mRNA_H-paniculata_contig61607.13879.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig61607.13879.1
Unique NamemRNA_H-paniculata_contig61607.13879.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Match: A0A6G6D7G4_ECTSI (Protein translocase subunit SecA n=8 Tax=Ectocarpales TaxID=2877 RepID=A0A6G6D7G4_ECTSI)

HSP 1 Score: 571 bits (1471), Expect = 9.350e-197
Identity = 291/303 (96.04%), Postives = 296/303 (97.69%), Query Frame = 1
Query:    1 LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFINNLY 909
            LLNV ++Y+ Q PWIPYILNSLKA HLFFRDIHYI +NNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKEN+QMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKI STGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLI YLQKNLDILLTVFEISNKKLNLLENFINNLY
Sbjct:  269 LLNVEDLYSIQDPWIPYILNSLKACHLFFRDIHYILKNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENLQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKINSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLISYLQKNLDILLTVFEISNKKLNLLENFINNLY 571          
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Match: A0A6B7EYR5_9PHAE (Protein translocase subunit SecA n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EYR5_9PHAE)

HSP 1 Score: 542 bits (1396), Expect = 2.030e-185
Identity = 268/303 (88.45%), Postives = 290/303 (95.71%), Query Frame = 1
Query:    1 LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFINNLY 909
            LLNV ++YN Q PWIPYILNSLKARHLFFRDIHYI RNNEV+IIDEFTGRIMEGRKWGDGLHQAIEAKENIQ+LKGSET ASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVS LPTY+K+KR+D+SD IF+DEISKWRA+AQECLK+YSTGRPVLVGTTTIQNSEVIS LLKTY+VPH+LLNAKPEN++RESQI+AQAGCLNSITIATNMAGRGTDILLGGNPEFKALS TRFIL+KLIQ+E+FFVPGINL+RLKKALKKNP LI YL+KNLDILLTVF+ISNKKLNLLE FIN LY
Sbjct:  271 LLNVDDLYNVQDPWIPYILNSLKARHLFFRDIHYILRNNEVIIIDEFTGRIMEGRKWGDGLHQAIEAKENIQILKGSETFASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSVLPTYQKIKRKDESDLIFVDEISKWRAVAQECLKMYSTGRPVLVGTTTIQNSEVISHLLKTYNVPHELLNAKPENVKRESQIIAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSFTRFILEKLIQEEEFFVPGINLVRLKKALKKNPKLILYLKKNLDILLTVFDISNKKLNLLETFINELY 573          
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Match: A0A8F0FAQ3_9PHAE (Protein translocase subunit SecA n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAQ3_9PHAE)

HSP 1 Score: 530 bits (1364), Expect = 1.310e-180
Identity = 260/303 (85.81%), Postives = 287/303 (94.72%), Query Frame = 1
Query:    1 LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFINNLY 909
            LL V NIY+ + PWIPYILNSLKAR+LFFRD+HYI ++N ++I+DEFTGRIMEGRKWGDGLHQAIEAKENIQ+LKGSETLASITYQNFFRLYPKISGMTGTAKTEELEF+NIYNLSVS LPTYEKMKR DDSDFIFIDEI+KWRAIAQECLK+YSTGRPVLVGTTTIQNSE++SQLL TY+VPHQLLNAKPENI++ESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKA+ STRFIL+KLI+KE+FFVPGI+LI LKKALKKNP LIPYLQKNLD +LT+F +SNKKLN+LE FI NLY
Sbjct:  269 LLKVDNIYSIEDPWIPYILNSLKARYLFFRDVHYILKDNNIIIVDEFTGRIMEGRKWGDGLHQAIEAKENIQVLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFKNIYNLSVSVLPTYEKMKRSDDSDFIFIDEINKWRAIAQECLKMYSTGRPVLVGTTTIQNSEILSQLLSTYNVPHQLLNAKPENIKKESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKAVESTRFILQKLIEKENFFVPGIDLISLKKALKKNPKLIPYLQKNLDTVLTIFYVSNKKLNVLETFIYNLY 571          
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Match: A0A8F0F7N8_9PHAE (Protein translocase subunit SecA n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7N8_9PHAE)

