prot_H-paniculata_contig61559.13872.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61559.13872.1
Unique Nameprot_H-paniculata_contig61559.13872.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length74
Homology
BLAST of mRNA_H-paniculata_contig61559.13872.1 vs. uniprot
Match: A0A6H5K4U0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U0_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.290e-14
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    9 RRSLYGRGAWSADFRLDSNGKRVPDTDIESASVACYTFPSLLASGKVPAAAWDAVKENVP 68
            RRS YGRG WS +F  + N K   D   ES    C+TFPSLL SGK+P+A WDAV+E+VP
Sbjct:   34 RRSKYGRGVWSQEFLKEGN-KLTADQGTESVEAVCFTFPSLLQSGKLPSAVWDAVEESVP 92          
BLAST of mRNA_H-paniculata_contig61559.13872.1 vs. uniprot
Match: A0A6H5KIQ0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIQ0_9PHAE)

HSP 1 Score: 73.6 bits (179), Expect = 1.360e-13
Identity = 34/60 (56.67%), Postives = 41/60 (68.33%), Query Frame = 0
Query:    9 RRSLYGRGAWSADFRLDSNGKRVPDTDIESASVACYTFPSLLASGKVPAAAWDAVKENVP 68
            RRS YGRG WS +F  + N K   D   ES    C+TFPSLL SGK+P+A WDAV+E+VP
Sbjct:  281 RRSKYGRGVWSQEFLKEGN-KLTADQGTESVEAVCFTFPSLLQSGKLPSAVWDAVEESVP 339          
BLAST of mRNA_H-paniculata_contig61559.13872.1 vs. uniprot
Match: A0A6H5K3A9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3A9_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 6.050e-13
Identity = 32/58 (55.17%), Postives = 39/58 (67.24%), Query Frame = 0
Query:    9 RRSLYGRGAWSADFRLDSNGKRVPDTDIESASVACYTFPSLLASGKVPAAAWDAVKEN 66
            RRS YGRG WS +F  + N K   D   ES    C+TFPSLL SGK+P+A WDAV+E+
Sbjct:  129 RRSKYGRGVWSQEFLKEGN-KLTADQGTESVEAVCFTFPSLLQSGKLPSAVWDAVEES 185          
BLAST of mRNA_H-paniculata_contig61559.13872.1 vs. uniprot
Match: A0A6H5KD34_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD34_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.410e-12
Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 0
Query:    9 RRSLYGRGAWSADFRLDSNGKRVPDTDIESASVACYTFPSLLASGKVPAAAWDAVKENVP 68
            RRS YGRG WS +  L    K   D   ES    C+TFPSLL SGK+P+A WDAV+E+VP
Sbjct:  232 RRSKYGRGVWSQE-NLKEGNKLTADQGTESVKAVCFTFPSLLQSGKLPSAVWDAVEESVP 290          
BLAST of mRNA_H-paniculata_contig61559.13872.1 vs. uniprot
Match: D7FYY8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYY8_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 1.960e-11
Identity = 32/60 (53.33%), Postives = 38/60 (63.33%), Query Frame = 0
Query:    9 RRSLYGRGAWSADFRLDSNGKRVPDTDIESASVACYTFPSLLASGKVPAAAWDAVKENVP 68
            RRS YGRG WS  F L  + K  PD   ES    C+TF SLL SGK+P+  W AV+E+VP
Sbjct:  236 RRSRYGRGVWSQQF-LKQDNKLTPDQSTESIKSVCFTFQSLLQSGKLPSGVWAAVEESVP 294          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61559.13872.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5K4U0_9PHAE1.290e-1456.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KIQ0_9PHAE1.360e-1356.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3A9_9PHAE6.050e-1355.17Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KD34_9PHAE1.410e-1255.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYY8_ECTSI1.960e-1153.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61559contigH-paniculata_contig61559:188..409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61559.13872.1mRNA_H-paniculata_contig61559.13872.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61559 188..411 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61559.13872.1 ID=prot_H-paniculata_contig61559.13872.1|Name=mRNA_H-paniculata_contig61559.13872.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=74bp
PKTKKVPRRRSLYGRGAWSADFRLDSNGKRVPDTDIESASVACYTFPSLL
ASGKVPAAAWDAVKENVPPPLEE*
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