mRNA_H-paniculata_contig6168.13888.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Match: D8LCI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCI8_ECTSI) HSP 1 Score: 511 bits (1317), Expect = 1.210e-175 Identity = 238/401 (59.35%), Postives = 294/401 (73.32%), Query Frame = 1
Query: 1 LQGFTSGEANGIAGPDFALGELVLSSDSND--SWLAGWREGSFVQDQAGFEDSTLLLQAKVGLEAGTWHEVVVYRSNGIRAQASKQKKHMACFYFFRSGFCGIAENASSSTISVQSASYPPWNSSEEFAYSQTVGPGCRDLNYCNGQGECDYCLQKCTCAGGFGSDDEVVER-DIARDCSQRACPAGVSWGLVLEGRPRPDPDGSHTLAECSNKGMCVREYGLCSCDDGFGGRACERYACPNSCSGHGACRSMREMGLMAAAEPLVNTTAVDGVG------EGYEVQYGWGVAAGTRSWDSRSVYGCVCESSWTVGLDMGETQQAEYFGADCSLKHCPTGDDPETDDDETDCSGHMAEGQRGVGSDGNLCHIDCSNRGLCDYSTGVCRCFDGYHGQACNKK 1176
L+GFTSGE NG G DF G+L+L+ +S++ +WLA W EG++V+ + G+EDS L LQA + AG HEV VYRSNGIRAQ CG+ EN ++STISV S+S PPWNS+ EF +SQ VGPGCR+LNYC+GQGECDYC Q+C C GFGS E++ D+ARDCS+ CP+GVSWG VL G PRPDP+ SH +AECSN G C+R +G+C C+ G+ GRACERYACP CSG+GACR+MREMG+M AEPLVN++ +G+EV YGW GT +W+SRSV+GCVC+SSW VGL G+TQQA+YFG DCS+ HCPTGDDP+T DETDC A+G RGVGS GNLCH+DCSNRG+CDY+TGVC CFDGYHGQA ++
Sbjct: 208 LKGFTSGEGNGTEGRDFLHGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPIPAGELHEVTVYRSNGIRAQ------------------CGMGENETTSTISVVSSSDPPWNSTGEFTFSQAVGPGCRELNYCSGQGECDYCRQRCDCPEGFGSPSELLHAPDVARDCSEMTCPSGVSWGPVLAGSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERYACPEDCSGNGACRNMREMGMMRTAEPLVNSSTEASSSSRGDSADGFEVVYGWDSPEGTATWESRSVFGCVCDSSWEVGLGRGQTQQAQYFGPDCSMLHCPTGDDPDTLIDETDCENKTADGGRGVGSAGNLCHVDCSNRGICDYTTGVCSCFDGYHGQASQQR 590
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Match: A0A6H5KP52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP52_9PHAE) HSP 1 Score: 446 bits (1147), Expect = 5.320e-150 Identity = 234/459 (50.98%), Postives = 286/459 (62.31%), Query Frame = 1
Query: 1 LQGFTSGEANGIAGPDFALGELVLSSDSND--SWLAGWREGSFVQDQAGFEDSTLLLQAKVGLEAGTWHEVVVYRSNGIRAQASKQKKHMACFYFFRSGFCGIAENASSSTISVQSASYPPWNSSEEFAYSQTVGPGCRDLNYCNGQ-GECDYCL--QKCTCAGGFGSDDEVVERDIAR-DCSQRAC---PAGVSWGLVLEGR------------------------PRPDPDGSHTLAECSNKGMCVREYGLCSCDDGFGGRACER----------------YACPNSCSGHGACRSMREMGLMAAAEPLVNTTAVDGVG------EGYEVQYGWGVAAGTRSWDSRSVYGCVCESSWTVGLDMGETQQAEYFGADCSLKHCPTGDDPETDDDETDCSGHMAEGQRGVGSDGNLCHIDCSNRGLCDYSTGVCRCFDGYHGQACNKKQADGYGFNTDGL 1212