HSP 1 Score: 523 bits (1346), Expect = 6.710e-178
Identity = 256/303 (84.49%), Postives = 286/303 (94.39%), Query Frame = 1
Query:    1 LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFINNLY 909
            LLN  ++Y+ Q PWIPYILNSLKAR+LFFRDIHYI ++N++VIIDEFTGRIMEGRKWGDGLHQAIEAKENIQ LKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIY+L VS LPTYEKMKRQDDSDFIFIDEISKWRAIAQECLK+YSTGRPVLVGTTTIQNSE++SQLLKTYSVPHQLLNAKPEN+RRE++IVAQAGCLNSITIATNMAGRGTDILLGGNPEFKA+ STRFILKKLI+K+DFF+PG+NL+ LK+AL KNP L+ YLQ++L+ LL+ F++SNKKLNLLE FI NL+
Sbjct:  269 LLNANDLYSIQDPWIPYILNSLKARYLFFRDIHYILKDNQIVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQALKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYDLPVSVLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKMYSTGRPVLVGTTTIQNSEILSQLLKTYSVPHQLLNAKPENVRREAKIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKAVESTRFILKKLIEKKDFFIPGVNLVSLKRALNKNPKLVIYLQQHLETLLSAFDVSNKKLNLLEEFIFNLH 571          
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Match: A0A2R4QPU1_9PHAE (Protein translocase subunit SecA n=3 Tax=Fucaceae TaxID=3010 RepID=A0A2R4QPU1_9PHAE)

HSP 1 Score: 519 bits (1337), Expect = 1.520e-176
Identity = 258/303 (85.15%), Postives = 283/303 (93.40%), Query Frame = 1
Query:    1 LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFINNLY 909
            LLNV NIY+ Q PWIPYILNSLKAR+LFFRDIHYI +NN++VIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVS LPTY+KMKR D SDFIFIDEISKWRAIAQECLK+YS G+PVLVGTTTIQNSEV+SQLL+TY++PHQLLNAKPENI++E++IVAQAGCLNSITIATNMAGRGTDILLGGNPE+KA+  TRFILKKLI+K++FF+  INLI LK ALKKNP LI YLQ NLD LLT+FEISNK+ NLLE+ INNLY
Sbjct:  269 LLNVDNIYSIQDPWIPYILNSLKARYLFFRDIHYILKNNQIVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSILPTYKKMKRHDKSDFIFIDEISKWRAIAQECLKMYSIGQPVLVGTTTIQNSEVLSQLLQTYNIPHQLLNAKPENIQKEAKIVAQAGCLNSITIATNMAGRGTDILLGGNPEYKAIECTRFILKKLIEKDNFFIVDINLISLKLALKKNPKLITYLQNNLDTLLTIFEISNKRFNLLESLINNLY 571          
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Match: A0A0S0GC47_COSCS (Protein translocase subunit SecA n=27 Tax=Laminariales TaxID=2886 RepID=A0A0S0GC47_COSCS)

HSP 1 Score: 509 bits (1312), Expect = 8.780e-173
Identity = 253/303 (83.50%), Postives = 282/303 (93.07%), Query Frame = 1
Query:    1 LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFINNLY 909
            LL V N+Y+ Q PWIPYILNSLKAR+LFFRDIHYI ++N++VIIDEFTGRIMEGRKWGDGLHQ+IEAKENIQ L+GSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIY+L VS LPTYEKMKR+DDSDFIFIDEISKWRAIAQECLK+YSTGRPVLVGTTTIQNSE++SQLL TY+VPHQLLNAKPEN+ RES+IVAQAGCLNSITIATNMAGRGTDILLGGNPEFKAL STRFILK+L+ K+ FFVPGI+L +LK+ALKK+P L+ YLQKNLD LL   E+S+K+LNLLENFI NL+
Sbjct:  269 LLKVDNLYSIQDPWIPYILNSLKARYLFFRDIHYILKDNQIVIIDEFTGRIMEGRKWGDGLHQSIEAKENIQNLRGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYDLPVSILPTYEKMKRKDDSDFIFIDEISKWRAIAQECLKMYSTGRPVLVGTTTIQNSEILSQLLNTYNVPHQLLNAKPENVSRESKIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALESTRFILKRLLGKKKFFVPGIDLRKLKRALKKSPKLVTYLQKNLDTLLASLEVSSKQLNLLENFIFNLH 571          
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Match: A0A0Y0JEU4_9PHAE (Protein translocase subunit SecA n=15 Tax=Sargassaceae TaxID=3014 RepID=A0A0Y0JEU4_9PHAE)

HSP 1 Score: 503 bits (1296), Expect = 2.240e-170
Identity = 247/303 (81.52%), Postives = 281/303 (92.74%), Query Frame = 1
Query:    1 LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFINNLY 909
            LL V N+Y+ Q PWIPYILNSLKAR+LFFRDIHYI + N+++IIDEFTGRIMEGRKWGDGLHQAIEAKENIQ+LKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSV  LPTY+KM R+D  DFIFIDEISKWRAIA+ECL++YS G+PVLVGTTTIQNSE++SQLL+TY++PHQLLNAKPENI++E++IVAQAGCLNSITIATNMAGRGTDILLGGNPE+KA+  TRFILKKLI+K++FFVPGINL+ LK+ALKKNP LI YLQ NLD LLT+F+IS K+LN+LE FI NLY
Sbjct:  269 LLKVDNLYSIQDPWIPYILNSLKARYLFFRDIHYILKANQIIIIDEFTGRIMEGRKWGDGLHQAIEAKENIQILKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVFILPTYKKMIRKDKHDFIFIDEISKWRAIAKECLEMYSIGQPVLVGTTTIQNSEILSQLLQTYNIPHQLLNAKPENIKKEAKIVAQAGCLNSITIATNMAGRGTDILLGGNPEYKAIEYTRFILKKLIEKDNFFVPGINLLSLKRALKKNPKLITYLQNNLDTLLTIFDISTKRLNVLEKFIFNLY 571          
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Match: A0A8F0F9Y4_9PHAE (Protein translocase subunit SecA n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0F9Y4_9PHAE)

HSP 1 Score: 489 bits (1258), Expect = 1.150e-164
Identity = 245/302 (81.13%), Postives = 270/302 (89.40%), Query Frame = 1
Query:    1 LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFINNL 906
            LL V + Y+ Q PWIPYILN+LKAR+LFF DIHYI +  ++VIIDEFTGRIMEGRKWGDGLHQAIEAKENIQ+L GSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIY+L VS LPTYEKMKRQDD DFIFIDEISKWRAIAQECLK+YSTGRPVLVGTTTIQNSE++SQLL TYSVPHQLLNAKPEN+R+ES IV+QAGCLNSITIATNMAGRGTDILLGGNPEFKA  STRFIL KLI K+ FF+PGINLI+LK+ALKKNP L   LQKNL  LLTV ++ ++KLN+ +  I NL
Sbjct:  269 LLKVDDPYSIQDPWIPYILNALKARYLFFCDIHYIIKGKDIVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQVLTGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYDLPVSVLPTYEKMKRQDDLDFIFIDEISKWRAIAQECLKMYSTGRPVLVGTTTIQNSEILSQLLVTYSVPHQLLNAKPENVRKESWIVSQAGCLNSITIATNMAGRGTDILLGGNPEFKAAESTRFILNKLIGKDKFFIPGINLIKLKRALKKNPKLFVDLQKNLSTLLTVLDVGDRKLNMFDKLIFNL 570          
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Match: A0A8F0F730_9PHAE (Protein translocase subunit SecA n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F730_9PHAE)

HSP 1 Score: 476 bits (1226), Expect = 7.570e-160
Identity = 232/304 (76.32%), Postives = 269/304 (88.49%), Query Frame = 1
Query:    1 LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKED-FFVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFINNLY 909
            LL V N+Y+ Q PWIPY+LN+LKA++LFF+D+HYI +   +VIIDEFTGR+MEGRKWGDGLHQAIEAKENIQ+LKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIY L+VS LPTYEKMKRQD  D IFIDEI KWRAIA+ECLK+Y  GRPVLVGTTTIQNSE++SQLL TY++PHQLLNAKPENI++E+ ++AQAGCL SITIATNMAGRGTDILLGGNPEFKAL STR IL+ LI  +D FFV G+NL RLK+ L+KNP L+ YLQ +L+  LTVF +SNKKLN+LE FI++L+
Sbjct:  269 LLKVNNLYSIQDPWIPYVLNALKAQYLFFKDVHYILKKKVIVIIDEFTGRVMEGRKWGDGLHQAIEAKENIQILKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYGLAVSVLPTYEKMKRQDQRDLIFIDEIGKWRAIAKECLKMYEIGRPVLVGTTTIQNSEILSQLLSTYNIPHQLLNAKPENIKKEAAVIAQAGCLKSITIATNMAGRGTDILLGGNPEFKALESTRIILQNLIDDKDHFFVSGVNLTRLKQTLRKNPKLLTYLQTDLNTFLTVFSVSNKKLNILETFISDLH 572          
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Match: A0A2I4Q2B7_9PHAE (Protein translocase subunit SecA n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2B7_9PHAE)

HSP 1 Score: 476 bits (1224), Expect = 1.470e-159
Identity = 227/303 (74.92%), Postives = 270/303 (89.11%), Query Frame = 1
Query:    1 LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGRIMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTGTAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQECLKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQIVAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDFFVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFINNLY 909
            LLNV ++YN   PWIPYILNSL+A+HLFFRD+HYI +NN+VVIIDEFTGRI+EGRKW DGLHQAIE KEN+ MLKGSET+ASITYQNFFRLYPKISGMTGTAKTEELEFENIY LSVS LPTYE+M R+D+SDFIFIDEI+KWR+IAQECLK+YS G+P+LVGTTTIQNSE++S LL TY++PHQLLNAKPENI+RES+I++QAGCL +ITIATNMAGRGTDILLGGNP+FKAL +TR+IL+ L++ + F++ GINL +LK  L++NP LI Y Q+ LD LL VF  S K LNL+ENFI++LY
Sbjct:  269 LLNVIDLYNVNDPWIPYILNSLRAKHLFFRDVHYILKNNKVVIIDEFTGRILEGRKWSDGLHQAIEVKENVPMLKGSETMASITYQNFFRLYPKISGMTGTAKTEELEFENIYGLSVSVLPTYEEMSRKDESDFIFIDEITKWRSIAQECLKVYSKGQPILVGTTTIQNSEILSHLLNTYNLPHQLLNAKPENIKRESEIISQAGCLRAITIATNMAGRGTDILLGGNPDFKALKATRYILQALVKNDTFYIQGINLKKLKYNLRQNPRLITYFQEELDTLLAVFYTSKKNLNLVENFISDLY 571          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61607.13879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G6D7G4_ECTSI9.350e-19796.04Protein translocase subunit SecA n=8 Tax=Ectocarpa... [more]
A0A6B7EYR5_9PHAE2.030e-18588.45Protein translocase subunit SecA n=1 Tax=Cladosiph... [more]
A0A8F0FAQ3_9PHAE1.310e-18085.81Protein translocase subunit SecA n=1 Tax=Desmarest... [more]
A0A8F0F7N8_9PHAE6.710e-17884.49Protein translocase subunit SecA n=2 Tax=Laminaria... [more]
A0A2R4QPU1_9PHAE1.520e-17685.15Protein translocase subunit SecA n=3 Tax=Fucaceae ... [more]
A0A0S0GC47_COSCS8.780e-17383.50Protein translocase subunit SecA n=27 Tax=Laminari... [more]
A0A0Y0JEU4_9PHAE2.240e-17081.52Protein translocase subunit SecA n=15 Tax=Sargassa... [more]
A0A8F0F9Y4_9PHAE1.150e-16481.13Protein translocase subunit SecA n=1 Tax=Chorda as... [more]
A0A8F0F730_9PHAE7.570e-16076.32Protein translocase subunit SecA n=1 Tax=Protohalo... [more]
A0A2I4Q2B7_9PHAE1.470e-15974.92Protein translocase subunit SecA n=1 Tax=Dictyopte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61607contigH-paniculata_contig61607:1..909 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score582.4
Seed ortholog evalue1.2e-163
Seed eggNOG ortholog2880.D1J779
Preferred namesecA
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ATPase-coupled protein transmembrane transporter activity
EggNOG OGs2QS7I@2759,COG0653@1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons1
Model size909
Cds size909
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930695.303314-CDS-H-paniculata_contig61607:0..9091622930695.303314-CDS-H-paniculata_contig61607:0..909Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig61607 1..909 -
1691481410.0400743-CDS-H-paniculata_contig61607:0..9091691481410.0400743-CDS-H-paniculata_contig61607:0..909Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig61607 1..909 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61607.13879.1prot_H-paniculata_contig61607.13879.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig61607 1..909 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig61607.13879.1

>prot_H-paniculata_contig61607.13879.1 ID=prot_H-paniculata_contig61607.13879.1|Name=mRNA_H-paniculata_contig61607.13879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=303bp
LLNVYNIYNTQHPWIPYILNSLKARHLFFRDIHYIFRNNEVVIIDEFTGR
IMEGRKWGDGLHQAIEAKENIQMLKGSETLASITYQNFFRLYPKISGMTG
TAKTEELEFENIYNLSVSTLPTYEKMKRQDDSDFIFIDEISKWRAIAQEC
LKIYSTGRPVLVGTTTIQNSEVISQLLKTYSVPHQLLNAKPENIRRESQI
VAQAGCLNSITIATNMAGRGTDILLGGNPEFKALSSTRFILKKLIQKEDF
FVPGINLIRLKKALKKNPNLIPYLQKNLDILLTVFEISNKKLNLLENFIN
NLY
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mRNA from alignment at H-paniculata_contig61607:1..909-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig61607.13879.1 ID=mRNA_H-paniculata_contig61607.13879.1|Name=mRNA_H-paniculata_contig61607.13879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=909bp|location=Sequence derived from alignment at H-paniculata_contig61607:1..909- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTATTAAATGTATATAATATATATAATACGCAACACCCATGGATTCCTTA TATTTTAAATTCATTAAAAGCGAGACACCTTTTTTTCCGTGATATTCATT ATATTTTCAGAAATAATGAAGTTGTCATTATTGATGAATTTACTGGCCGT ATCATGGAGGGTAGAAAATGGGGTGATGGTTTACATCAAGCTATTGAAGC TAAAGAAAATATCCAAATGTTAAAAGGCAGTGAAACATTAGCTTCTATAA CCTATCAAAACTTTTTTCGACTTTACCCAAAAATATCAGGCATGACTGGT ACAGCTAAAACTGAAGAATTAGAATTTGAAAACATTTATAATTTATCTGT TTCTACCTTACCAACTTATGAAAAAATGAAACGCCAAGATGATTCTGATT TTATTTTTATTGACGAAATAAGTAAATGGCGAGCTATTGCACAAGAATGT CTAAAAATATATTCGACGGGTAGACCTGTTTTAGTAGGGACAACAACAAT CCAAAATTCAGAAGTAATTTCTCAGTTACTAAAAACTTATAGTGTTCCTC ATCAATTATTAAACGCGAAACCAGAAAATATAAGAAGGGAATCACAAATT GTAGCGCAAGCAGGTTGTTTAAACTCAATTACTATTGCCACAAATATGGC AGGTCGAGGTACAGATATTTTATTAGGTGGTAATCCTGAATTTAAGGCAT TATCTTCTACTCGTTTTATACTAAAAAAATTAATTCAGAAAGAGGACTTT TTTGTCCCAGGCATTAATTTAATACGTTTAAAAAAAGCTTTAAAAAAAAA TCCAAACTTGATTCCATATCTACAAAAAAATTTGGATATCCTTTTAACGG TCTTTGAGATTTCAAATAAAAAATTAAACCTACTAGAAAATTTTATCAAT AATTTATAT
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Coding sequence (CDS) from alignment at H-paniculata_contig61607:1..909-

>mRNA_H-paniculata_contig61607.13879.1 ID=mRNA_H-paniculata_contig61607.13879.1|Name=mRNA_H-paniculata_contig61607.13879.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1818bp|location=Sequence derived from alignment at H-paniculata_contig61607:1..909- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTATTAAATGTATATAATATATATAATACGCAACACCCATGGATTCCTTA
TATTTTAAATTCATTAAAAGCGAGACACCTTTTTTTCCGTGATATTCATT
ATATTTTCAGAAATAATGAAGTTGTCATTATTGATGAATTTACTGGCCGT
ATCATGGAGGGTAGAAAATGGGGTGATGGTTTACATCAAGCTATTGAAGC
TAAAGAAAATATCCAAATGTTAAAAGGCAGTGAAACATTAGCTTCTATAA
CCTATCAAAACTTTTTTCGACTTTACCCAAAAATATCAGGCATGACTGGT
ACAGCTAAAACTGAAGAATTAGAATTTGAAAACATTTATAATTTATCTGT
TTCTACCTTACCAACTTATGAAAAAATGAAACGCCAAGATGATTCTGATT
TTATTTTTATTGACGAAATAAGTAAATGGCGAGCTATTGCACAAGAATGT
CTAAAAATATATTCGACGGGTAGACCTGTTTTAGTAGGGACAACAACAAT
CCAAAATTCAGAAGTAATTTCTCAGTTACTAAAAACTTATAGTGTTCCTC
ATCAATTATTAAACGCGAAACCAGAAAATATAAGAAGGGAATCACAAATT
GTAGCGCAAGCAGGTTGTTTAAACTCAATTACTATTGCCACAAATATGGC
AGGTCGAGGTACAGATATTTTATTAGGTGGTAATCCTGAATTTAAGGCAT
TATCTTCTACTCGTTTTATACTAAAAAAATTAATTCAGAAAGAGGACTTT
TTTGTCCCAGGCATTAATTTAATACGTTTAAAAAAAGCTTTAAAAAAAAA
TCCAAACTTGATTCCATATCTACAAAAAAATTTGGATATCCTTTTAACGG
TCTTTGAGATTTCAAATAAAAAATTAAACCTACTAGAAAATTTTATCAAT
AATTTATATTTATTAAATGTATATAATATATATAATACGCAACACCCATG
GATTCCTTATATTTTAAATTCATTAAAAGCGAGACACCTTTTTTTCCGTG
ATATTCATTATATTTTCAGAAATAATGAAGTTGTCATTATTGATGAATTT
ACTGGCCGTATCATGGAGGGTAGAAAATGGGGTGATGGTTTACATCAAGC
TATTGAAGCTAAAGAAAATATCCAAATGTTAAAAGGCAGTGAAACATTAG
CTTCTATAACCTATCAAAACTTTTTTCGACTTTACCCAAAAATATCAGGC
ATGACTGGTACAGCTAAAACTGAAGAATTAGAATTTGAAAACATTTATAA
TTTATCTGTTTCTACCTTACCAACTTATGAAAAAATGAAACGCCAAGATG
ATTCTGATTTTATTTTTATTGACGAAATAAGTAAATGGCGAGCTATTGCA
CAAGAATGTCTAAAAATATATTCGACGGGTAGACCTGTTTTAGTAGGGAC
AACAACAATCCAAAATTCAGAAGTAATTTCTCAGTTACTAAAAACTTATA
GTGTTCCTCATCAATTATTAAACGCGAAACCAGAAAATATAAGAAGGGAA
TCACAAATTGTAGCGCAAGCAGGTTGTTTAAACTCAATTACTATTGCCAC
AAATATGGCAGGTCGAGGTACAGATATTTTATTAGGTGGTAATCCTGAAT
TTAAGGCATTATCTTCTACTCGTTTTATACTAAAAAAATTAATTCAGAAA
GAGGACTTTTTTGTCCCAGGCATTAATTTAATACGTTTAAAAAAAGCTTT
AAAAAAAAATCCAAACTTGATTCCATATCTACAAAAAAATTTGGATATCC
TTTTAACGGTCTTTGAGATTTCAAATAAAAAATTAAACCTACTAGAAAAT
TTTATCAATAATTTATAT
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