCTAATAGCTTTTGGCATCACACTATCACATTTGGCGTTCGA
CGACGGATGCGAACGACTCTCTTCTACGGTTTTGTCGTTTAGAGAGCATG
TCGTGTCCACACAGGACGGGAAGCAGCCCCAAGAAAAACGATCTTTGGCG
GACAGCGTCCACCACGTGATACATGTAACTCATACATGCACACACACACC
AGAACGTGTCGTACTGAGTTAGCCTGGGTGGATGGATTTTTTTCATTTTG
TTTATCTTCGAACGCTGATGATTGGATCGGGCCGTCTTATTCAACTGCCA
AAGATGGCGAAAGCATGCTATAGTCGTTGAATGTACCCTGAATTTTACAT
TGGACCAGAGATTTTAAACGGAGATTAGTTGTTGCGAAATATACGTGGAT
CTTCGGGCACAACACTTCCGATACTTCACCAAACGATTCTACCGAACCGG
TATTTCAGGTCTTCATTACTTTCACTGCGATGAGGTCAAAATTCTTTGGT
CTCTCCGCTGTTGCTGTCTGTGTATGTGACTTTTGGGTTGTTTTCCGTCA
ACCACACAATGAAAATAATTACTTAATGAGACAGCGGTAACAAACAACCA
CCAACCATTTGGGAGACACTAATATTTTTCCACTTGGCTGAAGAATCATG
GACTATTTTGCTTGCAAATCATTTACCCTAATCTTACAGACGAAAACGCA
TCTTCCCCTCACATAGCACAGTAGTTCTACAGATCGGGCAAATCTGGCAA
TACCTAACTTGGTGGGTGGCCCTCCACGGCGGGACAGGCTAACCAACTTT
TACTCCGTAGCGCCAGCATGATCTACTCGTTCTTGATCCAATTGATGCCT
GCTAACGCGCGTGACATGAATTTTGCGCCCTCTCCCCCGACCCGAACGTT
CTGTAGGAACACTAGGTATTTCCCTTGACCGGCTCTCTGAATCTGTATTC
GGGAGGCACCTTATGATCCCAGTTGGGTAACGCTACCGATTCTATCTGAG
TGTAGAGCGAAATCGAGAGGTTCCACGCCTGGGCTACAGATGGTTTTTCA
AAGGGTGCGCGTGGCTTCTGCTCTGGTGATTACCTTTCAACCAGCAGCGC
TCTGCTCCGTGTCTATACGAGTGGCGCGTGTGAATCTAGGCCCGGGTGGA
CCTCGAGTAGTTCAAGTAGTAGCTCTAGCGCCCCTTTACCAACCCCTTTT
CCCCCATGTGTTCGAGTGACTACTGGACCTACTCTTTTGTTGTCCGTCTT
GGAGGTTCTGAAGCACACTTCTACTCTGTTCGTTGAGTATTTTTCAGCCA
ACGAAATCTGGTATGGGTCCCACGCGACTCTGCTCGTTTCCCCGACCATA
GACTCATCTCCTGCATACAGAACATCCAAAGATAAGGCGCTCCTTACTTT
AGGTTTTATTCTCGACCCTGACGCGGGCTCTCTCGATTCCCTGGCTTATG
ACTGTGCGCTGTCGGGATATCCCACTCTGCACACATGTTGTGGAAATATG
TTTTCGCTGCTAGGTACCGTTTTGCTGTCTGGCTTTGGTTTTTGTGTATG
AACCACCGCAGGGACATCATTCCCGCCAGGATTTTACCAGCGGTATCGAT
TCCATCTTTCTCTTGCTACCAGGTTTTTTGTTTCGCAGCCGTCTTGCCTG
TGCTGTGTCTGATCGACCCCGTGACTAACGACTCCACCAGTAGCACGACT
TGCGTATCGTCTCTTTCTTAGCGTCATTATTTTCCTGCGGTGCGAGGCAG
GTCGGACAATATGTTCCGGCTGTGTATTGGCCATTAGAGACCACGAATCG
TCGTCTATTCTCGTGGTAGGCAGCTTGGGTCGCAGTGCGAGTGTGAGAAT
CTGTCAAACTCGGTGATCTATATCGTCAAGTGTCCATTTTTGATATCCGA
GCGACATTCTGCTGAACCTGACCTTCTAGCCCGCGTGAGATTCCATCAAC
TGGGCTGTTTTTCTTACCCGCTTCATGTTTGCGGTCGGGCACCACCCAAT
TTTAATTCTCATCCCCTAATTAGCATTATCATGGCCAGACAGGCACGCTG
ATCACCAGCACTTTCATGTCGTTTCACGAAAGATAGTGCAGAGACGTCGC
CGCTTCTGCTTGGAAAATGAATCGCCACCCTCTTTAGGTCTGGCTCCTTT
AAACATGTATAACGCCCAGGCGGTCATAAACATGCCTTACAGCTCCAGTA
GGTTGATCGTACCGCGGCACTCGGGAACTCTCTGGTTCTAACAGGTTATA
TTCTATACCCCTCTTCCAGAACCTGATGTCTCCATGAAATTCCGATCTAG
CGGCACGGTTTTTCGTAACCTACCCTTAAATTTGACGAACTCGTGTAATT
CTGTTATACCAAGGAGCTGTCAAATAAAATAATGCTCCGCGCTGAGAACA
AATGTGAGATTCCAATAGTATACTGGCTAACCTAAGAACATTATTGGCGC
TCGCTTGCTTCTTATCGCCATTCCATTTGTTAGTCAAAAGGTCTTCGATT
GCTTCAATTTTCTCTTCCATAATTGATCTTCTGATGATGTGCATGTTCAT
AGTGTACCCTGATGCTTCTAGAACTGTCTCCCAGTCAGTACTATATAGCC
AGGATGGGCGTCTCGTCTTTTCGTTCCGGACGGAACAATCGTAATGGTCG
GAAGATAGGTAGGCAAAGGGTGCCAATGCAGTGTGGTCAATCGGGTGTTG
TCGTACTCTAAAAAACGTACACAAACACAAACGCGAAAAAGATGTCTTCT
GCGTCTCCCCAGTCAAACATGGCAACGCCTACTTATTTTTTAGGGGGAGG
GTTGGCGAGGTGTGGGGTGACGTGAAGTGAACGATAGAAATATTTTGGAT
TTATTGTACAATGTGTTGTGATGGTCCTGAAAATACCTGCTTATTTTCCC
TTAAAATCTGTTCTTTTACTTTGAAAAACTTTTTCAAGTTCAAGTAAAAG
TACAATTACACTACACTAGACTAGTGTAGGTGTAGCTTTGGCGTCCAGAG
TTGAAATAACGTGGAATGAGGCGAAGGAAAGTGAAATAGTAGTGGATTTA
TTTCGATGGTGGTGTCGAGCTATTTATGAAGAAATATTAACCATTTAATT
ACAAATAGAAATGATGCACCTCTGATTGTCGACAGGGTTAAGATATCGGA
TGTTCGCCGACTCCGGTATCTTTGCAATTTCCCCGATTTCTCAAGGTTCT
ATGATTTGTAAGTGATTCATCCTTTTGCGTCCTTTTGGTAGTATTGTGGG
GATCTAACTGGACGTGTGACAGTGCGAGTGTTCGACCGCTTGTCACGCAA
TTCCCCAACTACCTGGGGAGGCTGCCTAACCAAAAAAAGGTCTCATATCG
GTTGCGAAATGTCTTCAACGCAGCGGCAGTTTTGAAGGTGTTCCGGTGCT
ATCCAAAAGGTCCTGGACGCGTTGGTGACATCTTCCTTTTAGATAAGGAT
TATTTTCGTGACGAATTGTACCCTCAGAAACTTTATTCGGTCGAGGAATT
TTGGTAGGGCGCCCCGGCACAAACATCTCGATACTTCTTCTGCGATTGTG
TCTCGGATGAGATTTTCCTTGGTTTTGCCGCGGGAGTCAAGGTCAAAGGA
GGAGTCATCGATCATTTCGGCGCAACTCTGATTCCTGCGATGTCTCTGGC
TGACACGGTTTCGAGCACTAAGCATTGATGGTTCCCCCGCGCAAGGGGCA
TATGATCTTCGATTGACTTATGATTCTTTTTTCAAGTGCTTTTTCGAGAT
TGCACGTAGACTCCTTGGTAGTAACTGAGATTCCATGGGTGAGGATGTTC
GTGAGGTCTACCATCCTCGGGAACCGTTTCATATCTCCATAGTGATGTTG
CACTTCGCACAGGCATATCGACGATGACACGAAGGTGCCACCAAGTACGT
TCGCGACCTGTGCTAGATTCTCATTTTTGAGGCGTGTGATCTCTCTACAG
GTGGAGGCCAGTTTCTTGAAGATATCGTTTCTACGTGTGAGGTCAATATT
GTGGACTTAGCTCGGCTCGTATACCCAGCAACTCTCTTTCAATGTAGCGT
GTGTTTGACAATTCAAGTTGGTCGATGTGACTTGGTAAAGTTTCCGGATA
GAAGGTGACTCCATTACCGATCCGTGATTTTGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig6174:2664..11147- >mRNA_H-paniculata_contig6174.13899.1 ID=mRNA_H-paniculata_contig6174.13899.1|Name=mRNA_H-paniculata_contig6174.13899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=342bp|location=Sequence derived from alignment at H-paniculata_contig6174:2664..11147- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAATGGCCCAGATGAATGGCCCAGGTGGAGGCCAGTTTCTTGAAGATA
TCGTTTCTACGTGTGAGGTCAATATTGTGGACTTAGCTCGGCTCGTATAC
CCAGCAACTCTCTTTCAATGTAGCGTGTGTTTGACAATTCAAGTTGGTCG
ATGTGACTTGGTAAAGTTTCCGGATAGAAGGTGAGTGGAGGCCAGTTTCT
TGAAGATATCGTTTCTACGTGTGAGGTCAATATTGTGGACTTAGCTCGGC
TCGTATACCCAGCAACTCTCTTTCAATGTAGCGTGTGTTTGACAATTCAA
GTTGGTCGATGTGACTTGGTAAAGTTTCCGGATAGAAGGTGA back to top
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