mRNA_H-paniculata_contig12190.1388.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
Overview
Homology
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Match: D7FK47_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK47_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 9.770e-23 Identity = 54/126 (42.86%), Postives = 77/126 (61.11%), Query Frame = 1 Query: 10 QDTSHRFCGIQETFRYNIAKVPNRQRVQVIKGDSMLSLSALIASGHSSAFDVVYVDASHQARDLELLMEGLLHLADVLADGILAFRLLKVGGKIIFDDEVMFPDDVAVATATLERAFAGEMKIVHR 387 ++T ++E F +N+ K PN +RV KGDS+ SL+ L+ASG +S+FDVVYVDASH+ +D L D +L+FRLLKVGG +IFDD M VA AT+ E A ++++H+ Sbjct: 104 ENTGFDMVSVEERFHWNMGKAPNGERVVAFKGDSLESLAGLVASGLTSSFDVVYVDASHEMKD-------------TLGDALLSFRLLKVGGVMIFDDFWM--KGVARATSAFEEALWDSLQVLHK 214
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Match: D7FK29_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK29_ECTSI) HSP 1 Score: 89.0 bits (219), Expect = 7.650e-19 Identity = 50/126 (39.68%), Postives = 75/126 (59.52%), Query Frame = 1 Query: 10 QDTSHRFCGIQETFRYNIAKVPNRQRVQVIKGDSMLSLSALIASGHSSAFDVVYVDASHQARDLELLMEGLLHLADVLADGILAFRLLKVGGKIIFDDEVMFPDDVAVATATLERAFAGEMKIVHR 387 +++ + I++ FR N+A+VPN RV KG S+ SL+ ++ASG S FD V++D SH+ ++ VL D +L+FR+LKVGG +IFDD M VA ATA E A ++++HR Sbjct: 128 ENSGYEMAAIEDRFRSNMARVPNGDRVVAFKGTSLESLANILASGLDSRFDAVFLDGSHEMKN-------------VLRDALLSFRMLKVGGVMIFDDYWM--RGVAHATAAFEEALGDYLEVLHR 238
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Match: A0A6H5JQS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS8_9PHAE) HSP 1 Score: 86.7 bits (213), Expect = 1.520e-18 Identity = 49/125 (39.20%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 10 QDTSHRFCGIQETFRYNIAKVPNRQRVQVIKGDSMLSLSALIASGHSSAFDVVYVDASHQARDLELLMEGLLHLADVLADGILAFRLLKVGGKIIFDDEVMFPDDVAVATATLERAFAGEMKIVH 384 +++ + I++ FR N+A++PN RV KG S+ SL+ ++ASG S FD V +D SH+ D VL D +L+FR+LKVGG +IFDD M VA ATA E A ++++H Sbjct: 51 ENSGYDMAAIEDRFRSNMARIPNGDRVVAFKGSSLESLANILASGLDSRFDAVLLDGSHEMND-------------VLGDALLSFRMLKVGGVMIFDDYWM--RGVAQATAAFEEALGDYLEVLH 160
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Match: A0A1G5IZ77_9HYPH (Methyltransferase domain-containing protein n=1 Tax=Microvirga guangxiensis TaxID=549386 RepID=A0A1G5IZ77_9HYPH) HSP 1 Score: 73.2 bits (178), Expect = 2.480e-13 Identity = 41/83 (49.40%), Postives = 50/83 (60.24%), Query Frame = 1 Query: 73 PNRQRVQVIKGDSMLSLSALIASGHSSAFDVVYVDASHQARDLELLMEGLLHLADVLADGILAFRLLKVGGKIIFDDEVMFPD 321 PN + V KG S L+ ++ASGH S+FD+VYVD SHQA D VL D IL+FRLLK GG +IFDD + F D Sbjct: 98 PNPVELVVHKGFSHAQLAKILASGHESSFDMVYVDGSHQAPD-------------VLCDAILSFRLLKTGGLLIFDDYLWFED 167
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Match: A0A7T4N0Q6_9BURK (Class I SAM-dependent methyltransferase n=1 Tax=Paraburkholderia ginsengisoli TaxID=311231 RepID=A0A7T4N0Q6_9BURK) HSP 1 Score: 70.9 bits (172), Expect = 1.870e-12 Identity = 44/93 (47.31%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 37 IQETFRYNI----AKVPNRQRVQVIKGDSMLSLSALIASGHSSAFDVVYVDASHQARDLELLMEGLLHLADVLADGILAFRLLKVGGKIIFDD 303 ++ F +N+ K P+R RV V KG S L+ L+A G FD VYVD SHQA ADVLAD +L FRLLKVGG I FDD Sbjct: 82 VEARFHHNVRLAAGKYPDRVRVTVHKGYSDECLARLLADGKKGYFDFVYVDGSHQA-------------ADVLADAVLGFRLLKVGGIIAFDD 161
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Match: A0A7Y0XYH9_9CHLB (Class I SAM-dependent methyltransferase n=1 Tax=Chlorobiaceae bacterium TaxID=2067991 RepID=A0A7Y0XYH9_9CHLB) HSP 1 Score: 68.6 bits (166), Expect = 1.510e-11 Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = 1 Query: 22 HRFCGI-----QETFRYN----IAKVPNRQRVQVIKGDSMLSLSALIASGHSSAFDVVYVDASHQARDLELLMEGLLHLADVLADGILAFRLLKVGGKIIFDD 303 H+ CGI + F +N ++KV R+ + KG S SL+ALI+ H ++FD+VYVD SHQA D VLAD +++F+LL+VGG ++FDD Sbjct: 77 HQDCGIDMAAVESRFLHNTSLALSKVSMSVRLVLHKGYSDYSLAALISQNHGNSFDMVYVDGSHQAPD-------------VLADAVMSFKLLRVGGIMVFDD 166
