prot_H-paniculata_contig617.13890.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig617.13890.1
Unique Nameprot_H-paniculata_contig617.13890.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length214
Homology
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BLAST of mRNA_H-paniculata_contig617.13890.1 vs. uniprot
Match: D8LE73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE73_ECTSI)

HSP 1 Score: 114 bits (286), Expect = 9.190e-30
Identity = 56/79 (70.89%), Postives = 65/79 (82.28%), Query Frame = 0 
Query:  135 MDELLDDINSADSVLLVGHGHGKANLAEGLAAALYDHQPNLTEKIENVLRLDGKHITQNQLLALGRRHLLHAEDPRRPV 213
            M+EL   I  ADSVLLVGHG+ K+N+AE LA+AL + QP LT+KIE+VLR+DGKHITQNQLL LGRRHL H EDPRRP 
Sbjct:    1 MEELSGVIEKADSVLLVGHGNAKSNIAEVLASALCERQPGLTDKIEDVLRVDGKHITQNQLLKLGRRHLTHTEDPRRPT 79
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig617.13890.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LE73_ECTSI9.190e-3070.89Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..213
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig617contigH-paniculata_contig617:1828..8652 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig617.13890.1mRNA_H-paniculata_contig617.13890.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig617 863..8722 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig617.13890.1 ID=prot_H-paniculata_contig617.13890.1|Name=mRNA_H-paniculata_contig617.13890.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp
MRHALLRHVMFMVVCSVSRAFVLPAPVVLRIAGSSNTVRQEQATTQPGAR
VVLHQQANADEAPEGSLMLIEVTKKHAKVFKSVAKGSVAEMVAPVDEWRL
HEAGNAEHRSQGLGKHHAEKVDPLANSRYLIKFYMDELLDDINSADSVLL
VGHGHGKANLAEGLAAALYDHQPNLTEKIENVLRLDGKHITQNQLLALGR
RHLLHAEDPRRPV*
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