prot_H-paniculata_contig6166.13885.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6166.13885.1
Unique Nameprot_H-paniculata_contig6166.13885.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length628
Homology
BLAST of mRNA_H-paniculata_contig6166.13885.1 vs. uniprot
Match: A0A6H5KR68_9PHAE (DUF5917 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR68_9PHAE)

HSP 1 Score: 360 bits (924), Expect = 2.950e-107
Identity = 305/692 (44.08%), Postives = 364/692 (52.60%), Query Frame = 0
Query:    2 ITELSTGVEEYGIAVAGIAARVGEDGC-RRQLGPLLDEASTFLIGREGS-WATGDHEKAGQEEESNPDTEEG---------------SPSXXXSSCYDNGSS----------SRVTVRDILLRRVASSSPA-LRVSTLGLVASLAELRYDRVFLDLIAC--SESASPGGVTA------SERAGEGGLLTVTLLEHEDGMCALLEPAGPLEDLRVTRAMVDSFGSAFVGSPIHPNFRRFA--SHVSLERYLVQAHQRQIQQLMMEARVSHSKQPDEDMXXXXXXXXXXXXXXXXQSSGSVRG-VAGGPAVVGRDVEAGEVEAAVRGMSHGDGERS-VDVFDAEGFVRQYGKTLAVSVDAPGSFLHVLFDCLEAIFERTLDENVALTGVLSCLCLAATATEISPVRRLLLVLLFDETKDAPFRSMRRILQKLWISAQARVASLPDAPRLLARARVSLGMAAGDFLGPEDDDEXXXXXXXXXGVKGLRKSKPARTARNDDNSSTVSGQKAERAGDLGGGXXXXXXXXXGHRDDPKKREDIRGGVFFAAEQA--------------------------RFLETYVFLEEFLKELFCALQAKSCVEKDARGLSESHRRGSRVAREG-LSLTGCGLDAGDGAMVEESEEELEKEEAGESCGGGEEGIEKGKEAELMEDLPTSLDEFMRTAEFPTFMSP 626
            +TELS+G E YG+AVAG+AA V E G  RR LGPL+D  STFL+GRE S +++G +          P +                  S S   S     GSS          S V +RD+LLRR+  SSP+ LRVSTL L+ SLAELR D V LDL+    SE  +P   T       SE  G G   +V  L  +DG        G LE LRV+RAMVDSFGSAF GSPIHPNFR F+  SH+SLE YLV A QRQI QLM  AR   S    E   XXXXX             GS  G V    A V    E  E  AA RG + G  +      FDA  FVR++G  LA + DA GSFLH LFDCLEA+FER+L+EN+ +TGVLS LCLAATA E+SPVRRLLL+LLFD T+DAPFRSMRRIL+KLW SAQ RVASLP+A RLLA+AR SLGM A   +G  ++           GV G     PAR  R            ++R   + GG                +  D  GG   A + +                           FL TYVFLEEFLKELFCAL AK+ VE DA+GLSESHR+GS     G LS+ G       GA                            +  E +++LPTSLDE ++ A FPTF+SP
Sbjct:  564 MTELSSGAEGYGVAVAGLAASVQEGGGGRRPLGPLVDTVSTFLVGRELSVFSSGSNNXXXXXXXXVPTSPSRKGCAXXXXXXXPLTKSRSRAGSLSGSGGSSMVLMTSRCSGSIVCLRDVLLRRLEPSSPSQLRVSTLELLGSLAELRDDCVLLDLVLRPGSEPLTPAATTGDQRHPRSEEGGGGQRWSVEAL-LDDGQ-------GALEGLRVSRAMVDSFGSAFGGSPIHPNFRLFSASSHLSLEGYLVAAQQRQIHQLMEGARGGCSS--GEGGKXXXXXAADVDTDMLDMVVGSDGGKVLEAVAAVAATEEGEEGGAASRGCNRGASQGGGFGEFDAAAFVRKHGDNLASAADADGSFLHALFDCLEAVFERSLEENLEVTGVLSSLCLAATAAEVSPVRRLLLLLLFDGTQDAPFRSMRRILEKLWASAQERVASLPNARRLLAQARASLGMPA---IGDSEETADVA------GVTG-----PARRGRQGSRGMREELSNSKRRQQVQGGVDGGGGVGVKRGAGDARSADAPGGEGRATDSSTHSXXXXXXXXXXXXXXXXXPQSSTSHFLGTYVFLEEFLKELFCALSAKNGVESDAQGLSESHRQGSAELHTGMLSVDGEASPKPPGAGRGGERXXXXXXXXXXXXXXXXXXXXXXENEEDIDELPTSLDELLKEAAFPTFVSP 1231          
BLAST of mRNA_H-paniculata_contig6166.13885.1 vs. uniprot
Match: D8LN16_ECTSI (DUF5917 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN16_ECTSI)

HSP 1 Score: 285 bits (730), Expect = 2.710e-81
Identity = 208/431 (48.26%), Postives = 236/431 (54.76%), Query Frame = 0
Query:    2 ITELSTGVEEYGIAVAGIAARVGEDGC-RRQLGPLLDEASTFLIGREGSWATGDHEKAGQEEESNPDTEEGSPSXXXSSCYDNGSSSRVTVRDILLRRVASSSPALRVSTLGLVASLAELRYDRVFLDLIAC--SESASPGGVTA------SERAGEGGLLTVTLLEHEDGMCALLEPAGPLEDLRVTRAMVDSFGSAFVGSPIHPNFRRFA--SHVSLERYLVQAHQRQIQQLMMEARVSHSKQPDEDMXXXXXXXXXXXXXXXXQSSGSVRGVAGGPAVVGRDVEAGEVEAAVRGMSHGDGERS-VDVFDAEGFVRQYGKTLAVSVDAPGSFLHVLFDCLEAIFERTLDENVALTGVLSCLCLAATATEISPVRRLLLVLLFDETKDAPFRSMRRILQKLWISAQARVASLPDAPRLLARARVSLGMAA 420
            + ELS G E YG+AVAG+AA V E G  RR LGPL+D  STFL                                                              LRVSTL L+ SLAELR D V LDL+ C  SE  +P   T       SE+ G G   +V  L  +DG        G LE LRV+RAMVDSFGSAF GSPIHPNFR F+  SH+SLE YLV A QRQI QLM  AR   S    E                    S   + V    A V    E     AA RG S G  E      FDA  FVR++G TLA + DA GSFL  LFDCLEA+FER+L+EN+ +TGVLS LCLAATA E+SPVRRLLL+LLFD T+DAPFRSMRRIL+KLW SAQ RVASLP+APRLLA+AR SLGM A
Sbjct:  537 MAELSAGAEGYGVAVAGLAASVQEGGGGRRPLGPLVDTVSTFL--------------------------------------------------------------LRVSTLELLGSLAELRDDCVLLDLVLCPGSEPLTPAATTGDRRYPRSEKGGGGQRWSVEAL-LDDGQ-------GALEGLRVSRAMVDSFGSAFGGSPIHPNFRLFSASSHLSLEGYLVAAQQRQIHQLMEGARGGCSSGEGERGGGGAAADVDTDMLDMVVGSDGGK-VLEAVAAVAAAEEGXXXGAASRGCSRGASEGGEFGEFDAAAFVREHGDTLASAADADGSFLRALFDCLEAVFERSLEENLEVTGVLSSLCLAATAAEVSPVRRLLLLLLFDGTQDAPFRSMRRILEKLWASAQERVASLPNAPRLLAQARASLGMPA 896          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6166.13885.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KR68_9PHAE2.950e-10744.08DUF5917 domain-containing protein n=1 Tax=Ectocarp... [more]
D8LN16_ECTSI2.710e-8148.26DUF5917 domain-containing protein n=1 Tax=Ectocarp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR21705:SF5coord: 33..539
NoneNo IPR availablePANTHERPTHR21705RAI16 PROTEIN-RELATEDcoord: 33..539

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6166contigH-paniculata_contig6166:2722..6903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6166.13885.1mRNA_H-paniculata_contig6166.13885.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6166 1657..8426 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6166.13885.1 ID=prot_H-paniculata_contig6166.13885.1|Name=mRNA_H-paniculata_contig6166.13885.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=628bp
MITELSTGVEEYGIAVAGIAARVGEDGCRRQLGPLLDEASTFLIGREGSW
ATGDHEKAGQEEESNPDTEEGSPSSSSSSCYDNGSSSRVTVRDILLRRVA
SSSPALRVSTLGLVASLAELRYDRVFLDLIACSESASPGGVTASERAGEG
GLLTVTLLEHEDGMCALLEPAGPLEDLRVTRAMVDSFGSAFVGSPIHPNF
RRFASHVSLERYLVQAHQRQIQQLMMEARVSHSKQPDEDMELETESGVAV
GVNGNGQSSGSVRGVAGGPAVVGRDVEAGEVEAAVRGMSHGDGERSVDVF
DAEGFVRQYGKTLAVSVDAPGSFLHVLFDCLEAIFERTLDENVALTGVLS
CLCLAATATEISPVRRLLLVLLFDETKDAPFRSMRRILQKLWISAQARVA
SLPDAPRLLARARVSLGMAAGDFLGPEDDDEEVEVEGIGVGVKGLRKSKP
ARTARNDDNSSTVSGQKAERAGDLGGGDVAGGEGSGGHRDDPKKREDIRG
GVFFAAEQARFLETYVFLEEFLKELFCALQAKSCVEKDARGLSESHRRGS
RVAREGLSLTGCGLDAGDGAMVEESEEELEKEEAGESCGGGEEGIEKGKE
AELMEDLPTSLDEFMRTAEFPTFMSPA*
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