prot_H-paniculata_contig6165.13884.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6165.13884.1
Unique Nameprot_H-paniculata_contig6165.13884.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length271
Homology
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: D7FX59_ECTSI (SET translocation n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX59_ECTSI)

HSP 1 Score: 204 bits (520), Expect = 3.730e-61
Identity = 118/212 (55.66%), Postives = 143/212 (67.45%), Query Frame = 0
Query:    1 MKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDVGFRISFVFRENPFFSNAELWKEWEAPEGQQVQFSAVEWKHTEEAKELQSCLIWNLDPAAAQEETPSFFSIFCEEIDDDEVGEALRRDIIDNPLDIYMRHDFDA 212
            +KRKRPLY++RQ AI++VPDFWLKV        P++SDGDQLALSYLEAVAV KA+   A                                    E    +LDDDDDVGFR++F FRENPFFSN+ELW+EWE P  ++  FS V WK T+E+++LQSCL+WNLDPA   EETPSFFSIF ++++D E+GEALR DI DNPLDIYMRHDFDA
Sbjct:   68 LKRKRPLYIKRQEAIAQVPDFWLKV--------PYISDGDQLALSYLEAVAVHKATPTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGE--GGKLDDDDDVGFRVTFTFRENPFFSNSELWREWE-PADEKASFSVVNWKDTDESRDLQSCLLWNLDPAL-HEETPSFFSIFGDDMEDYELGEALRGDITDNPLDIYMRHDFDA 267          
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: W7UBP8_9STRA (Protein set isoform 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBP8_9STRA)

HSP 1 Score: 100 bits (248), Expect = 3.340e-21
Identity = 79/212 (37.26%), Postives = 109/212 (51.42%), Query Frame = 0
Query:    4 KRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDVGFRISFVFRENPFFSNAELWKEWEAPEGQQ-VQFSAVEWKHTEEAKELQSCLIWNL---DPAAAQEETPSFFSIFCEEIDDDEVGEALRRDIIDNPLDIYMRHDFD 211
            K+P+Y RRQ AI +VP+FW KVLLAHP     +SD DQ AL +L AV V   +  +              R  ESEG  E+G                 L D     +R++F F  N +F N+ LWKE+     +  V  S V WK T+E+K LQ  L+ +L   DP     + PSFFSIF  E  D E+G+ L+ ++  +P+ IY+  DF+
Sbjct:   85 KKPVYSRRQEAIKQVPEFWFKVLLAHPAIGEHISDPDQGALRHLTAVEVVDVTEERL----------DGAREEESEGGQEQGG-------------GRILPD-----YRVNFYFSPNVYFENSVLWKEFRFRNDEATVSASEVLWKDTQESKGLQETLVPHLLAQDPVPENVQ-PSFFSIFHAEDRDLEMGDVLKEEVWRDPVGIYLSADFE 267          
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A4D9D956_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D956_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 7.970e-16
Identity = 72/202 (35.64%), Postives = 101/202 (50.00%), Query Frame = 0
Query:   14 AISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDVGFRISFVFRENPFFSNAELWKEWEAPEGQQ-VQFSAVEWKHTEEAKELQSCLIWNL---DPAAAQEETPSFFSIFCEEIDDDEVGEALRRDIIDNPLDIYMRHDFD 211
            AI+ VP+FW KVLLAHP     +SD DQ AL +L AV V   +  +              R  ESEG  E+G                 L D     +R++F F  N +F N+ LWKE+     +  V  S V WK T+E++ LQ  L+ +L   DP     + PSFFSIF  E  D E+G+ L+ ++  +P+ IY+  DF+
Sbjct:   55 AIATVPEFWFKVLLAHPAIGEHISDPDQGALRHLTAVEVVDVTEERL----------DGAREEESEGGQEQGG-------------GRILPD-----YRVNFYFSPNVYFENSVLWKEFRFRNDEATVSASEVLWKDTQESEGLQEILVPHLLAQDPVPENVQ-PSFFSIFHAEDRDLEMGDVLKEEVWRDPVGIYLSADFE 227          
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A7S2UXW5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXW5_9STRA)

HSP 1 Score: 69.3 bits (168), Expect = 3.070e-10
Identity = 39/101 (38.61%), Postives = 65/101 (64.36%), Query Frame = 0
Query:  111 FRISFVFRENPFFSNAELWKEWE-APEGQQVQFSAVEWKHTEEAKELQSCLIWNLDPAAAQ----EETPSFFSIFCEEIDDDEVGEALRRDIIDNPLDIYM 206
            F +SF+F ENP+FSN  LWK++  A +  +V    ++WK TEE K +++ L+ NL    A+    ++ PSFFS+F  +  + +VGEA + +I  NP+++Y+
Sbjct:  108 FMLSFIFNENPYFSNDSLWKKFSIANQEVKVTSCEIKWKDTEEGKSIKALLVKNLLNEKAENGDEDKNPSFFSLFDPDEQEYDVGEAFK-EIWPNPMELYL 207          
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A226ES48_FOLCA (Protein SET n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226ES48_FOLCA)

HSP 1 Score: 54.3 bits (129), Expect = 6.140e-5
Identity = 38/106 (35.85%), Postives = 54/106 (50.94%), Query Frame = 0
Query:  110 GFRISFVFRENPFFSNAELWKEWE-APEGQQVQFSAV-EWKHTEEAKELQSCLIWNLDPAAAQEETPSFFSIFCEEIDD--DEVGEALRRDIIDNPLDIYMRHDFD 211
            GFRI F+F ENPFF N EL KE++  P  +    S V +WK   +  + Q  +I          +T  FFS F +  D   D++ E ++ D+  NPL  Y+  D D
Sbjct:  122 GFRIKFIFDENPFFENTELVKEFQLGPNTEPKSTSTVIQWKENMDLSKKQKEIIMQRRKRGLDVKT--FFSWFSDNTDPAADDIAEVIKDDLWPNPLQYYLTPDGD 225          
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A2J8AD51_9CHLO (Protein SET n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AD51_9CHLO)

HSP 1 Score: 53.1 bits (126), Expect = 6.650e-5
Identity = 23/46 (50.00%), Postives = 32/46 (69.57%), Query Frame = 0
Query:    2 KRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYL 47
            K++RP+Y +R   I+KVP FW +VLLAHP+    +SD D   L+YL
Sbjct:   67 KKRRPIYTQRAEIINKVPQFWQRVLLAHPILADHLSDDDNAVLAYL 112          
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A1J1INM7_9DIPT (CLUMA_CG015291, isoform A n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1INM7_9DIPT)

HSP 1 Score: 53.5 bits (127), Expect = 9.310e-5
Identity = 46/123 (37.40%), Postives = 67/123 (54.47%), Query Frame = 0
Query:  103 LDDDDDV--GFRISFVFRENPFFSNAELWKEWE-APEGQQVQ-------FSAVEWKHTEEA-KELQSCLIWNLDPAAAQE---ETPSFFSIFCEEID--DDEVGEALRRDIIDNPLDIYMRHD 209
            ++D DDV  G+RISF F+ENP+F N  L KE+  A E Q           SA++WK  ++  KELQS       P + ++   E  SFF  FC+  D  +D++ E ++ DI  NPL  ++  D
Sbjct:  100 VEDFDDVKTGYRISFHFKENPYFENDVLTKEFHLAAENQSATDFNQTSTSSAIKWKEGKDLLKELQS------KPQSNKKRDMEHKSFFDWFCDNSDPVNDDLAELIKDDIWPNPLQYFLVPD 216          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7FX59_ECTSI3.730e-6155.66SET translocation n=2 Tax=Ectocarpus TaxID=2879 Re... [more]
W7UBP8_9STRA3.340e-2137.26Protein set isoform 2 n=2 Tax=Nannochloropsis gadi... [more]
A0A4D9D956_9STRA7.970e-1635.64Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S2UXW5_9STRA3.070e-1038.61Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A226ES48_FOLCA6.140e-535.85Protein SET n=1 Tax=Folsomia candida TaxID=158441 ... [more]
A0A2J8AD51_9CHLO6.650e-550.00Protein SET n=1 Tax=Tetrabaena socialis TaxID=4779... [more]
A0A1J1INM7_9DIPT9.310e-537.40CLUMA_CG015291, isoform A n=1 Tax=Clunio marinus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.1120.90coord: 97..210
e-value: 2.2E-16
score: 62.0
NoneNo IPR availableGENE3D3.30.1120.90coord: 13..68
e-value: 1.0E-5
score: 27.2
NoneNo IPR availablePANTHERPTHR11875:SF49PROTEIN SETcoord: 3..255
IPR002164Nucleosome assembly protein (NAP)PANTHERPTHR11875TESTIS-SPECIFIC Y-ENCODED PROTEINcoord: 3..255
IPR037231NAP-like superfamilySUPERFAMILY143113NAP-likecoord: 2..217

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6165contigH-paniculata_contig6165:2583..9830 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6165.13884.1mRNA_H-paniculata_contig6165.13884.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6165 1544..9857 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6165.13884.1 ID=prot_H-paniculata_contig6165.13884.1|Name=mRNA_H-paniculata_contig6165.13884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bp
MKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAV
AVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECA
EELDDDDDVGFRISFVFRENPFFSNAELWKEWEAPEGQQVQFSAVEWKHT
EEAKELQSCLIWNLDPAAAQEETPSFFSIFCEEIDDDEVGEALRRDIIDN
PLDIYMRHDFDAEAEEDEAPQAQAQAQAPEDGDYVDDDGIDGDLVYDEDG
DTKDRDVDNGAHDWVDEAGD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002164NAP_family
IPR037231NAP-like_sf