L+GFTSGE NG G DF G+L+L+ +S++ +WLA W EG++V+ + G+EDS L LQA + AG HEV VYRSNGIRAQ CG+ EN ++STISV SAS PPWNS+ EF +SQ VGPGCR+LNYC+GQ G + K C DE + R C +R P G GLV PRPDP+ SH +AECSN G C+R +G+C C+ G+ GRACER YACP CSG+GACR+MREMG+M AEPLVN++ +G+EV YGW GT +W+SRS++GCVC+SSW VGL G+TQQA+YFG DCS+ HCPTGDDP+T DETDC A+G RGVGS GNLCH+DCSNRG+CDY+TGVC CFDGYHGQACN KQ+DGYGFNT GL
Sbjct: 152 LKGFTSGEGNGTEGRDFLYGDLLLAGESSNGSTWLASWEEGTYVEGERGYEDSMLRLQALAPVPAGELHEVTVYRSNGIRAQ------------------CGMGENETTSTISVVSASDPPWNSTGEFTFSQAVGPGCRELNYCSGQVGRAIHLSFRSKIVC-------DESFTMGVGRRKCGKRPAILQPNGKDMGLVASPANSGSDPLVSFPFCRPSTAVAASRSPRPDPETSHAMAECSNMGTCIRSFGICLCETGYAGRACERQADIHIDMQPSVSQPKYACPEDCSGNGACRNMREMGMMRTAEPLVNSSTEASSSSRGDSADGFEVVYGWDSPEGTATWESRSMFGCVCDSSWEVGLGRGQTQQAQYFGPDCSMLHCPTGDDPDTLIDETDCENKTADGGRGVGSAGNLCHVDCSNRGICDYTTGVCSCFDGYHGQACNSKQSDGYGFNTVGL 585
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Match: A0A7S3XTV6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTV6_HETAK) HSP 1 Score: 293 bits (751), Expect = 5.190e-93 Identity = 167/402 (41.54%), Postives = 224/402 (55.72%), Query Frame = 1
Query: 1 LQGFTSGEANGIAGPDFALGELVLSSDSNDSWLAGWREGSFVQDQAGFEDSTLLLQA-KVGLEAGTWHEVVVYRSNGIRAQASKQKKHMACFYFFRSGFCGIAENASSSTISVQSASYPPWNSSEEFAYSQTVGPGCRDLNYCNGQGECDYCLQKCTCAGGFGSDDEVVERDIARDCSQRACPAGVSWGLVLEGRPRPDPDGSHTLAECSNKGMCVREYGLCSCDDGFGGRACERYACPNS----CSGHGACRSMREMGLMAAAEPLVNTTAVDGVGEGYEVQYGWGVAA-GTRS---WDSRSVYGCVCESSWTVGLDMGETQQAEYFGADCSLKHCPTGDDPETDD-DETDCSGHMAEGQRGVGSDGNLCHIDCSNRGLCDYSTGVCRCFDGYHGQACNKK 1176
L GFT+G + G D ++G +V +S N + W EG FV + GF +STL + AG ++V RS GIRAQ CGI + V++A+ S F ++ VGPGCR L+YC+ G CDYCLQKCTC GFG+ ++ + DI+ DCS++ CPAG ++G + P DG H ECS G C R G C C G+ GRACER+ CP+S CSGHG C M+++ + A PL N + ++Y WG+ A GT + WD+ GCVC+SSW VGL+ +TQ AE+FG C L+ CP+GDDP T + DE DC G A G RGVG +GN CH +C+ RG CDY+ G+C CF G++G C K
Sbjct: 11 LGGFTTGNLS-TNGSDLSMGAVVFASGYNPLFGGQWTEGEFVSQEMGFYNSTLRVTLLNTSYAAGDTVSIIVARSTGIRAQ------------------CGIDGATPHWWLKVEAAAAN--TSLTYFDTTEAVGPGCRHLSYCSDAGTCDYCLQKCTCYEGFGATTDIADIDISLDCSEKVCPAGPAFGHL----PASSTDG-HAPRECSAAGACNRNTGECLCFTGWWGRACERHECPSSEGIACSGHGRCFKMKDLAKFSDAMPLSNRNTSNAT-----IEY-WGMDADGTLADSVWDAEMGSGCVCDSSWEVGLESNQTQAAEWFGPACELRRCPSGDDPMTSEIDEEDCEGVAAAGGRGVGKEGNRCHHECAGRGTCDYTAGLCSCFPGFYGHNCALK 380
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Match: A0A7S2AMA5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AMA5_9STRA) HSP 1 Score: 281 bits (719), Expect = 3.600e-89 Identity = 154/353 (43.63%), Postives = 193/353 (54.67%), Query Frame = 1
Query: 145 EDSTLLLQAKVGLEAGTWHEVVVYRSNGIRAQASKQKKHMACFYFFRSGFCGIAENASSSTI-----SVQSASYPPWNSSEEFAYSQTVGPGCRDLNYCNGQGECDYCLQKCTCAGGFGSDDEVVERD--IARDCSQRACPAGVSWGLVLEGRPRPDPDGSHTLAECSNKGMCVREYGLCSCDDGFGGRACERYACPNSCSGHGACRSMREMGLMAAAEPLVNTTAVDGVGEGYEVQYGWGVAAGTRSWDSRSVYGCVCESSWTVGLDMGETQQAEYFGADCSLKHCPTGDDPETDDDETDCSGHMAEGQRGVGSDGNLCHIDCSNRGLCDYSTGVCRCFDGYHGQACNKKQA 1182
E STLL G+ +E ++YR NGI+ +CGI EN I S+ + + W S + S G GC L+ C+G+G CD+C Q C C G+G D + + I+ DCS+R CP ++G V D +H LAECSN G+C R G C C GF G AC+R +CPN CSGHG C SM E+ AAA PL TA D YG+ +SWD+ S+ CVC+S WTVGL G+TQ E+FG DCSL+HC +GDDPET DET C A G RGVG GN CH+DCSNRG+CDYSTG C CF G++G C K A
Sbjct: 3 EGSTLL--------KGSLYEFIIYRQNGIKL------------------YCGIGENDPDLKIRWGNSSLATGWFGEWMSIQS---STRAGSGCTALSDCHGRGVCDFCKQTCVCYEGYGKDTDTITAGGTISVDCSERVCPYAKAFGDVPY-----STDSAHQLAECSNNGICERTSGSCQCFPGFEGDACQRRSCPNDCSGHGQCLSMAELVNAAAAHPL---TAAD-------TTYGFSAPVSAQSWDAESLQACVCDSRWTVGLGPGQTQTGEWFGPDCSLQHCSSGDDPETKVDETACFNKTAPGGRGVGEAGNRCHVDCSNRGICDYSTGECACFQGWYGSNCGAKVA 311
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Match: A0A7S3NPL4_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NPL4_9STRA) HSP 1 Score: 291 bits (744), Expect = 4.540e-89 Identity = 168/418 (40.19%), Postives = 234/418 (55.98%), Query Frame = 1
Query: 1 LQGFTSGEANGIAG---PDFALGELVLSSDSNDSWLAG-WREGSFVQDQA-GFEDSTLLLQAKVGLE--AGTWHEVVVYRSNGIRAQASKQKKHMACFYFFRSGFCGIAENASSSTISVQSASY---------PPWNSSEEFAYSQT-VGPGCRDLNYCNGQGECDYCLQKCTCAGGFGSDDEVVERDIAR-DCSQRACPAGVSWGLVLEGRPRPDPDGSHTLAECSNKGMCVREYGLCSCDDGFGGRACERYACPNS------CSGHGACRSMREMGLMAAAEPLVNTTAVDGVGEGYEVQYGWGVAAGTRSWDSRSVYGCVCESSWTVGLDMGETQQAEYFGADCSLKHCPTGDDPETDDDETDC---SGHMAEGQRGVGSDGNLCHIDCSNRGLCDYSTGVCRCFDGYHGQACNK 1173
L G+TSG+A+GIAG P AL + + + + +++ G W EG Q GF +ST++ Q + G+ AGT E+VV R+ IRAQ CG+ S +I + A+ P+N E S T VG GC LN+CNG G CDYCL +C C +G+ E + R ++ C +++CP G +WG + P+P+ T+AECSN G+C R G CSC GF G ACER +CP + CSGHG+C ++ E+ ++ A PL + + Y+ T +WD+ + CVC+SSW VGLD GE+ ++E+FG DCSL+HCP+GDDP T DETDC S G +G +G+ CHIDCSNRG+CDY TG+C CF+G+ G ACNK
Sbjct: 225 LSGWTSGKADGIAGNNIPVLALQDGAVLTGNTSAYVTGSWYEGCCYQKNLPGFSNSTIIFQIRSGISITAGTLVELVV-RNGQIRAQ------------------CGMPAPYSEQSIRILKAANIFTQLYNDSSPYNIPETVISSATIVGDGCNSLNFCNGHGTCDYCLNRCECYENYGAPYEAMYRQLSDWTCEEKSCPYGPAWGAM----PKPNESPHGTIAECSNAGLCKRTTGKCSCFAGFEGSACERKSCPGNKADTGVCSGHGSCATITELATLSDALPLSSN-----LNRSYDFT---AAEFPTNTWDAYRLTACVCDSSWPVGLDQGESDKSEWFGPDCSLRHCPSGDDPMTRRDETDCYNVSTSTLLGGSALGKNGSKCHIDCSNRGICDYETGICNCFNGFGGPACNK 611
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Match: A0A7S1UJF5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJF5_9STRA) HSP 1 Score: 270 bits (690), Expect = 7.830e-83 Identity = 146/325 (44.92%), Postives = 185/325 (56.92%), Query Frame = 1
Query: 202 EVVVYRSNGIRAQASKQKKHMACFYFFRSGFCGIAENASSSTISVQSASYPPWNSSEEFAYSQTVGPGCRDLNYCNGQGECDYCLQKCTCAGGFGSDDEVVERDIARDCSQRACPAGVSWGLVLEGRPRPDPDGSHTLAECSNKGMCVREYGLCSCDDGFGGRACERYACPNSCSGHGACRSMREMGLMAAAEPLVNTTAVDGVGEGYEVQYGWGVAAGTRSWDSRSVYGCVCESSWTVGLDMGETQQAEYFGADCSLKHCPTGDDPETDDDETDCSGHMAEGQR---GVGSDGNLCHIDCSNRGLCDYSTGVCRCFDGYHGQAC 1167
E+VV R+ Q S + F F CGI EN ISV + + E ++ VGP C + C G G CD C KC C G+GS +V E + DCS+R CP G +WG V G +H AECSN+G+C R G+C+C GFGG AC++ CPN CSGHG C +M E+G ++ A PLV+++ V YG T +WDS CVC+SSW+VGL GETQ+ E+FGADCSLK CPTGDDP T ETDCSG G G+ GNLCH+DCSNRG CD++ G C CF+G+HG+ C
Sbjct: 153 ELVVDRAMAANTQLSIKIDADNGFMFH----CGINENEGIK-ISVTDDALGALVTDELMDHTM-VGPACTNKGTCFGHGTCDACRDKCVCDDGYGSTSDVYEIYVFPDCSERVCPKGRAWGDVPTGAT-----AAHADAECSNRGVCDRTTGICACVAGFGGEACQKKLCPNDCSGHGLCMNMHELGGISRALPLVSSSQV----------YGSSANEATTAWDSLLNMACVCDSSWSVGLASGETQEPEWFGADCSLKRCPTGDDPMTSAVETDCSGVAPVGGSTTGATGASGNLCHVDCSNRGKCDHTLGTCTCFEGFHGENC 456
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Match: A0A7S2G565_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G565_9STRA) HSP 1 Score: 266 bits (679), Expect = 6.940e-81 Identity = 151/395 (38.23%), Postives = 206/395 (52.15%), Query Frame = 1
Query: 1 LQGFTSGEANGIAGPDFALGELVLSSDSNDSWLAGWREGSFVQDQAGFEDSTLLLQAKVGLE--AGTWHEVVVYRSNGIRAQASKQKKHMACFYFFRSGFCGIAENASSSTISVQSASYPPWNSSEEFAYSQTVGPGCRDLNYCNGQGECDYCLQKCTCAGGFGSDDEVVERD---IARDCSQRACPAGVSWGLVLEGRPRPDPDGSHTLAECSNKGMCVREYGLCSCDDGFGGRACERYACPNSCSGHGACRSMREMGLMAAAEPLVNTTAVDGVGEGYEVQYGWGVAAGTRSWDSRSVYGCVCESSWTVGLDMGETQQAEYFGADCSLKHCPTGDDPETDD-DETDCSGHMAEGQRGVGSDGNLCHIDCSNRGLCDYSTGVCRCFDGYHGQAC 1167
L FTSG+ G + G S + W EG + F +S++ ++ K G++ AGT + V+ +++GI+ +CG+ EN + ++ N+ A S+ +G C +L C+ G CD+C Q C C GFG+ ++ V + IA +C+ R CP G ++ V G +H ECSN G+C R G C C DG+ G AC+R CPN CSGHG C ++ E+ A PL T D G +YG +SWD + CVC+SSW VGLD GE Q +E+FG DCSL+HCP GDDP T+ DETDC G +A G RG GS GNLCH+DCSNRG CD+ TG C CF G+ G C
Sbjct: 114 LPRFTSGDCKQTKGANIDYGSFYHSLTTFVDMR--WDEGDWDYSSMPFANSSITMRVKEGMQLMAGTTYTFVIMKASGIKI------------------YCGLEENWEKLMLWTNASGSTSRNAPVSVAISEQIGDACENLKLCSEHGTCDHCKQVCECDEGFGAVNDSVTKGGYPIAINCAMRTCPLGPAYADVPYGMY-----AAHQDTECSNNGLCDRAEGFCECFDGWEGDACQRRPCPNDCSGHGRCLTLEELANEKEALPL---THQDPAGANL-YRYGTVSEMRNKSWDHATFSACVCDSSWGVGLDAGEKQHSEWFGPDCSLRHCPGGDDPGTETVDETDCGGKVAAGGRGTGSTGNLCHVDCSNRGKCDHMTGECTCFLGWTGSDC 479
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Match: A0A485KUX1_9STRA (Aste57867_11942 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUX1_9STRA) HSP 1 Score: 253 bits (647), Expect = 7.020e-79 Identity = 123/263 (46.77%), Postives = 157/263 (59.70%), Query Frame = 1
Query: 382 YSQTVGPGCRDLNYCNGQGECDYCLQKCTCAGGFGSDDEVVERDIARDCSQRACPAGVSWGLVLEGRPRPDPDGSHTLAECSNKGMCVREYGLCSCDDGFGGRACERYACPNSCSGHGACRSMREMGLMAAAEPLVNTTAVDGVGEGYEVQYGWGVAAGTRSWDSRSVYGCVCES-SWTVGLDMGETQQAEYFGADCSLKHCPTGDDPETDDDETDCSGHMAEGQRGVGSDGNLCHIDCSNRGLCDYSTGVCRCFDGYHGQAC 1167
Y+ G C L CNG G C+ + CTC G+GS ++ +A DCS R CP+G SW + D +HT+ ECS+ G+C G C C GFGG ACER CPN CSGHG C SMR M +M+ A PL T G A T +WD ++GCVC++ SWTVGL G+ Q A+YFGADCSL HCP+G+DP T DE DCS A G G G+ GN+C ++CSNRG+CD++TG+C CFDG++G C
Sbjct: 26 YNPVGGDLCNSLGDCNGHGFCNTATKVCTCQNGWGSATDISINKLA-DCSSRVCPSGPSWSSIPTAS-----DTAHTVTECSDSGLCNTATGECKCFPGFGGAACERATCPNDCSGHGICVSMRNMAMMSNAMPLSPPTTYQGF-------------ALTTTWDQDRLFGCVCDAPSWTVGLASGQVQAAQYFGADCSLMHCPSGNDPMTTADELDCSNVAAPGGFGTGASGNICFVECSNRGVCDFTTGLCTCFDGFYGANC 269
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Match: A0A8K1CPX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPX8_PYTOL) HSP 1 Score: 247 bits (631), Expect = 5.930e-77 Identity = 119/251 (47.41%), Postives = 149/251 (59.36%), Query Frame = 1
Query: 415 LNYCNGQGECDYCLQKCTCAGGFGSDDEVVERDIARDCSQRACPAGVSWGLVLEGRPRPDPDGSHTLAECSNKGMCVREYGLCSCDDGFGGRACERYACPNSCSGHGACRSMREMGLMAAAEPLVNTTAVDGVGEGYEVQYGWGVAAGTRSWDSRSVYGCVCESSWTVGLDMGETQQAEYFGADCSLKHCPTGDDPETDDDETDCSGHMAEGQRGVGSDGNLCHIDCSNRGLCDYSTGVCRCFDGYHGQAC 1167
L CNG G C+ + CTC G+G+ +V A DCSQR CPAG SWG + D +H LAECS+ G+C R G C C G+ G AC+R C N CSGHG C SMREM + +A PL +G A T +WD ++GC+C+SSW VGL G+ QQ+E+FG DCSL CPTGDDP T DETDC+G A VG GN CH+DC+NRG+CDY++G C CF G++G C
Sbjct: 2 LANCNGHGRCNTATKTCTCFEGYGAATDVAVYK-APDCSQRVCPAGPSWGGIPT-----DETVAHALAECSDMGVCDRSSGQCKCYRGYEGSACQRSTCLNGCSGHGRCVSMREMATITSAFPLSPAATYEG-------------AEDTTTWDQNRIFGCLCDSSWAVGLGSGQRQQSEWFGPDCSLLRCPTGDDPLTAVDETDCNGKTATDSTSVGQPGNRCHVDCANRGICDYTSGTCMCFSGFYGSNC 233
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Match: D7FYV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV5_ECTSI) HSP 1 Score: 246 bits (629), Expect = 2.940e-76 Identity = 123/265 (46.42%), Postives = 157/265 (59.25%), Query Frame = 1
Query: 403 GCRDLNYCNGQGECDYCLQKCTCAGGFGSDDEVVERDIARDCSQRACPAGVSWGLVLEGRPRPDPDGS---HTLAECSNKGMCVREYGLCSCDDGFGGRACERYACPNSCSGHGACRSMREMGLMAAAEPLVNTTAVDGVGEGYEVQYGWGVAAGTRSWDSRSVYGCVCESSWTVGLDMGETQQAEYFGADCSLKHCPTGDDPETDDDETDC----SGHMAEGQRGVGSDGNLCHIDCSNRGLCDYSTGVCRCFDGYHGQACNKK 1176
GC N+CNG G C+ + CTC G+G+D ++ A DCS R CPAG +WG V P GS H ECS +G+C R+ G C C DGF G ACER CP+ CS HG C +M+ + + + A PL N T G + T +WD ++GCVC+S W VGL G+TQ+ E+FG DCSL+HCP+GDDP TD DETDC S + G G GNLCH+DCSNRG CDY+TG+C CF GY+G C ++
Sbjct: 24 GCSLFNWCNGHGTCNTGTRTCTCYEGWGADTDLTLYRAA-DCSARVCPAGKAWGDV--------PTGSLSAHQEQECSGRGLCDRDSGECECFDGFTGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNVTTYSGEDD-------------TVTWDEEMIFGCVCDSKWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPSTDVDETDCFNVTSSSVYLGT--AGRAGNLCHVDCSNRGTCDYATGLCECFTGYYGFNCGQQ 264 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6168.13888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6168.13888.1 >prot_H-paniculata_contig6168.13888.1 ID=prot_H-paniculata_contig6168.13888.1|Name=mRNA_H-paniculata_contig6168.13888.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=405bp LQGFTSGEANGIAGPDFALGELVLSSDSNDSWLAGWREGSFVQDQAGFEDback to top mRNA from alignment at H-paniculata_contig6168:2021..12270- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6168.13888.1 ID=mRNA_H-paniculata_contig6168.13888.1|Name=mRNA_H-paniculata_contig6168.13888.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10250bp|location=Sequence derived from alignment at H-paniculata_contig6168:2021..12270- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6168:2021..12270- >mRNA_H-paniculata_contig6168.13888.1 ID=mRNA_H-paniculata_contig6168.13888.1|Name=mRNA_H-paniculata_contig6168.13888.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2430bp|location=Sequence derived from alignment at H-paniculata_contig6168:2021..12270- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |