prot_H-paniculata_contig61683.13889.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61683.13889.1
Unique Nameprot_H-paniculata_contig61683.13889.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length92
Homology
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Match: A0A061F8M9_THECC (Cysteine-rich RLK (RECEPTOR-like protein kinase) 8 n=1 Tax=Theobroma cacao TaxID=3641 RepID=A0A061F8M9_THECC)

HSP 1 Score: 72.8 bits (177), Expect = 5.580e-13
Identity = 39/92 (42.39%), Postives = 55/92 (59.78%), Query Frame = 0
Query:    1 ATSVEPKNHQEAQASPEWEHGQTAEEVEMQGLIDNGAWTQMERLKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP 92
            +T  EP ++Q+A A   W+    A ++E++ L DNG W+ ++   N   V    +YK K+  DGKVE+YK RLVA G  QI+G  YQE  SP
Sbjct:  155 STIFEPNSYQKAVAHSHWKE---AMDIELKALEDNGTWSIVQLPSNYHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQETFSP 243          
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Match: UPI00092FCD17 (uncharacterized protein LOC109338179 n=1 Tax=Lupinus angustifolius TaxID=3871 RepID=UPI00092FCD17)

HSP 1 Score: 63.2 bits (152), Expect = 1.870e-10
Identity = 37/88 (42.05%), Postives = 48/88 (54.55%), Query Frame = 0
Query:    5 EPKNHQEAQASPEWEHGQTAEEVEMQGLIDNGAWTQMERLKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP 92
            +PK ++E     + E  Q A E EM+ +  N  WT +E  K+   +    +Y + IGEDGKVE YK RLVA G  Q  GI Y E  SP
Sbjct:   49 DPKCYEEVMQISDNEKWQEATESEMESMKTNKVWTLVEASKDIKPIVCKWVYNKNIGEDGKVETYKARLVAKGYCQKGGIDYDETYSP 136          
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Match: UPI000900F32D (uncharacterized protein LOC109147109 n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900F32D)

HSP 1 Score: 63.5 bits (153), Expect = 2.080e-10
Identity = 34/88 (38.64%), Postives = 45/88 (51.14%), Query Frame = 0
Query:    5 EPKNHQEAQASPEWEHGQTAEEVEMQGLIDNGAWTQMERLKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP 92
            EP    EA  +P W     A   E+Q L D+G W   + L     +    +YK K   DG +E+YK RLV  G+RQIKG+ Y E  +P
Sbjct:   80 EPTLFSEAVQAPHWRE---AMRQELQSLEDDGTWILEDLLPGHKAIDNKWVYKVKYNADGSIERYKARLVVQGDRQIKGVDYNETFAP 164          
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Match: A0A6L2P5K6_TANCI (Integrase catalytic domain-containing protein n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2P5K6_TANCI)

HSP 1 Score: 65.1 bits (157), Expect = 2.870e-10
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0
Query:    2 TSVEPKNHQEAQASPEWEHGQTAEEVEMQGLIDNGAWTQMERLKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP 92
            T  +PK  +EA + P W      + + ++ L +NG W  ++    K  +    IYKRK+  DG V++ K RLV  GNRQ+KG+ Y+E  +P
Sbjct:  466 TQKDPKGFKEAISDPGW-----CDAMNLRALEENGTWELIDLPSGKKAIRIHWIYKRKLKSDGYVDRKKARLVIQGNRQLKGVDYEETFAP 551          
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Match: A0A2P4X8M5_9STRA (Putative Pol Polyprotein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4X8M5_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.300e-9
Identity = 31/83 (37.35%), Postives = 50/83 (60.24%), Query Frame = 0
Query:    4 VEPKNHQEAQASPEWEHGQTAEEVEMQGLIDNGAWTQMERLKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHY 86
            V+PKN++EA   P  E  + A   E++ L  N  W  + + +N  ++ +  +YK KI  DG+VE+Y+ RLVA G+ Q+ G+ Y
Sbjct:   17 VDPKNYREAMRDPRVEKWKEAMRTEIEALEHNDTWEVIVKPRNAKLLHSKWVYKLKIYADGRVERYRARLVARGDEQVYGVDY 99          
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Match: UPI001CB79F24 (hypothetical protein n=1 Tax=Blastococcus sp. CPCC 205250 TaxID=2732513 RepID=UPI001CB79F24)

HSP 1 Score: 61.6 bits (148), Expect = 1.540e-9
Identity = 35/91 (38.46%), Postives = 52/91 (57.14%), Query Frame = 0
Query:    2 TSVEPKNHQEAQASPEWEHGQTAEEVEMQGLIDNGAWTQMERLKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP 92
            TS EP   +EA+AS +    + A + EM+ L  N  W  ++  K++  +    ++KRK   +GK+ KYK RLVA G  QI+G+ Y E  SP
Sbjct:   74 TSDEPGTVKEARASEDANQWEEAMKDEMKSLDQNHTWNLVKLPKDRKAIGCKWVFKRKQDAEGKIGKYKARLVAKGYAQIEGVDYAEIFSP 164          
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Match: UPI0008494023 (uncharacterized mitochondrial protein AtMg00810 n=1 Tax=Theobroma cacao TaxID=3641 RepID=UPI0008494023)

HSP 1 Score: 62.8 bits (151), Expect = 1.780e-9
Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 0
Query:   26 EVEMQGLIDNGAWTQMERLKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP 92
            ++E++ L DNG W+ ++   N   V    +YK K+  DGKVE+YK RLVA G  QI+G  YQ+  SP
Sbjct:    2 DIELKALEDNGTWSIVQLPSNCHAVGCKWVYKVKLNADGKVERYKARLVAKGYNQIEGFDYQKTFSP 68          
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Match: A0A0J7K690_LASNI (Retrovirus-related pol polyprotein from transposon tnt 1-94 (Fragment) n=1 Tax=Lasius niger TaxID=67767 RepID=A0A0J7K690_LASNI)

HSP 1 Score: 62.8 bits (151), Expect = 1.890e-9
Identity = 35/88 (39.77%), Postives = 49/88 (55.68%), Query Frame = 0
Query:    5 EPKNHQEAQASPEWEHGQTAEEVEMQGLIDNGAWTQMERLKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP 92
            EP+ ++EA AS E E  + A E E   LI N  WT+ +    +  ++  +I+K+K   DGKV +YK RLV  G  Q  GI Y E  +P
Sbjct:  564 EPQTYEEAMASNEVEQWRRAIEEEESALIKNNTWTKTKLPTGRKAITAKIIFKKKRDADGKVHRYKARLVVRGFSQRPGIDYNETYAP 651          
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Match: A0A151T9B6_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T9B6_CAJCA)

HSP 1 Score: 62.4 bits (150), Expect = 2.580e-9
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 0
Query:    4 VEPKNHQEAQASPEWEHGQTAEEVEMQGLIDNGAWTQMERLKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP 92
             EP N +EA    +W +   A ++E++ +  NG W  ++R K   VV    +YK K+ E GKV+K+K RLV  G  Q  GI Y E  +P
Sbjct:  787 AEPLNFEEAVKIEKWRN---AMDIEIEAIEKNGTWELIDRPKGAKVVGVKWVYKTKLNEKGKVDKFKARLVVKGYAQQYGIDYTEVFAP 872          
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI)

HSP 1 Score: 61.6 bits (148), Expect = 4.890e-9
Identity = 32/90 (35.56%), Postives = 53/90 (58.89%), Query Frame = 0
Query:    3 SVEPKNHQEAQASPEWEHGQTAEEVEMQGLIDNGAWTQMERLKNKLVVSTMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP 92
            S EP+ +QEA + P+ E  + A   E+        + ++ER +N+ VV    +++ K G DGK++KYK RLVA G  Q++G+ Y +  +P
Sbjct:  961 SDEPRTYQEAMSRPDAEQWKAACAEELLSFAKAELYDEVERPRNRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAP 1050          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61683.13889.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A061F8M9_THECC5.580e-1342.39Cysteine-rich RLK (RECEPTOR-like protein kinase) 8... [more]
UPI00092FCD171.870e-1042.05uncharacterized protein LOC109338179 n=1 Tax=Lupin... [more]
UPI000900F32D2.080e-1038.64uncharacterized protein LOC109147109 n=1 Tax=Ipomo... [more]
A0A6L2P5K6_TANCI2.870e-1036.26Integrase catalytic domain-containing protein n=1 ... [more]
A0A2P4X8M5_9STRA1.300e-937.35Putative Pol Polyprotein n=1 Tax=Phytophthora palm... [more]
UPI001CB79F241.540e-938.46hypothetical protein n=1 Tax=Blastococcus sp. CPCC... [more]
UPI00084940231.780e-944.78uncharacterized mitochondrial protein AtMg00810 n=... [more]
A0A0J7K690_LASNI1.890e-939.77Retrovirus-related pol polyprotein from transposon... [more]
A0A151T9B6_CAJCA2.580e-938.20Retrovirus-related Pol polyprotein from transposon... [more]
A0A060SSE0_PYCCI4.890e-935.56Integrase catalytic domain-containing protein n=1 ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 38..92
e-value: 6.0E-8
score: 32.6
NoneNo IPR availablePANTHERPTHR11439:SF264coord: 4..92
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 4..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61683contigH-paniculata_contig61683:131..406 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61683.13889.1mRNA_H-paniculata_contig61683.13889.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61683 131..406 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61683.13889.1 ID=prot_H-paniculata_contig61683.13889.1|Name=mRNA_H-paniculata_contig61683.13889.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bp
ATSVEPKNHQEAQASPEWEHGQTAEEVEMQGLIDNGAWTQMERLKNKLVV
STMMIYKRKIGEDGKVEKYKCRLVAHGNRQIKGIHYQEASSP
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like