mRNA_H-paniculata_contig6173.13896.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Match: D8LKM8_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKM8_ECTSI) HSP 1 Score: 259 bits (661), Expect = 7.360e-72 Identity = 127/206 (61.65%), Postives = 147/206 (71.36%), Query Frame = 3
Query: 906 QPREVHYQCVACGKSYSAMVAGNPLWALVKQQCPVCHKMQIPRVDILNPTNNIEGHVSLLTEACAEYGTNGDDSCADWDGETSEDNSDGDCSGDEQGGTAASAMSNLVGEPRGGGSSNSLPTGGPTLDSEQAAKLLVLMCHARHCPGRHRSSRLAEVCRSVKFLMLHLRDCDGRTDVGHPCPLPWCRPCTSLLHHLVQCPDSGQCQ 1523
+PREV YQC AC SY+A V+GNP W LV+Q+CP+CHKMQIPRVDILNPTNN+E H++ LTE ++ GD SC DWDGETS++NS G G GPTLDS+QAAKLLVLMCHARHCPG HRS+RLAEVCRSVKFLMLHLRDCDG+T G PCP+PWC PC SLLHHL+QCP+S C+
Sbjct: 327 EPREVRYQCGACAASYAATVSGNPWWLLVRQECPICHKMQIPRVDILNPTNNVESHIAFLTENASD----GDGSCMDWDGETSDENS---XXXXXXXXXXXXXXXXXXXXXXGSGL-------GPTLDSDQAAKLLVLMCHARHCPGNHRSARLAEVCRSVKFLMLHLRDCDGKTRNGDPCPMPWCEPCMSLLHHLIQCPESTGCK 518
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Match: A0A6H5KT72_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT72_9PHAE) HSP 1 Score: 246 bits (627), Expect = 9.150e-66 Identity = 122/199 (61.31%), Postives = 140/199 (70.35%), Query Frame = 3
Query: 981 WALVKQQCPVCHKMQIPRVDILNPTNNIEGHVSLLTEACAEYGTNGDDSCADWDGETSEDNSDGDCSGDEQGGTAASAMSNLVGEPRGGGSSNSLPTGGPTLDSEQAAKLLVLMCHARHCPGRHRSSRLAEVCRSVKFLMLHLRDCDGRTDVGHPCPLPWCRPCTSLLHHLVQCPDSGQCQVCNPLHLPSPLRALRMMN 1577
W LV+Q+CP CHKMQIPRVDILNPTNN+E H++ LTE ++ GD SC DWDGETS+DNS G G G LDS+QAAKLLVLMCHARHCPG HRS+RLAEVCRSVKFLMLHLRDCDG+T G PCP+PWC PCTSLLHHL+QCP+S C+VC+P HLP PL+ LR +N
Sbjct: 477 WLLVRQECPTCHKMQIPRVDILNPTNNVESHIAFLTENASD----GDGSCMDWDGETSDDNS---XXXXXXXXXXXXXXXXXXXXXXGSGL-------GTILDSDQAAKLLVLMCHARHCPGNHRSARLAEVCRSVKFLMLHLRDCDGKTRNGDPCPMPWCEPCTSLLHHLIQCPESTGCKVCDPEHLPPPLQQLRALN 661
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Match: A0A7S1TU47_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU47_9STRA) HSP 1 Score: 175 bits (444), Expect = 4.620e-46 Identity = 91/225 (40.44%), Postives = 128/225 (56.89%), Query Frame = 3
Query: 903 LQPREVHYQCVACGKSYSAMVAGNPLWALVKQQCPVCHKMQIPRVDILNPTNNIEGHVSLLTEACAEYGTNGDDSCADWDGETSEDNSDGDCSGDEQGGTAASAMSNLVGEPRGGGSSNSLPTGGPTLDSEQAAKLLVLMCHARHCPGRHRSSRLAEVCRSVKFLMLHLRDCDGRTDVGHPCPLPWCRPCTSLLHHLVQCPDSGQCQVCNPLHLPSPLRALRMMN 1577
L PREV YQC C ++Y+ NP WAL ++C C K Q+PR+DI +PTN I+ ++ L+ N ++++ D D S D + S M++ + E+++KLL+L+CHAR CPG+HRS R AEVC+S+K+LMLH+RDC GR G PCP WCRPC +LL HLV+C D C +CNP +LP L+ L+ +N
Sbjct: 29 LLPREVKYQCAVCNEAYTVTFNYNPWWALRLEECMHCKKRQVPRLDISHPTNQID-YLPALSAVAEAMQLN-----------QAQEDKDNDISTDTE-----SDMNDEF-----------------NMSPEKSSKLLILICHARTCPGKHRSRRHAEVCKSIKYLMLHIRDCSGRLPDGQPCPFEWCRPCKNLLSHLVKCFDPNTCAICNPWNLPRSLQELKTLN 219
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Match: A0A6H5KVY2_9PHAE (TAZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVY2_9PHAE) HSP 1 Score: 186 bits (472), Expect = 1.660e-44 Identity = 104/237 (43.88%), Postives = 134/237 (56.54%), Query Frame = 3
Query: 867 KRRRSSSLSIALLQPREVHYQCVACGKSYSAMVAGNPLWALVKQQCPVCHKMQIPRVDILNPTNNIEGHVSLLTEACAEYGTNGDDSCADWDGETSEDNSDGDCSGDEQGGTAASAMSNLVGEPRGGGSSNSLPTGGPTLDSEQAAKLLVLMCHARHCPGRHRSSRLAEVCRSVKFLMLHLRDCDGRTDVGHPCPLPWCRPCTSLLHHLVQCPDSGQCQVCNPLHLPSPLRALRMMN 1577
+R+R SL+ L PR V Y+C C +SYS+ +A NP W+L +CP CH+MQIPRVD + +++ + CAE G G DS E+ G AA + G+ + G L T QA++LLVLM HAR CPGRH + + AEVC+S KFLMLH+RDC G T G PC WCRPC SLL HL++CPD C++C PL LP PLR LR +N
Sbjct: 664 QRKRQRSLAPVLSAPRTVSYECSLCKESYSSEIASNPWWSLFLHECPRCHRMQIPRVDAASAAVSVD----YIHAVCAEEGE-GCDSDGXXXXXXXXXXXXXXXDDREREGIAAFDTDIIAGDSQAGCKEGRLST-------FQASRLLVLMSHARTCPGRHANPKHAEVCQSTKFLMLHMRDCTGHTASGDPCEHRWCRPCKSLLSHLIRCPDPNTCRICTPLDLPGPLRQLRDLN 888
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Match: A0A7R9YGR4_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YGR4_9STRA) HSP 1 Score: 178 bits (451), Expect = 2.450e-44 Identity = 95/227 (41.85%), Postives = 128/227 (56.39%), Query Frame = 3
Query: 903 LQPREVHYQCVACGKSYSAMVAGNPLWALVKQQCPVCHKMQIPRVDILNPTNNIEGH--VSLLTEACAEYGTNGDDSCADWDGETSEDNSDGDCSGDEQGGTAASAMSNLVGEPRGGGSSNSLPTGGPTLDSEQAAKLLVLMCHARHCPGRHRSSRLAEVCRSVKFLMLHLRDCDGRTDVGHPCPLPWCRPCTSLLHHLVQCPDSGQCQVCNPLHLPSPLRALRMMN 1577
L PREV YQC C + YS NP WAL ++CP C+K Q+PR+DI +PTN I+ H +S + EA + N DG+ +E N+D S+L E +L ++++KLL+L+CHAR CPG+HRS R AEVC+S+K+LMLH+RDC GR G CP WCRPC LL HLV+C + C +CNP +LP + L +N
Sbjct: 269 LLPREVKYQCAECNEPYSVTFNYNPWWALRLEECPHCNKRQVPRLDISHPTNQIDYHPALSAVAEAMSLSQAN--------DGKDNEINTD--------------TESDLNDEF--------------SLSPDKSSKLLILICHARTCPGKHRSKRHAEVCKSIKYLMLHIRDCSGRLPDGQSCPFEWCRPCKKLLSHLVKCFEPNTCAICNPFNLPRSMEQLMTLN 459
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Match: D7FUA8_ECTSI (TAZ-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUA8_ECTSI) HSP 1 Score: 175 bits (444), Expect = 1.480e-41 Identity = 100/243 (41.15%), Postives = 132/243 (54.32%), Query Frame = 3
Query: 867 KRRRSSSLSIALLQPREVHYQCVACGKSYSAMVAGNPLWALVKQQCPVCHKMQIPRVDILNPTNNIEGHVSLLTEACAEYGTN------GDDSCADWDGETSEDNSDGDCSGDEQGGTAASAMSNLVGEPRGGGSSNSLPTGGPTLDSEQAAKLLVLMCHARHCPGRHRSSRLAEVCRSVKFLMLHLRDCDGRTDVGHPCPLPWCRPCTSLLHHLVQCPDSGQCQVCNPLHLPSPLRALRMMN 1577
+R+R SL+ L PR V Y+C C +SY + +A NP W+L +CP CH+MQIPRVD + +++ + CAE G G +SC+D D + ++D G E+ G AA + G+ + G L T QA++LLVLM HAR CPG H + + AEVCRS KFL G PC WCRPC SLL HLV+CPD C++C PL LP PLR LR +N
Sbjct: 449 QRKRQRSLAPVLSAPRTVSYECSLCKESYPSEIASNPWWSLFLHECPRCHRMQIPRVDATSAAVSVD----YIHAVCAEEGEGCDSDGYGSESCSDSDDDVTDD-------GREREGIAAFDTDIIAGDSQAGCKEGRLST-------FQASRLLVLMSHARTCPGHHANPKHAEVCRSTKFLXXXXXXXXXXXXNGDPCEHRWCRPCKSLLSHLVRCPDPNTCRICTPLDLPGPLRQLRDLN 673
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Match: A0A7S2KXT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KXT5_9STRA) HSP 1 Score: 166 bits (420), Expect = 3.020e-38 Identity = 97/241 (40.25%), Postives = 123/241 (51.04%), Query Frame = 3
Query: 876 RSSSLSIALLQPREVHYQCVACGKSYSAMVAGNPLWALVKQQCPVCHKMQIPRVDILNPTNNIEGHVSLLTEACAEYGTNGDDSCADWDGETSEDNSDGDCSGDEQGGTAASAMSNLVGEPRGGGSSNSLPT-------GGPTLDSEQAAKLLVLMCHARHCPGRHRSSRLAEVCRSVKFLMLHLRDCDGRTDVGHPCPLPWCRPCTSLLHHLVQCPDSGQCQVCNPLHLPSPLRALRMMN 1577
R SS A R+V Y C C ++Y A NP WAL ++ C C K QIPR+DI P N IE H +LL A A+ G +GD + S GG + N G G S +S P GP L+S AA+LLVLM HA CPGRH++ R +VC SVK+LMLH+RDC G G CP PWCR LL+HL+ C +C++C P LP L + +N
Sbjct: 521 RGSSSHSAPPSSRDVEYICALCNETYRAECTANPWWALTQEPCLKCGKAQIPRIDISAPANTIEYHPALL--AHADEGNDGDSDARN-------------NSSSVSGGGMHMDVGNRGGYDSGSDSEDSDPGEDFGKVYAGPKLESADAAQLLVLMAHASICPGRHKNERHRQVCLSVKYLMLHVRDCPGTISSGDLCPFPWCRKVKHLLYHLISCSKPNECRICRPRSLPKKLIKMAKLN 746
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Match: W7U3G5_9STRA (TAZ-type domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3G5_9STRA) HSP 1 Score: 159 bits (402), Expect = 9.070e-37 Identity = 92/210 (43.81%), Postives = 112/210 (53.33%), Query Frame = 3
Query: 906 QPREVHYQCVACGKSYSAMVAGNPLWALVKQQCPVCHKMQIPRVDILNPTNNIEGHVSLLTEACAEYGTNGDDSCADWDGETSEDNSDGDCSGDEQGGTAASAMSNLVGEPRGGGSSNSLPTGGPTLDSEQAAKLLVLMCHARHCPGRHRSSRLAEVCRSVKFLMLHLRDCDGRTDVGHPCPLPWCRPCTSLLHHLVQCPDSGQCQVCNP 1535
Q R+V YQC C +SYSA + NP WAL KQ+CP C K+QIPR+DI P N ++ H +LL E GDD E G G+E G + VG GG G QA+++L LM HAR CPG H S VC S K+LMLH+RDCDG+T G C WCRPC LL HLV+C +S QC +C P
Sbjct: 437 QVRQVEYQCGVCAESYSAAASLNPWWALEKQECPQCKKLQIPRIDINLPANTMDYHPALLAEE-------GDDXXX---XEGLGLGGSGLVPGEEFRGMGKGGEDSAVG----GGIGVPEEEDGQAFSPAQASQILELMSHARTCPGHHHSEAHRAVCTSTKYLMLHVRDCDGKTLDGEACGFSWCRPCKHLLGHLVRCYESEQCSICRP 632
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Match: A0A7S4AF96_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AF96_9STRA) HSP 1 Score: 158 bits (399), Expect = 4.930e-36 Identity = 90/256 (35.16%), Postives = 128/256 (50.00%), Query Frame = 3
Query: 909 PREVHYQCVACGKSYSAMVAGNPLWALVKQQCPVCHKMQIPRVDILNPTNNIEGHVSLLTEA-------------------------CAEYGTNGDDSCADWDGETSEDNSDGDCSGDEQGGTAASAMSNLVGEPRGGGSSNSLPTGGPTLDSEQAAKLLVLMCHARHCPGRHRSSRLAEVCRSVKFLMLHLRDCDGRTDVGHPCPLPWCRPCTSLLHHLVQCPDSGQCQVCNPLHLPSPLRAL------RMMNHR 1583
PR V Y C C ++YS+ NP WAL + +CP CHK Q+PR+DI +P N IE H +LL+ ++ +D ++ D + SE + D G + S + ++ R + GP +E AAKLL+L+ HA CP +H+S + ++CRSVK++MLH+RDC G T CP PWCR LL+HLV C + QC +C+P LP L+ L RM HR
Sbjct: 144 PRVVEYICSQCSEAYSSNCEYNPWWALAQHKCPKCHKTQVPRIDISSPANTIEYHPALLSHLEDGGRGGGGTIPPNGAQAVVPAMPIVSQIPVGANDVNSESDSDLSELSDDNISIGSLKAAELESDLQSMTPAERAEHETFGSEYEGPVFPNEHAAKLLILIGHAATCPCQHKSEKQRDICRSVKYMMLHVRDCPGTTSTFDVCPFPWCRKVKHLLYHLVACAEPDQCTICSPSDLPKGLKELVGLNAHRMKKHR 399
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Match: A0A448ZEC8_9STRA (TAZ-type domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZEC8_9STRA) HSP 1 Score: 155 bits (392), Expect = 1.270e-34 Identity = 93/256 (36.33%), Postives = 126/256 (49.22%), Query Frame = 3
Query: 909 PREVHYQCVACGKSYSAMVAGNPLWALVKQQCPVCHKMQIPRVDILNPTNNIEGHVSLLTEA-------CAEYGTNG------------------DDSCADWDGETSEDNSDGDCSGDEQGGTAASAMSNLVGEPRGGGSSNSLPTGGPTLDSEQAAKLLVLMCHARHCPGRHRSSRLAEVCRSVKFLMLHLRDCDGRTDVGHPCPLPWCRPCTSLLHHLVQCPDSGQCQVCNPLHLPSPLRAL------RMMNHR 1583
PR V Y C C ++YS+ NP WAL + +CP C K QIPR+DI +P N IE H +LL+ +NG D ++ D + SE + D G + S + ++ R + GP L E A+KLL+LM HA CP +H+ + +VCRSVK++MLH+RDC G T CP PWCR LL+HLV C + QC +C+P LP L+ L RM HR
Sbjct: 799 PRVVEYLCSQCSEAYSSTCEFNPWWALAQHKCPKCGKTQIPRIDISSPANTIEYHPALLSHLEDGGRGNAGSIPSNGVRAVVPAMPIVSQIPDGASDVNSESDSDLSELSDDNISIGSLKAAELESDLRSMTPAERAEHETFGSEYKGPVLSDEHASKLLILMGHAATCPCQHKLEKHRDVCRSVKYMMLHVRDCPGTTSTFDVCPFPWCRKVKHLLYHLVSCKEPDQCAICSPKELPKGLKGLVGLNGHRMKKHR 1054 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6173.13896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6173.13896.1 >prot_H-paniculata_contig6173.13896.1 ID=prot_H-paniculata_contig6173.13896.1|Name=mRNA_H-paniculata_contig6173.13896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=385bp MPVTQPAQSTAQSDKAQPLSAFLDKSSQEAATATAVGSHGTVKTPTASATback to top mRNA from alignment at H-paniculata_contig6173:5000..12313+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6173.13896.1 ID=mRNA_H-paniculata_contig6173.13896.1|Name=mRNA_H-paniculata_contig6173.13896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7314bp|location=Sequence derived from alignment at H-paniculata_contig6173:5000..12313+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6173:5000..12313+ >mRNA_H-paniculata_contig6173.13896.1 ID=mRNA_H-paniculata_contig6173.13896.1|Name=mRNA_H-paniculata_contig6173.13896.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2310bp|location=Sequence derived from alignment at H-paniculata_contig6173:5000..12313+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |