|
|
Homology
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: D7FX59_ECTSI (SET translocation n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX59_ECTSI) HSP 1 Score: 222 bits (565), Expect = 1.070e-63 Identity = 127/221 (57.47%), Postives = 152/221 (68.78%), Query Frame = 1
Query: 1 QVLLVHKAFMKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDVGFRISFVFRENPFFSNAELWKEWEAPEGQQVQFSAVEWKHTEEAKELQSCLIWNLDPAAAQEETPSFFSIFCEEIDDDEVGEALRRDIIDNPLDIYMRHDFDA 663
QVLLVHKAF+KRKRPLY++RQ AI++VPDFWLKV P++SDGDQLALSYLEAVAV KA+ A E +LDDDDDVGFR++F FRENPFFSN+ELW+EWE P ++ FS V WK T+E+++LQSCL+WNLDPA EETPSFFSIF ++++D E+GEALR DI DNPLDIYMRHDFDA
Sbjct: 59 QVLLVHKAFLKRKRPLYIKRQEAIAQVPDFWLKV--------PYISDGDQLALSYLEAVAVHKATPTAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGE--GGKLDDDDDVGFRVTFTFRENPFFSNSELWREWE-PADEKASFSVVNWKDTDESRDLQSCLLWNLDPAL-HEETPSFFSIFGDDMEDYELGEALRGDITDNPLDIYMRHDFDA 267
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: W7UBP8_9STRA (Protein set isoform 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBP8_9STRA) HSP 1 Score: 101 bits (252), Expect = 3.840e-20 Identity = 80/218 (36.70%), Postives = 112/218 (51.38%), Query Frame = 1
Query: 19 KAFMKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDVGFRISFVFRENPFFSNAELWKEWEAPEGQQ-VQFSAVEWKHTEEAKELQSCLIWNL---DPAAAQEETPSFFSIFCEEIDDDEVGEALRRDIIDNPLDIYMRHDFD 660
K + + K+P+Y RRQ AI +VP+FW KVLLAHP +SD DQ AL +L AV V + + R ESEG E+G L D +R++F F N +F N+ LWKE+ + V S V WK T+E+K LQ L+ +L DP + PSFFSIF E D E+G+ L+ ++ +P+ IY+ DF+
Sbjct: 79 KKYKELKKPVYSRRQEAIKQVPEFWFKVLLAHPAIGEHISDPDQGALRHLTAVEVVDVTEERL----------DGAREEESEGGQEQGG-------------GRILPD-----YRVNFYFSPNVYFENSVLWKEFRFRNDEATVSASEVLWKDTQESKGLQETLVPHLLAQDPVPENVQ-PSFFSIFHAEDRDLEMGDVLKEEVWRDPVGIYLSADFE 267
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A4D9D956_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D956_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 1.300e-14 Identity = 72/202 (35.64%), Postives = 101/202 (50.00%), Query Frame = 1
Query: 67 AISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDVGFRISFVFRENPFFSNAELWKEWEAPEGQQ-VQFSAVEWKHTEEAKELQSCLIWNL---DPAAAQEETPSFFSIFCEEIDDDEVGEALRRDIIDNPLDIYMRHDFD 660
AI+ VP+FW KVLLAHP +SD DQ AL +L AV V + + R ESEG E+G L D +R++F F N +F N+ LWKE+ + V S V WK T+E++ LQ L+ +L DP + PSFFSIF E D E+G+ L+ ++ +P+ IY+ DF+
Sbjct: 55 AIATVPEFWFKVLLAHPAIGEHISDPDQGALRHLTAVEVVDVTEERL----------DGAREEESEGGQEQGG-------------GRILPD-----YRVNFYFSPNVYFENSVLWKEFRFRNDEATVSASEVLWKDTQESEGLQEILVPHLLAQDPVPENVQ-PSFFSIFHAEDRDLEMGDVLKEEVWRDPVGIYLSADFE 227
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A7S2UXW5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXW5_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.580e-14 Identity = 61/220 (27.73%), Postives = 104/220 (47.27%), Query Frame = 1
Query: 1 QVLLVHKAFMKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDVGFRISFVFRENPFFSNAELWKEWE-APEGQQVQFSAVEWKHTEEAKELQSCLIWNLDPAAAQ----EETPSFFSIFCEEIDDDEVGEALRRDIIDNPLDIYM 645
++ ++ + K K PLY RQ AIS + FW +V+ HP ++D D+ ++L+ + V ++LD D F +SF+F ENP+FSN LWK++ A + +V ++WK TEE K +++ L+ NL A+ ++ PSFFS+F + + +VGEA + +I NP+++Y+
Sbjct: 40 EIKKINMKYSKLKEPLYEERQKAISGIKGFWFQVMGTHPTIVELIADEDEKVFAHLDMIQV------------------------------------------------KDLDPDT---FMLSFIFNENPYFSNDSLWKKFSIANQEVKVTSCEIKWKDTEEGKSIKALLVKNLLNEKAENGDEDKNPSFFSLFDPDEQEYDVGEAFK-EIWPNPMELYL 207
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A226ES48_FOLCA (Protein SET n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226ES48_FOLCA) HSP 1 Score: 63.5 bits (153), Expect = 2.530e-7 Identity = 55/224 (24.55%), Postives = 93/224 (41.52%), Query Frame = 1
Query: 1 QVLLVHKAFMKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDVGFRISFVFRENPFFSNAELWKEWE-APEGQQVQFSAV-EWKHTEEAKELQSCLIWNLDPAAAQEETPSFFSIFCEEIDD--DEVGEALRRDIIDNPLDIYMRHDFD 660
++L V + K ++P Y +R I ++P+FW+ ++ HP + + ++ L +L + V EE ++ ++ GFRI F+F ENPFF N EL KE++ P + S V +WK + + Q +I +T FFS F + D D++ E ++ D+ NPL Y+ D D
Sbjct: 53 EILQVETKYNKLRKPFYDKRATIIERIPNFWVNAVINHPQISMLIDEEEEDCLHFLNKLEV------------------------------------------------EEFENVEN-GFRIKFIFDENPFFENTELVKEFQLGPNTEPKSTSTVIQWKENMDLSKKQKEIIMQRRKRGLDVKT--FFSWFSDNTDPAADDIAEVIKDDLWPNPLQYYLTPDGD 225
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A2K6TE66_SAIBB (Uncharacterized protein n=2 Tax=Saimiri boliviensis boliviensis TaxID=39432 RepID=A0A2K6TE66_SAIBB) HSP 1 Score: 62.4 bits (150), Expect = 4.960e-7 Identity = 58/222 (26.13%), Postives = 88/222 (39.64%), Query Frame = 1
Query: 1 QVLLVHKAFMKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDVGFRISFVFRENPFFSNAELWKEWEAPEGQQVQFSAVE--WKHTEEAKELQSCLIWNLDPAAAQ---EETPSFFSIFCEEIDD--DEVGEALRRDIIDNPLDIYM 645
++L V + F K ++P +R I+K+P+FW+ + HP + D+ AL YL V V++ +D G+RI F F ENP+F N L KE+ E + E WK K+L C + A+ + EE S F+ F + D DE+GE ++ DI NPL Y+
Sbjct: 75 EILKVEQKFNKLRQPFLQKRSELIAKIPNFWVTTFVNHPRVSALRGEKDKEALHYLTRVKVTEF-------------------------------------------------EDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDTSSKSTEIKWKS---GKDLTKCSSQTQNKASRKRQHEEPESSFTWFADHSDAGADELGEVVKDDIWQNPLQYYL 244
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A1J1INM7_9DIPT (CLUMA_CG015291, isoform A n=1 Tax=Clunio marinus TaxID=568069 RepID=A0A1J1INM7_9DIPT) HSP 1 Score: 62.0 bits (149), Expect = 5.880e-7 Identity = 62/234 (26.50%), Postives = 99/234 (42.31%), Query Frame = 1
Query: 1 QVLLVHKAFMKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDV--GFRISFVFRENPFFSNAELWKEWE-APEGQQVQ-------FSAVEWKHTEEA-KELQSCLIWNLDPAAAQE---ETPSFFSIFCEEID--DDEVGEALRRDIIDNPLDIYMRHD 654
++L + + + K ++P + +R + ISKV FW+ + HP + D ++ L Y+ + V +D DDV G+RISF F+ENP+F N L KE+ A E Q SA++WK ++ KELQS P + ++ E SFF FC+ D +D++ E ++ DI NPL ++ D
Sbjct: 40 EILKIEQKYNKLRKPFFEKRSSIISKVEKFWVTTFINHPRISSILQDQEEDCLHYMTKLHV---------------------------------------------------EDFDDVKTGYRISFHFKENPYFENDVLTKEFHLAAENQSATDFNQTSTSSAIKWKEGKDLLKELQS------KPQSNKKRDMEHKSFFDWFCDNSDPVNDDLAELIKDDIWPNPLQYFLVPD 216
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A1D2M816_ORCCI (Protein SET n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2M816_ORCCI) HSP 1 Score: 63.5 bits (153), Expect = 7.430e-7 Identity = 51/222 (22.97%), Postives = 93/222 (41.89%), Query Frame = 1
Query: 1 QVLLVHKAFMKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDVGFRISFVFRENPFFSNAELWKEWEAPEGQQVQFSA--VEWKHTEEAKELQSCLIWNLDPAAAQEETPSFFSIFCEEIDD--DEVGEALRRDIIDNPLDIYMRHD 654
++L V + K ++P Y +R A I K+P+FW+ ++ HP V + ++ L++L+ + V K + GFR+ F+F ENPFF N EL KE++ + + ++ +EWK + Q +I +++T FFS F + + D++ E ++ D+ NPL ++ D
Sbjct: 29 EILQVETKYNKLRKPFYDKRAAVIEKIPNFWVNAIVNHPQISMLVDEEEEDCLNFLKKLEVQKF----------------------------------------------------ENGFRVKFIFDENPFFDNGELIKEFQLGPNTEPKSTSTIIEWKENMDLSRKQPQIIDANRKRGLEQKT--FFSWFSDNKNPAADDIAEVIKDDLWPNPLKYFVSSD 196
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A383W357_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W357_TETOB) HSP 1 Score: 60.8 bits (146), Expect = 2.840e-6 Identity = 56/231 (24.24%), Postives = 96/231 (41.56%), Query Frame = 1
Query: 1 QVLLVHKAFMKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAVAVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECAEELDDDDDV--GFRISFVFRE-NPFFSNAELWKEWEAPEGQQVQFSA--VEWKHTEEAKELQSCLIWNLDPAAAQEETPSFFSIFCE--------EIDDDEVGEALRRDIIDNPLDIYMRHD 654
+VL V + F KR+RP+Y R A+S++P FW KVL+ HP+ + V++ D L YL V +++D DD+ GFR+ F F + NPFF+N EL KE + + + ++W E +L + + + +S+F E+ D+V +A++ DI +PL + +++
Sbjct: 76 RVLAVEQEFNKRRRPIYQERSYALSRIPGFWKKVLMVHPVIRGVVTESDLDVLDYLLEV---------------------------------------------------DVEDFDDIKSGFRVKFTFADGNPFFTNRELVKELRYADDAALTVTGTDIQWLPGMEPADLAVAAAEQHAGSKRPHSSGNVYSLFAAWFAPQSSLEMGHDDVADAIKDDIWPDPLRWFSQYE 255
BLAST of mRNA_H-paniculata_contig6165.13884.1 vs. uniprot
Match: A0A2J8AD51_9CHLO (Protein SET n=1 Tax=Tetrabaena socialis TaxID=47790 RepID=A0A2J8AD51_9CHLO) HSP 1 Score: 58.5 bits (140), Expect = 3.380e-6 Identity = 26/56 (46.43%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 1 QVLLVHKAFMKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYL 168
+VL V + + K++RP+Y +R I+KVP FW +VLLAHP+ +SD D L+YL
Sbjct: 57 RVLAVEQEYNKKRRPIYTQRAEIINKVPQFWQRVLLAHPILADHLSDDDNAVLAYL 112
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 208.0 |
| Seed ortholog evalue | 5.6e-51 |
| Seed eggNOG ortholog | 2880.D7FX59 |
| Preferred name | HSF5 |
| KEGG rclass | RC00010,RC00074 |
| KEGG ko | ko:K01937,ko:K05621,ko:K06071,ko:K11284,ko:K11285,ko:K11286,ko:K11287,ko:K11288,ko:K11289,ko:K11290,ko:K15413 |
| KEGG Reaction | R00571,R00573 |
| KEGG Pathway | ko00240,ko01100,ko04151,ko05132,ko05168,ko05203,map00240,map01100,map04151,map05132,map05168,map05203 |
| KEGG Module | M00052 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000182,GO:0000228,GO:0000726,GO:0000775,GO:0000785,GO:0000790,GO:0000981,GO:0001558,GO:0001672,GO:0001932,GO:0003158,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003690,GO:0003700,GO:0004857,GO:0004864,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005694,GO:0005730,GO:0005737,GO:0005783,GO:0005811,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006275,GO:0006281,GO:0006302,GO:0006303,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006337,GO:0006355,GO:0006357,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006986,GO:0006996,GO:0007154,GO:0007165,GO:0008047,GO:0008150,GO:0008152,GO:0008156,GO:0008284,GO:0009058,GO:0009059,GO:0009314,GO:0009628,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009966,GO:0009967,GO:0009987,GO:0010033,GO:0010212,GO:0010332,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010563,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010638,GO:0010639,GO:0010646,GO:0010647,GO:0010698,GO:0010847,GO:0010921,GO:0010923,GO:0010941,GO:0012505,GO:0016043,GO:0019208,GO:0019212,GO:0019219,GO:0019220,GO:0019222,GO:0019888,GO:0019899,GO:0022411,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0030154,GO:0030234,GO:0030308,GO:0030855,GO:0030968,GO:0031056,GO:0031057,GO:0031058,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031333,GO:0031396,GO:0031398,GO:0031399,GO:0031400,GO:0031401,GO:0031497,GO:0031498,GO:0031974,GO:0031981,GO:0032268,GO:0032269,GO:0032270,GO:0032502,GO:0032515,GO:0032984,GO:0032986,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034506,GO:0034620,GO:0034622,GO:0034641,GO:0034645,GO:0034728,GO:0034976,GO:0035065,GO:0035066,GO:0035067,GO:0035303,GO:0035304,GO:0035305,GO:0035308,GO:0035966,GO:0035967,GO:0036498,GO:0040008,GO:0042127,GO:0042221,GO:0042325,GO:0042393,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043085,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043487,GO:0043488,GO:0043523,GO:0043524,GO:0043549,GO:0043565,GO:0043666,GO:0043933,GO:0044085,GO:0044087,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045446,GO:0045786,GO:0045798,GO:0045859,GO:0045892,GO:0045893,GO:0045926,GO:0045934,GO:0045935,GO:0045936,GO:0045944,GO:0046483,GO:0046662,GO:0048471,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048856,GO:0048869,GO:0050789,GO:0050790,GO:0050794,GO:0050795,GO:0050896,GO:0051052,GO:0051053,GO:0051128,GO:0051129,GO:0051130,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051239,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051336,GO:0051338,GO:0051346,GO:0051716,GO:0051726,GO:0051896,GO:0051897,GO:0060255,GO:0060429,GO:0060548,GO:0061013,GO:0061638,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070887,GO:0071103,GO:0071214,GO:0071310,GO:0071478,GO:0071479,GO:0071480,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090230,GO:0090304,GO:0097159,GO:0098687,GO:0098772,GO:0104004,GO:0140110,GO:1900049,GO:1900050,GO:1901214,GO:1901215,GO:1901360,GO:1901363,GO:1901576,GO:1901983,GO:1901984,GO:1901985,GO:1902275,GO:1902531,GO:1902533,GO:1902679,GO:1902680,GO:1903097,GO:1903098,GO:1903311,GO:1903320,GO:1903322,GO:1903506,GO:1903507,GO:1903508,GO:1904834,GO:1905268,GO:1905269,GO:1905783,GO:1990837,GO:2000112,GO:2000113,GO:2000241,GO:2000756,GO:2000757,GO:2000758,GO:2001141,GO:2001251,GO:2001252 |
| EggNOG free text desc. | nucleosome assembly |
| EggNOG OGs | KOG1508@1,KOG1508@2759 |
| EC | 2.3.2.13,2.7.11.13,6.3.4.2 |
| COG Functional cat. | T |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01001,ko03036 |
| Exons | 6 |
| Model size | 1879 |
| Cds size | 813 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6165.13884.1 >prot_H-paniculata_contig6165.13884.1 ID=prot_H-paniculata_contig6165.13884.1|Name=mRNA_H-paniculata_contig6165.13884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bp
MKRKRPLYVRRQAAISKVPDFWLKVLLAHPLTQPWVSDGDQLALSYLEAV
AVSKASAGKALVSSATALVSPAQRAPESEGDGEEGVQDRKNGKNSREECA
EELDDDDDVGFRISFVFRENPFFSNAELWKEWEAPEGQQVQFSAVEWKHT
EEAKELQSCLIWNLDPAAAQEETPSFFSIFCEEIDDDEVGEALRRDIIDN
PLDIYMRHDFDAEAEEDEAPQAQAQAQAPEDGDYVDDDGIDGDLVYDEDG
DTKDRDVDNGAHDWVDEAGD* back to topmRNA from alignment at H-paniculata_contig6165:1544..9857- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6165.13884.1 ID=mRNA_H-paniculata_contig6165.13884.1|Name=mRNA_H-paniculata_contig6165.13884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8314bp|location=Sequence derived from alignment at H-paniculata_contig6165:1544..9857- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGGTGCTGCTCGTCCACAAGGCCTTCATGAAGCGCAAGCGGCCACTGTA
CGTGAGGAGACAGGCTGCAATTTCCAAGGTCCCAGATTTCTGGCTGAAGG
TGGTGAGTGGAGCGCATACTTGTCATGAAGCCTGGGAGGAAGGAGCATAG
TAGACGGCATAGCGCTCTCTTGGTCATCCATGTCCATGCTTATCATAAAC
GTTAGCCGTTGAGACACAACCCACGATCTACATCCACCTAGGCTTTGCCA
CCCAGCCACCCGGCCACTCACCCACCCACGCCCGGAGCCTCCCGGCGCAC
CCAGGTTTCGTCATCAACAATACGAAACCAAGCCAACCCAAGCGTTGTCC
AACACCGCAAAAGTAAGGAAGTCGAGGGAATCATAGGGTTGCCGAGAGCA
CGAATCAAAACAGAGAAAATCAAAGACATGTTAAAACACACCCCGCGGAG
TTGTGAGGCTGCAGTATAGACCCGATAGTTGAGGCCACGGGCCGTCGTCC
CACGTTCCATGAAGCCTGGCATTGGTAGGAGCCATAATTTCCCCGAAGAG
TAACGTATGTTATAGGCCTGCCAGCAGCTAACCGTTCTATCCTTAAGGAC
GGTCGTTCCCTCATCTCGTCGAGGGTGGTGATTGCGGCCACCGGTGGGCG
TCCCTATCGGATCGAAATTCATCTGATATACCGCCAGAGTTTGGTCCATT
GACACGGCTATGTGCCCCTGACCCTGGGCGAAGAAGTCCCCGCGCTTGAA
CCCACGCAGCTAGCCGTGGGAATCCCACATCCTGCATCATATGCTCACTC
TTGGTTCGTGATCGCGAGGTACGTGGACAGAGGACGGCGCTGTTGGTCAC
ATGTGCCAATGCACGTGGGGCAACGTCGAGTTTTGTCGAGTGGAAAGTTA
GGTTAGTTTGTATTTTTTACCGTGCAGATCCACAGCATACAGTACCCGAC
ACCATTTAAGAAAGGCCTTATTTGGCGTGAGGCTCACGAGTAGTTTTCTT
GCACCACGTTGAGCTGAATCTCTCAAAGCCAACTTCTTGCCTCTCCAGGC
GCATGTACTTCGTTTTTTTTTTATTTATATATATTCTTCTTATTGTGAAC
CCGTCAGTGATTGACATAAGCCGATGTTCCTTGTCTTGTTTCCTTTTGTG
GTGCCTGTCAACGTGAACCATCCGACACCATGCACACGACAGCTGCACGC
ACAGCGCCCGACAATTGTCACACAGCAGCACGGACTCACAAATCCCCAGC
TTCAAGCTCATTGTGGCGAACAGTAGGAGCCAAAATCCTCTGAAAGCCAC
ATGGCTGGGACGAAGTGCTATACCTACCGTGGGACTGCGCAATGTACAAA
ATATTATATGATCCGCCCAATCTAATATGACTCGCTGTCAAAATGAAGGG
GGTGTTGCGGTCTCTTGGAAGAGGGGGAGGACGAGGAGGAGGCAGGTTTC
TGTGGGTGCATTTCGTATGTGTTTCGCCTCCACACAGTGGCATTGCCTTA
TCGCTCTTACATTTTGAAAAAAATAAATATATATGACAAAAAGAAAAAAG
TTTGTTCCAGGAATCGCAACGCCTAATTACCAGCTACGATAGGTATCAGT
CATGTTGTCGTGTCCCGACTGCCATGACTGCGGGTACCGTTAACCGTAAC
AGGACGCCACACACGCAGCGACTCTCGTTCGCTACGGAAATCGCGGAATA
ATATGCAGGTGCCTACCAGCTCGTGTGTGCCGTAAATGTGATGCTGAATA
CAGCAGTATTGTTTGTATCTTTTGCCGCCGGGCGCGAGCTTACGGCGTCA
TCCTGTTTGTGCTGTGCAGCTGACTGTCAACGCTCGAGGAACCCAATCTG
TGTTCTACAGTCTGTAAGCTGTACCACTTCTACATTAAGTACACGGCGCT
CCGGCTGCTGTGCCAGCCCTTGACGTACGTGAATTTTGTCAGCATTGCCG
ATACCAACTTATACCTAGCGTCGACACCTGATGTTCTACATTCATATAGA
TGACTAAAATTTTAAAGCATCATGTGACATATTGAAAAATATATTCATTT
TTTTTAGAGGATCATGTGACGCTGTTATAATACGAGCAAACGAGGTAAAA
CAAATCACCGTTTTCACCTCAACCATTGCACATCCATGGCCATTTCGCTG
CAGCCGGCCTCGTGTGCGCTTTGTGTGGAGGTAGTGCAGCTGACAAATGA
CGACCGCAGTACACACATTGGCTCGATCGAGCGGTAGCAGCCATCTGGAC
AGCGCAAACAACATGATACAGTCAGCAGGGTTGCGCACGGTGACAAACGA
AACGTATGGGTTACACTAACTACAGTACACTTGGTGTACTTTACTGCAGC
ATCATGTCGGCGCGGTGATACTACGGTAACGGCCACAAGGTGAAGAACAA
AGATAGGTTGGCAGGCACCAACATCTTCCCAAGATTTCCGTAGGGAGCGA
TAGTCGCGGCCTGTGCAGCGTCCTATTATACGTCATGGCACCCAAAGGCA
CAGCAGCAGCCAGCTTATCACAAGTCGTGGCAGTCGGAACATCACAACAT
GACTTGCGATGTAATTGGTTTCGGGCTATGCGTAACAGCTGTGGTGTCGA
CATTTTCATCTCAAAGGCAATTACCCACTGCAGGGAACGGCTAGATGAAT
CAGTTATCGCATCGACATTTGCACCTCACAGCGGTCAGAGATGACAGTGT
TGCGTCATGATCCAGGAGCATGTTAACTTACAAATAGCACAGGGTGCATG
ACACTTCCCAGCCAACCCTCGCGACGAGGGACACAGTATACGTTTGAAAG
AAAATATTTGGTCAGTGCTACTTGGAGGTGTGCACTGGCAGGTTCTACAG
CCAGTGTTAAGTCGGGCACCGACGTCGCGACTGCTGCATTGGCGGCACAT
CGGTTGCACTGTGTGTAGGGCACTGTCGTTCGGCAGCAAGCCACTTCGCT
GGGGGCAGGCAAATATCCTTAAGTAAACAGAAGTCATCACCCAAGATGAC
CCCCAGTTCGAAGAGAGAAGTCATGACTCAATATGGCCTTTACTGTGGGT
TGGCATTTTTTTGTTCCAATATCACTCGACCACGGTTAGGGATCTGCTGT
GCGTTGGCAGGTTGCTCGCCCGGCTTCGCTACGCTCGCGAAGGGGGTACA
GTGTGAATTATCAACCTGAATCTCAACCCAACACTAACCCAAGTCAGCAC
TACCTAACCCAACCCAAAACTCCAAAACCATCATGTGTCTAATGGCAAGG
GTTAAGTGTGCATTGCAAGGTCGCTTACCCGGCTACGCCGATCTCGCGAC
GGAGGGGGGCAGCATGTCTTGCAGATGTGTTCCTAGTATTTGAATCAAAC
ACACACAACTGTGCAAGACCTTGTACTCGCTACATCTTATGTGCGTGCAT
TTCGATCGAGCTTGCCGCGTGTACTAGGCGCGAATATGGTTTCCTCCCTC
CCCGCCCTATTGGAAAATTCAACGTTTGCGTTGACAAATGTTAACCGTCA
CCTCAAAGTTAGCAGCAAAGTAGCCTGGTCGAGCATCACCTGCTACCAAC
AGCAGCACCGTATACTCGTGCGTTTGAACGCGCAAAGCGCAAAATCGATG
AGTTGGCTTTCCGCCCTTTACATACCCACTTGCCCCAAGCCTACAATTGC
GCATCACGAGCAGTATTAACAAGCATAATGATATTTCACTCGCTACCTTG
GCCCCACCACCCTCGCCTTATCACCCCCCCCCCTCCTCCGTGCCCTCCCG
CCCCGTGTGCATACGCGGTCGCTTGTCGTCGCTCTGTCGTGTTTGAGTAG
CTACTGGCGCACCCACTCACGCAGCCATGGGTGTCAGATGGGGATCAGCT
TGCTCTGTCCTACCTCGAAGCGGTGGCTGTCAGCAAAGCCTCAGCGGGAA
AGGCTTTGGTAAGCTCTGCTACTGCTCTGGTAAGCCCTGCGCAACGCGCA
CCGGAAAGCGAGGGAGACGGAGAAGAGGGTGTTCAAGATCGGAAAAATGG
AAAAAACTCGAGGGAAGAGTGTGCGGAAGAGCTGGATGATGACGATGACG
TGGGCTTTCGAATTTCTTTTGTGAGCTGGGAAAAGATAAAGAAGAAAAAG
TGTAATTTTTCATTGTTGGAAAACGGAATCTTTCGTTTTTCTTTTTTTCG
TTGTTTTTTTTTTTTGCGGGGGGGGGGGGGTTATGCTGTTGTTTCCCAAT
GTTTTGAGTTGCTGCTGCTAAAGGTTGAGGTTGCCAATTTTACACAATTT
TTTGAGATGACTGCGACAAGGCTGTGCGGTACGTAATGATCTTCCATTTG
ATTGATTTGCTCTGTACTTGGTTCAACGGGTCAGCTCTCTTTGTCCCTCT
CGGGCATGCCAATCGCACACTTCAGGTGTTCCGAGAAAATCCATTCTTTT
CCAACGCCGAGCTGTGGAAGGAGTGGGAAGCACCGGAAGGGCAGCAGGTA
TGTTCGATAGTAGTGCATTTGGGGTCGCGGATATTTGCAAGCGATGGAAT
TTCGTTATACTTGAGCATCGAAACATCCTCCTTACTCGTGATGGTCGTTT
CGGAACATCTTTTCGTGCAATGTTGCGGAGACGTGATGCTTCCCCCGTGT
GTCTGTTGTTTGCACGTGACCGTCGGTCCTTCGAAGCATTAGCGGTAGGA
GGACACGCACAGAAACAGCGCGAGCTCTGCGACTCTTGAGCCATGACCCC
CAAATTTACACGAGATCTCCCTACTTGTATGTACGTGTGTATGTGTGTGT
GTGTGTGTGTGTGTGTGTGTGGCGTATATACCAACTTAAGCATTTGTTCA
CGATACGGAATTAAAACCGTTCGTGACGGCACGCTTGGGATCAAGAAGTT
CTTGTCACGACACCGATATGAAATATTTATCGACAGCACAAAGCAGGCAG
ATATCTCCCTTGGCCAGAAACCTGCTGTTGAATCCGTGCAGGTTTCTCGG
GTCACCAGAATTCGACCTTCGCACAAATGATGTCAGTGAGAAGTCAATCC
TTCGATTGCTGATTGGTCGATTTCAGGCGCTTTTCCGTCCGGTACATGTC
GATGGGCTGGTTCGTTCAACTTTCTTGGCAAATCTAGGTAGTAATGCCCA
CCGTTTTTGCAGCGACGACTAATGTATCGCGCCTCTCAGCTCACACACAC
GCTCTGTCACACTAGGATCAGTACTGTACACGATACTTGTTGCCGTGCCG
CTTTGCGGCACAGCTAATTGAGCTTACTTGGTGCCCGAAACACGCCTCAG
TATGGCGCCAGCGTGTATCAGAAAACCCCCACTTTGTGCTCGAAACATGA
TTATACAAGAATAATAAAGCTCTCACCCCCCTCCATCCCCGGTCTCTCCC
GGTCCGTCCCCACGCTCTACTGTCGCCTCACCACGGGTACTGTTGGGTGA
ACCAGGTACAGTTTTCGGCGGTGGAGTGGAAACATACCGAGGAGGCCAAG
GAACTACAATCTTGCCTTATCTGGAATCTTGACCCTGCTGCTGCGCAGGA
AGAGACGCCGTCTTTTTTTTCCGTGAGCATTTGTTTTGTACTTTTTGAGG
CAGGGTGGTGTCGAGCAAGGGCAAGGTTGATAGCCAGGGGAGGTCGAATA
GGTTGTCCTCGTAATTTTGGCAAGGTCGGGTTGTCAAGAACTCGGCTGGA
ACATGGCATAGCCCGTAGCGGATCTTGAATTTTATCTCCGAATCCGCATG
TCATATTTGTTGCTGCGTGTGAGTACATTCAACTTGCATGCGTTTTTTTT
TTTTTAACCCCGGAAGGCTAAGGCAAAAACCTTTATCCGATGCTTCCATA
CTTGAGTACTTCTACCGAAGTATTTCTACATTTCCTTTAACAGATGCATG
CATATTGTTGTGACCCTTAGTTTCCTCCCACGTCGATAGTTAGCACGCAC
AAAGCCCACAAGGTTCGTATCCCATCGACATATACTTTCTTATGTGCTAC
GAATTTTGCTCGTCATGATTTTGGAGATACTTGGTCATCGCTGATTTTAA
CTGAATTTTATTACATTTAAATATTTCAGTTTTTTTGGGGGGGTTGGACC
CCCAAAGTTCTTGGTTCAAACAGATAGATCCCTTTGAATACACTGCACAC
ACGCCGCGAAACAACACACTCCTCTGAAATGGTAACGAGGGAAACATACG
TACGGCATGAACGACCTATAGATTTGTTGAGAGTGTACGAATTAGGCACT
GTGTGCTTCGCTGCCGTTCTCATGCAGGTGCTAGAGGGGGCGCGCGGAGT
CTTGCGTGCGCGCACTTTGCCCTGTTAGTATGTTTTTGTTTGGTGTTGTG
GTCGTTGTCGTGGACACTACCTCTTTGCAGTCATATTGGGCTAATGACTG
TTCTAAATCATGAACTCCGCCAGTGGCTTATTTGGGTCGCCCTTGACCGT
TCGCGATTATCATGCTATTCGGTGTTTTATTTTATTTGCATAACTCAGAT
ATTTTGTGAAGAAATTGATGACGACGAAGTGGGGGAGGCTCTTCGCCGGG
ACATCATCGACAATCCCCTAGACATCTACATGAGGGTAGGTTAGGAGTTT
GATTTTTGAGGTGTCGCCCTCTACAAGGACTTCGTTTTTTTTTTTTTTTT
TTTCCGATGCATGCGCTTCCTCCAAAGGCAAGCTTGGCACCGATGTCGCC
GATTTCTGCCTTTGTGGAGATCCCGAATGTGACAAGCGATCAAGAGGTTT
GGTGTTGTGCGGGGCGTGTAGTTGATTCACGAGGTATCGCTTTTACTTGC
GCATTGTACAAACTCCACACGGCGTTTTTGTACGGATAGAAGTCGATATT
ACTCGAATGTCACCGCCGTTGGTACTCGAATTTCACCGTGTTTTTGTAGT
AAAGGCACGTCTTGGAGTGGAGAATGGCGCTATTTCAAAGCACGCCTCCG
CAACCGGGGTCGTGTTGAACATCTAAGGCATTGTGTTGCGCCGGGCAAAC
GTTCATATTTTTAAGAGCCATTTTGAAATATTGCCCTCGGGAATTCTTCT
TCCTTGAAAACAAAATAGGTATTCGTACATGATTTTGCAGAATATTTATT
ATCTCTGTCTTTCATCGACCCTCCCGAAAACAGCACGACTTCGATGCGGA
AGCGGAAGAGGACGAGGCGCCCCAAGCACAAGCGCAGGCACAAGCGCCAG
AAGATGGTGACTACGTGGACGATGACGGGATAGACGGGGATCTTGTCTAC
GATGAAGATGGTGACACTAAGGACCGTGATGTCGACAACGGTGCCCACGA
CTGGGTGGACGAGGCCGGCGACTGACAAAGGGCAGATGTCGAGGAGCACG
AGAGAGGTGGGCGTGGTGCCGCCGCCGCGGCGCGGCGGCGGGAGGGAAAT
GAGACAGGGATAAGCCGTCGGCGCGAAATGAAAAAGTCGAGGGATGGCAA
GATTATCGCTTGGCCCGCAGCGGCGAGATTCATGAGGATCGATGACGATA
ACGTGATCGAATGTTTTGGTGTGGTATATCCCGTTGGTGTTGCAGGTCGC
CCTTTCGCGGGCCGATCCGGTGCGTGCTATGTTGCGGAAACCGCTGTACT
GCATCCGTTACATGAATCTTCACGAGGTGATTCACTCGCCGGTTCCAATT
TCGGGCGGTACCATGATTTCATGGCCTGGTGTAGCATGTGGTAGAATGGT
TGTACTGTACTGCATTGAGAACGTAATGGGTATTCCTTCTTTTATTATTT
GAGAAACGCTTTCGGTAGTTTTTTGTTTGGCTTTCTGTCGTCGGCGCCTC
AGCCCTACAAACCTACCCTGCCTTGAGCTAGCATGGTGTTGTGGTTTTAA
CTTCTGATTTTGATTGTGCACGTTATACGAGCCACGTGGAGTCTGTGATT
TTTTTTTTTCGGTCTGTCGTCGATGCCTTGATGATAGCATGTCAAGTTTG
CAGATAACTCTCTGTGTTGAGCTGTTGTAGCACTGGTCTTTTTTCTCGCT
CGCCGTGAACCCTCTTTGCCGACGTCGAGCACAAGATAACCTTTCTGTAG
AGAGGACTTGACACATTCAGCTAGCACGGCGACGAACTATGGAAAACGAC
GATGGTGATACTACGACGAGCGCGTACTGGTACGAGGAGTAGGTACAATG
TGATGCGTAGCTACCGGGTTTTTTCCTTTCTTTACTGTATTGATCCGCCT
GGCGGTCACGGCGAAAAAATATATGTGCAAATAACAACCGAGTTGATGAT
TTCCTCTCTCTTCCGTCACTAACCGAATAGTTACAGCGCGGCGGATAGGG
CGTGTCTCCTGCGCTCAACAGGATTTTCGTTACTCGATGAAATATAATGG
CAAACACAATGCAC back to topCoding sequence (CDS) from alignment at H-paniculata_contig6165:1544..9857- >mRNA_H-paniculata_contig6165.13884.1 ID=mRNA_H-paniculata_contig6165.13884.1|Name=mRNA_H-paniculata_contig6165.13884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1626bp|location=Sequence derived from alignment at H-paniculata_contig6165:1544..9857- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAGCGCAAGCGGCCACTGTACGTGAGGAGACAGGCTGCAATTTCCAA
GGTCCCAGATTTCTGGCTGAAGGTGATGAAGCGCAAGCGGCCACTGTACG
TGAGGAGACAGGCTGCAATTTCCAAGGTCCCAGATTTCTGGCTGAAGGTG
CTACTGGCGCACCCACTCACGCAGCCATGGGTGTCAGATGGGGATCAGCT
TGCTCTGTCCTACCTCGAAGCGGTGGCTGTCAGCAAAGCCTCAGCGGGAA
AGGCTTTGGTAAGCTCTGCTACTGCTCTGGTAAGCCCTGCGCAACGCGCA
CCGGAAAGCGAGGGAGACGGAGAAGAGGGTGTTCAAGATCGGAAAAATGG
AAAAAACTCGAGGGAAGAGTGTGCGGAAGAGCTGGATGATGACGATGACG
TGGGCTTTCGAATTTCTTTTCTACTGGCGCACCCACTCACGCAGCCATGG
GTGTCAGATGGGGATCAGCTTGCTCTGTCCTACCTCGAAGCGGTGGCTGT
CAGCAAAGCCTCAGCGGGAAAGGCTTTGGTAAGCTCTGCTACTGCTCTGG
TAAGCCCTGCGCAACGCGCACCGGAAAGCGAGGGAGACGGAGAAGAGGGT
GTTCAAGATCGGAAAAATGGAAAAAACTCGAGGGAAGAGTGTGCGGAAGA
GCTGGATGATGACGATGACGTGGGCTTTCGAATTTCTTTTGTGTTCCGAG
AAAATCCATTCTTTTCCAACGCCGAGCTGTGGAAGGAGTGGGAAGCACCG
GAAGGGCAGCAGGTGTTCCGAGAAAATCCATTCTTTTCCAACGCCGAGCT
GTGGAAGGAGTGGGAAGCACCGGAAGGGCAGCAGGTACAGTTTTCGGCGG
TGGAGTGGAAACATACCGAGGAGGCCAAGGAACTACAATCTTGCCTTATC
TGGAATCTTGACCCTGCTGCTGCGCAGGAAGAGACGCCGTCTTTTTTTTC
CGTACAGTTTTCGGCGGTGGAGTGGAAACATACCGAGGAGGCCAAGGAAC
TACAATCTTGCCTTATCTGGAATCTTGACCCTGCTGCTGCGCAGGAAGAG
ACGCCGTCTTTTTTTTCCATATTTTGTGAAGAAATTGATGACGACGAAGT
GGGGGAGGCTCTTCGCCGGGACATCATCGACAATCCCCTAGACATCTACA
TGAGGATATTTTGTGAAGAAATTGATGACGACGAAGTGGGGGAGGCTCTT
CGCCGGGACATCATCGACAATCCCCTAGACATCTACATGAGGCACGACTT
CGATGCGGAAGCGGAAGAGGACGAGGCGCCCCAAGCACAAGCGCAGGCAC
AAGCGCCAGAAGATGGTGACTACGTGGACGATGACGGGATAGACGGGGAT
CTTGTCTACGATGAAGATGGTGACACTAAGGACCGTGATGTCGACAACGG
TGCCCACGACTGGGTGGACGAGGCCGGCGACTGACACGACTTCGATGCGG
AAGCGGAAGAGGACGAGGCGCCCCAAGCACAAGCGCAGGCACAAGCGCCA
GAAGATGGTGACTACGTGGACGATGACGGGATAGACGGGGATCTTGTCTA
CGATGAAGATGGTGACACTAAGGACCGTGATGTCGACAACGGTGCCCACG
ACTGGGTGGACGAGGCCGGCGACTGA back to top
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