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Match: A0A5B0HBR6_9BURK (Class I SAM-dependent methyltransferase n=6 Tax=Burkholderiaceae TaxID=119060 RepID=A0A5B0HBR6_9BURK) HSP 1 Score: 67.4 bits (163), Expect = 3.830e-11 Identity = 41/93 (44.09%), Postives = 51/93 (54.84%), Query Frame = 1 Query: 37 IQETFRYNIA----KVPNRQRVQVIKGDSMLSLSALIASGHSSAFDVVYVDASHQARDLELLMEGLLHLADVLADGILAFRLLKVGGKIIFDD 303 ++ F +N+ K P R ++ V KG S L+ LIA+G FD VYVD SHQA ADVLAD +L F+LLK GG I FDD Sbjct: 82 VESRFHHNVTLAAGKYPGRAQLTVHKGYSDECLACLIAAGKKGYFDFVYVDGSHQA-------------ADVLADAVLGFKLLKAGGIIAFDD 161
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Match: A0A7S4KFR5_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4KFR5_9EUKA) HSP 1 Score: 66.6 bits (161), Expect = 5.820e-11 Identity = 37/92 (40.22%), Postives = 51/92 (55.43%), Query Frame = 1 Query: 49 FRYNIAKVPNRQRVQVIKGDSMLSLSALIASG-------HSSAFDVVYVDASHQARDLELLMEGLLHLADVLADGILAFRLLKVGGKIIFDD 303 F N+A+ PN RV+ +G ++ +L +IA+ AFD++YVDA H A +DVLAD LAFRLL+VGG + FDD Sbjct: 69 FSANVARTPNGGRVRTFRGSTLAALGGMIAAAADGDQAAEGDAFDLIYVDAGHSA-------------SDVLADAALAFRLLRVGGLVFFDD 147
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Match: A0A7S2V1H4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1H4_9STRA) HSP 1 Score: 66.2 bits (160), Expect = 7.010e-11 Identity = 31/85 (36.47%), Postives = 53/85 (62.35%), Query Frame = 1 Query: 49 FRYNIAKVPNRQRVQVIKGDSMLSLSALIASGHSSAFDVVYVDASHQARDLELLMEGLLHLADVLADGILAFRLLKVGGKIIFDD 303 + N PN++++++++GDS+ L+ L+ G + +DV+YVD H+ ++VLAD +L+FRLLK+GG +IFDD Sbjct: 56 YHQNTCSHPNKEKIRILEGDSLSGLAQLV--GENKKYDVIYVDGGHEV-------------SEVLADSVLSFRLLKIGGLMIFDD 125
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Match: A0A7G8VVU2_9BURK (Class I SAM-dependent methyltransferase n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A7G8VVU2_9BURK) HSP 1 Score: 65.5 bits (158), Expect = 2.040e-10 Identity = 37/81 (45.68%), Postives = 46/81 (56.79%), Query Frame = 1 Query: 61 IAKVPNRQRVQVIKGDSMLSLSALIASGHSSAFDVVYVDASHQARDLELLMEGLLHLADVLADGILAFRLLKVGGKIIFDD 303 I P+ + V KG S + L+ L+ GH+ FD VYVD SHQA D VLAD +L FRLL+VGG +IFDD Sbjct: 94 IRNAPSAVNLVVHKGLSDVCLAQLVGQGHAETFDFVYVDGSHQAPD-------------VLADAVLGFRLLRVGGVMIFDD 161 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig12190.1388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig12190.1388.1 >prot_H-paniculata_contig12190.1388.1 ID=prot_H-paniculata_contig12190.1388.1|Name=mRNA_H-paniculata_contig12190.1388.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=129bp MSTQDTSHRFCGIQETFRYNIAKVPNRQRVQVIKGDSMLSLSALIASGHSback to top mRNA from alignment at H-paniculata_contig12190:6235..7535+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig12190.1388.1 ID=mRNA_H-paniculata_contig12190.1388.1|Name=mRNA_H-paniculata_contig12190.1388.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1301bp|location=Sequence derived from alignment at H-paniculata_contig12190:6235..7535+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig12190:6235..7535+ >mRNA_H-paniculata_contig12190.1388.1 ID=mRNA_H-paniculata_contig12190.1388.1|Name=mRNA_H-paniculata_contig12190.1388.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=774bp|location=Sequence derived from alignment at H-paniculata_contig12190:6235..7535+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |