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Homology
BLAST of mRNA_H-paniculata_contig6153.13868.1 vs. uniprot
Match: D7FS07_ECTSI (Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS07_ECTSI) HSP 1 Score: 142 bits (358), Expect = 1.730e-34 Identity = 140/224 (62.50%), Postives = 159/224 (70.98%), Query Frame = 1
Query: 1 RTLTTNASIWTAAELGDVDRVRTQIKDKGRSPDSLDPHGYTPLHLAAQHGRLPVVRFLLESGASPDGVAQETGGCGAXXXXXXXXXXXXXXXXXXXXXXXXXNAADSSFLDMKAPXXXXXXXXXXXXXXXXXXXXXXXXXXDFAGNYPMDLV-----FLRWSQRTPCPYCSGTGGCSCAVGDSIVLQNEDNALSLPEGGADGGKNWKGVAEALAQYGGRRRRRS 657
RTLTTNASIWTAAELGDV RVR + KGR PDSLDPHGY PLHLAAQ+GRL VV +LLE+GASPDGV + GGCGA XXXXXXXXXXXXXXXXXXXXXXX NAAD+SF DM+ XXXXXXXXXXXXXXXXXXXXXXXXXX AGN +D++ L + P+ G+ G ++ + GA G NW GV EAL ++GG RR R+
Sbjct: 21 RTLTTNASIWTAAELGDVARVRVSVGVKGRRPDSLDPHGYCPLHLAAQNGRLSVVLYLLEAGASPDGVPADAGGCGATXXXXXXXXXXXXXXXXXXXXXXXTNAADTSFADMRTXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAGNSALDVLCLSVPILPEAMPARSPHSEGSSGAXXXXXXXXC------SIVVLSSGA--GNNWGGVREALERHGGLRRMRA 236
BLAST of mRNA_H-paniculata_contig6153.13868.1 vs. uniprot
Match: A0A0L0DDM3_THETB (TKL protein kinase n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DDM3_THETB) HSP 1 Score: 60.5 bits (145), Expect = 4.760e-6 Identity = 28/58 (48.28%), Postives = 37/58 (63.79%), Query Frame = 1
Query: 25 IWTAAELGDVDRVRTQIKDKGRSPDSLDPHGYTPLHLAAQHGRLPVVRFLLESGASPD 198
+W A DV+ VR I+ +P S D HG T +H+AA HGR+ ++R LLESG SPD
Sbjct: 84 VWQAVADNDVEAVRWWIESTRVAPGSPDTHGNTAVHVAAHHGRVDILRILLESGGSPD 141
BLAST of mRNA_H-paniculata_contig6153.13868.1 vs. uniprot
Match: S3VTX2_9LEPT (Ankyrin repeat protein n=7 Tax=Leptospira wolffii TaxID=409998 RepID=S3VTX2_9LEPT) HSP 1 Score: 54.3 bits (129), Expect = 8.130e-5 Identity = 25/56 (44.64%), Postives = 36/56 (64.29%), Query Frame = 1
Query: 22 SIWTAAELGDVDRVRTQIKDKGRSPDSLDPHGYTPLHLAAQHGRLPVVRFLLESGA 189
+++ A LG +RVR ++ S P G+TPLHLAA +GRLP++ +LLE GA
Sbjct: 62 NLFEATALGKEERVRELVEKDPSLVRSYSPDGWTPLHLAAHYGRLPLIEYLLEKGA 117
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 140.6 |
| Seed ortholog evalue | 1.8e-30 |
| Seed eggNOG ortholog | 2880.D7FS07 |
| KEGG ko | ko:K15503 |
| Hectar predicted targeting category | other localisation |
| EggNOG free text desc. | response to abiotic stimulus |
| EggNOG OGs | COG0666@1,KOG4177@2759 |
| COG Functional cat. | G |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko01009,ko03400 |
| Exons | 3 |
| Model size | 1308 |
| Cds size | 1305 |
| Stop | 0 |
| Start | 0 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6153.13868.1 >prot_H-paniculata_contig6153.13868.1 ID=prot_H-paniculata_contig6153.13868.1|Name=mRNA_H-paniculata_contig6153.13868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=435bp
RTLTTNASIWTAAELGDVDRVRTQIKDKGRSPDSLDPHGYTPLHLAAQHG
RLPVVRFLLESGASPDGVAQETGGCGATPLHRAAYSGQISCVQALLAAGA
DPNAADSSFLDMKAPLHKAVDQCHGEIAIALMDAGAKPNASDFAGNYPMD
LVFLRWSQRTPCPYCSGTGGCSCAVGDSIVLQNEDNALSLPEGGADGGKN
WKGVAEALAQYGGRRRRRSDESRHILASSGARSFPHIATSAELTNDNRGD
VAVVDGGLQQAENLVLLTSAPTEDILLDASHHSPTAVVQPLELSSIALAT
FTVESEKGGQAGGGGVDERARRDYIHPTCSGEKQEPADDFLPLPAPAPRL
PEKEKTNHSESFGSDHEGRGDGEALGEKVPRNGASIGGSRTSGAAVDAAE
CMPEGLLAGKKSTVIAPGIVGADNGRISSSRTEGA back to topmRNA from alignment at H-paniculata_contig6153:9307..11908- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6153.13868.1 ID=mRNA_H-paniculata_contig6153.13868.1|Name=mRNA_H-paniculata_contig6153.13868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2602bp|location=Sequence derived from alignment at H-paniculata_contig6153:9307..11908- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGAACTTTGACAACGAACGCTAGCATCTGGACCGCTGCAGAACTCGGGGA
CGTCGATCGCGTACGCACACAGATCAAAGACAAAGGACGCAGTCCGGATT
CGCTCGACCCGCATGGGTACACGCCGCTCCATCTGGCTGCGCAGCGTGAG
TCCGCAGTATACGCCATGCGCTTGCAGCCTGCTCACCTCTTCGCCGCTTG
CCGCACACGGAATTCAACTCATGGAAACTGTGTAGTACCAGGTAGTGTAC
TATTTTCATTGCAGGCGTTTAACGTACGATCTGTGGATGTATCCTATTGT
AGCGTATGCTGGGCTACACGCTGTATGTGTACGTCGGTCCAACTGTTGCT
GTTGGAATCGTTTGCTGTGTCGTAGGAGCAGTGCGACGAGACTGCCATCT
TCAAGCAAAATGGACTCTCAGCTCCAATTTTCACGCTTTTGGTCGACATT
GGGGCGACTGCAGGTTGCATCGATCTCTGCCAACTGTATTTTGGATAAGG
CGAGTTATTGTAGCACATTTGTATCCTACATATCTAGATGTCATCCACAT
TTGGCATAGGTGTGTTGAACTGCAGCATATGTGGTCCCACGGCTTCTAGG
CATGGTGGCTCGTCGCTTGCACGGGAATACAGCATCGGTCCACTCATAAG
GAACAGAGATCCAGGTTCAGTCTGATCTTCTCGTCGTTCACGAGCGCATC
GGGAAGCTAATCTACTTGGATTCAGTGCAGGTAGAACGTCCCAACCTGCG
AAATTCCTCACTTTTACAAGAATATTCAGCTTGGATTTCTTCCAGGCCAT
ATTCTTGTGAAAAACATGCTATCGTTACTGTAGTGGAAGGAGCACAAAGC
TGCCGCTAGAGGTACTTTGATTTTGATTTGTTCAGCACCCAGTAGAATGG
GGTACTTCTCAATAGCGGCAAAAAGTACGAGGACTTCAAGGTAATGAGCG
AGAAATTTCAACACTGCATTGATTATTTTGCCGATTTAATTTTATGTATG
ATGTCCACGCCCACTATCTCCCCTCTCTCTCCCGCTTTTGCGCGCTTTCT
CGCTCTCCCAGATGGTAGGTTGCCGGTGGTTCGCTTCCTGCTGGAGTCAG
GCGCTAGCCCCGACGGGGTAGCGCAGGAAACTGGAGGCTGTGGAGCAACA
CCGCTTCACAGGTAGGCCAGGTGTAGCACGGAGGGATGACTGGGCCGCAC
TTTGCGCAGATTACCGGAGGGTGCTCAAGTTTGTTTTCCCTGTTTTCCGG
TATCACGTCGGAGGCGATTCTGCACTGTACCTAAATTCTTGTGCACTGTA
TGGGCTACCTCAGTCCTGGTTATTGGCGCTCGGATATGTACCTGTAGGTA
CTAAGCGCTCTCGCGAAACAATGAAAAATCTTGCGAGGTGGGGGAACCCC
ACTGTAGTCTATGCCTGCCCTTCTCTGCTCCTAGTCCATCGTCTATATCC
TCAAGATTTTTATACCCCTGGGCTCGGTCAACCAGTAGTTAAGGTAAACC
CGGCTCACACGCTCTTTACCTGCCTTCTCCCCATGCTCAAGGGCGGCGTA
TTCTGGCCAAATATCGTGCGTACAAGCCTTGCTTGCCGCCGGAGCGGATC
CCAACGCCGCCGATTCCTCCTTCCTGGACATGAAAGCCCCTCTACACAAG
GCGGTGGACCAATGCCATGGAGAGATCGCCATCGCGCTGATGGACGCTGG
CGCCAAACCAAACGCCTCTGACTTTGCGGGGAACTACCCGATGGACTTGG
TATTTTTGCGTTGGTCGCAGAGGACCCCCTGTCCTTATTGCTCCGGAACG
GGCGGGTGTAGTTGCGCCGTGGGCGACTCTATTGTTTTGCAAAACGAGGA
CAATGCTTTATCGTTGCCAGAGGGTGGCGCCGATGGAGGCAAAAATTGGA
AGGGCGTAGCGGAGGCTCTAGCGCAATACGGAGGCCGGCGACGACGGCGC
AGCGATGAAAGCCGGCACATCCTCGCAAGCAGCGGAGCTCGAAGTTTCCC
TCACATCGCCACCAGCGCGGAGCTCACCAACGATAATCGTGGAGATGTTG
CTGTAGTGGATGGGGGTTTGCAGCAAGCGGAAAATTTAGTGCTATTAACT
TCAGCGCCGACAGAAGATATACTGCTTGACGCTTCCCATCACTCGCCGAC
GGCAGTTGTGCAGCCGTTGGAGCTATCATCAATAGCATTAGCTACCTTTA
CGGTCGAATCGGAGAAGGGCGGACAAGCCGGCGGCGGAGGTGTGGACGAG
CGAGCTCGCAGGGATTACATCCATCCGACTTGTAGTGGTGAAAAGCAAGA
GCCCGCTGATGATTTCCTGCCGCTGCCGGCGCCGGCGCCGCGGCTCCCAG
AGAAGGAGAAAACTAATCATAGTGAAAGCTTCGGCAGTGACCACGAAGGT
CGAGGAGATGGGGAAGCACTTGGAGAGAAAGTCCCTCGAAACGGGGCTAG
TATCGGGGGTAGCAGGACTTCTGGTGCCGCAGTCGACGCAGCTGAATGCA
TGCCAGAGGGTCTGTTGGCGGGAAAAAAGAGCACCGTAATTGCGCCAGGT
ATTGTAGGTGCCGACAATGGCAGGATAAGCAGTAGTAGGACCGAAGGGGC
GG back to topCoding sequence (CDS) from alignment at H-paniculata_contig6153:9307..11908- >mRNA_H-paniculata_contig6153.13868.1 ID=mRNA_H-paniculata_contig6153.13868.1|Name=mRNA_H-paniculata_contig6153.13868.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2610bp|location=Sequence derived from alignment at H-paniculata_contig6153:9307..11908- (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGAACTTTGACAACGAACGCTAGCATCTGGACCGCTGCAGAACTCGGGGA
CGTCGATCGCGTACGCACACAGATCAAAGACAAAGGACGCAGTCCGGATT
CGCTCGACCCGCATGGGTACACGCCGCTCCATCTGGCTGCGCAGCAGAAC
TTTGACAACGAACGCTAGCATCTGGACCGCTGCAGAACTCGGGGACGTCG
ATCGCGTACGCACACAGATCAAAGACAAAGGACGCAGTCCGGATTCGCTC
GACCCGCATGGGTACACGCCGCTCCATCTGGCTGCGCAGCATGGTAGGTT
GCCGGTGGTTCGCTTCCTGCTGGAGTCAGGCGCTAGCCCCGACGGGGTAG
CGCAGGAAACTGGAGGCTGTGGAGCAACACCGCTTCACAGATGGTAGGTT
GCCGGTGGTTCGCTTCCTGCTGGAGTCAGGCGCTAGCCCCGACGGGGTAG
CGCAGGAAACTGGAGGCTGTGGAGCAACACCGCTTCACAGGGCGGCGTAT
TCTGGCCAAATATCGTGCGTACAAGCCTTGCTTGCCGCCGGAGCGGATCC
CAACGCCGCCGATTCCTCCTTCCTGGACATGAAAGCCCCTCTACACAAGG
CGGTGGACCAATGCCATGGAGAGATCGCCATCGCGCTGATGGACGCTGGC
GCCAAACCAAACGCCTCTGACTTTGCGGGGAACTACCCGATGGACTTGGT
ATTTTTGCGTTGGTCGCAGAGGACCCCCTGTCCTTATTGCTCCGGAACGG
GCGGGTGTAGTTGCGCCGTGGGCGACTCTATTGTTTTGCAAAACGAGGAC
AATGCTTTATCGTTGCCAGAGGGTGGCGCCGATGGAGGCAAAAATTGGAA
GGGCGTAGCGGAGGCTCTAGCGCAATACGGAGGCCGGCGACGACGGCGCA
GCGATGAAAGCCGGCACATCCTCGCAAGCAGCGGAGCTCGAAGTTTCCCT
CACATCGCCACCAGCGCGGAGCTCACCAACGATAATCGTGGAGATGTTGC
TGTAGTGGATGGGGGTTTGCAGCAAGCGGAAAATTTAGTGCTATTAACTT
CAGCGCCGACAGAAGATATACTGCTTGACGCTTCCCATCACTCGCCGACG
GCAGTTGTGCAGCCGTTGGAGCTATCATCAATAGCATTAGCTACCTTTAC
GGTCGAATCGGAGAAGGGCGGACAAGCCGGCGGCGGAGGTGTGGACGAGC
GAGCTCGCAGGGATTACATCCATCCGACTTGTAGTGGTGAAAAGCAAGAG
CCCGCTGATGATTTCCTGCCGCTGCCGGCGCCGGCGCCGCGGCTCCCAGA
GAAGGAGAAAACTAATCATAGTGAAAGCTTCGGCAGTGACCACGAAGGTC
GAGGAGATGGGGAAGCACTTGGAGAGAAAGTCCCTCGAAACGGGGCTAGT
ATCGGGGGTAGCAGGACTTCTGGTGCCGCAGTCGACGCAGCTGAATGCAT
GCCAGAGGGTCTGTTGGCGGGAAAAAAGAGCACCGTAATTGCGCCAGGTA
TTGTAGGTGCCGACAATGGCAGGATAAGCAGTAGTAGGACCGAAGGGGCG
GGCGGCGTATTCTGGCCAAATATCGTGCGTACAAGCCTTGCTTGCCGCCG
GAGCGGATCCCAACGCCGCCGATTCCTCCTTCCTGGACATGAAAGCCCCT
CTACACAAGGCGGTGGACCAATGCCATGGAGAGATCGCCATCGCGCTGAT
GGACGCTGGCGCCAAACCAAACGCCTCTGACTTTGCGGGGAACTACCCGA
TGGACTTGGTATTTTTGCGTTGGTCGCAGAGGACCCCCTGTCCTTATTGC
TCCGGAACGGGCGGGTGTAGTTGCGCCGTGGGCGACTCTATTGTTTTGCA
AAACGAGGACAATGCTTTATCGTTGCCAGAGGGTGGCGCCGATGGAGGCA
AAAATTGGAAGGGCGTAGCGGAGGCTCTAGCGCAATACGGAGGCCGGCGA
CGACGGCGCAGCGATGAAAGCCGGCACATCCTCGCAAGCAGCGGAGCTCG
AAGTTTCCCTCACATCGCCACCAGCGCGGAGCTCACCAACGATAATCGTG
GAGATGTTGCTGTAGTGGATGGGGGTTTGCAGCAAGCGGAAAATTTAGTG
CTATTAACTTCAGCGCCGACAGAAGATATACTGCTTGACGCTTCCCATCA
CTCGCCGACGGCAGTTGTGCAGCCGTTGGAGCTATCATCAATAGCATTAG
CTACCTTTACGGTCGAATCGGAGAAGGGCGGACAAGCCGGCGGCGGAGGT
GTGGACGAGCGAGCTCGCAGGGATTACATCCATCCGACTTGTAGTGGTGA
AAAGCAAGAGCCCGCTGATGATTTCCTGCCGCTGCCGGCGCCGGCGCCGC
GGCTCCCAGAGAAGGAGAAAACTAATCATAGTGAAAGCTTCGGCAGTGAC
CACGAAGGTCGAGGAGATGGGGAAGCACTTGGAGAGAAAGTCCCTCGAAA
CGGGGCTAGTATCGGGGGTAGCAGGACTTCTGGTGCCGCAGTCGACGCAG
CTGAATGCATGCCAGAGGGTCTGTTGGCGGGAAAAAAGAGCACCGTAATT
GCGCCAGGTATTGTAGGTGCCGACAATGGCAGGATAAGCAGTAGTAGGAC
CGAAGGGGCG back to top
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