mRNA_H-paniculata_contig6152.13867.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: TBA2_PELFA (Tubulin alpha-2 chain n=45 Tax=cellular organisms TaxID=131567 RepID=TBA2_PELFA) HSP 1 Score: 778 bits (2008), Expect = 6.570e-283 Identity = 385/398 (96.73%), Postives = 392/398 (98.49%), Query Frame = 1
Query: 1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
+G+GKHVPRAVYVDLE TVCDEVR GTYRQLYHPEQIISGKEDAANNYARGHYTIGKEI+D+VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLG+LLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVC RNL IERP YTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAE+TNSVFEPAGMMT CDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY
Sbjct: 56 TGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTNCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 453
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A7S0Q113_9EUKA (Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 RepID=A0A7S0Q113_9EUKA) HSP 1 Score: 739 bits (1908), Expect = 1.130e-267 Identity = 356/398 (89.45%), Postives = 383/398 (96.23%), Query Frame = 1
Query: 1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
+G+GKHVPR + VDLE TV DE+R G+YR L+HPEQ+ISGKEDAANNYARGHYT+GKEI+D+VLDRIRKLADNCTGLQGF++FHATGGGTGSG G+LLLERLSVDYGRKSKLSF +TPAPQVATAVVEPYN VLS+HALLEHTDCTFCLDNEALYDVC RNL IERP YTNLNRL+AQV+SSLTASLRFDGALNVD++EFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSV E+TNSVFEP+ M+TKCDPRHGKYMACC+MYRGDVVPKDVN+AVA+IKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMV+NTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED GEEY
Sbjct: 56 TGAGKHVPRCLMVDLEPTVVDEIRTGSYRHLFHPEQLISGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADNCTGLQGFMIFHATGGGTGSGFGSLLLERLSVDYGRKSKLSFTVTPAPQVATAVVEPYNHVLSSHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLIAQVVSSLTASLRFDGALNVDLSEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDMGEEY 453
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A7S2A4A3_9STRA (Tubulin alpha chain n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A4A3_9STRA) HSP 1 Score: 731 bits (1886), Expect = 4.900e-265 Identity = 355/386 (91.97%), Postives = 375/386 (97.15%), Query Frame = 1
Query: 1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAE 1158
+G+GKHVPRAVYVDLE TVCDEVR G YRQLYHPEQIISGKEDAANNYARGHYTIGKEI+D VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLG+LLLERLSVDYGRKSKLSFA++P+P+V+TAVVEPYN VLSTHALLEHTDCTFCLDNEALYDVC +NL I+RP YTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS+EKA+HEQLSVAE+T SVFEP GMMT+CDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCMVANTTA+AEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVGAE AE
Sbjct: 13 TGNGKHVPRAVYVDLEPTVCDEVRAGAYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDDVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPEVSTAVVEPYNYVLSTHALLEHTDCTFCLDNEALYDVCRKNLDIDRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSEKAFHEQLSVAEITASVFEPGGMMTRCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMVANTTAVAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGAEAAE 398
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A7S1GLI0_CYCTE (Tubulin alpha chain n=9 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1GLI0_CYCTE) HSP 1 Score: 730 bits (1884), Expect = 1.730e-263 Identity = 360/398 (90.45%), Postives = 379/398 (95.23%), Query Frame = 1
Query: 1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
+GSGKHVPRAVYVDLE TVCDEVR+G+YRQLYHPEQII+GKEDAANNYARGHYT GKEI+D+VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLG+LLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVC RNL IERP YTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS KA+HEQLSVAE+TNSVFEP MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVA++KTKRTIQFVDWCPTGFKCGINYQ PT VPGGDLA V+RAVCMVANTTAIAEALSRIDHKFDLMY KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA+T + GE DF EEY
Sbjct: 91 TGSGKHVPRAVYVDLEPTVCDEVRHGSYRQLYHPEQIINGKEDAANNYARGHYTTGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLGIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISQAKAHHEQLSVAEITNSVFEPTNMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATVKTKRTIQFVDWCPTGFKCGINYQAPTPVPGGDLATVKRAVCMVANTTAIAEALSRIDHKFDLMYMKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAQTNDEGGE--DFDEEY 486
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A1E7FDT8_9STRA (Tubulin alpha chain n=4 Tax=Sar TaxID=2698737 RepID=A0A1E7FDT8_9STRA) HSP 1 Score: 718 bits (1854), Expect = 1.690e-259 Identity = 352/398 (88.44%), Postives = 377/398 (94.72%), Query Frame = 1
Query: 1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
+ SGKHVPRAV+VDLE TVCDEVR G Y +LYHPEQIISGKEDAANNYARGHYTIGKEI+D VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLG+LLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVC R+L I++P YTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAP+ISA+KA+HE LSVAE+T++VFEP MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINY+PP VPGGDLA V+RAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA++ GE E+ GEEY
Sbjct: 57 TSSGKHVPRAVFVDLEPTVCDEVRTGKYSKLYHPEQIISGKEDAANNYARGHYTIGKEIVDQVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRHLDIQKPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPVISADKAFHESLSVAEITSTVFEPTNMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYEPPKNVPGGDLAEVKRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS----GEPEELGEEY 450
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A455ZC01_9STRA (Tubulin alpha chain n=3 Tax=Eukaryota TaxID=2759 RepID=A0A455ZC01_9STRA) HSP 1 Score: 713 bits (1840), Expect = 2.470e-257 Identity = 349/398 (87.69%), Postives = 375/398 (94.22%), Query Frame = 1
Query: 1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
+G+GKHVPR+V VDLE TVCDEVR GTYR LYHPEQII+GKEDAANNYARGHYTIGKEI+D+VLDRIRK ADNCTGLQGFL F+A GGGTGSGLG+LLLERLSVDYGRKSKL F + P+PQV+TAVVEPYN VLSTH+LLEHTD LDNEA+YD+C R+L IERP YTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEVTN+ FEPA MM+KCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE +GEEY
Sbjct: 56 TGAGKHVPRSVMVDLEPTVCDEVRTGTYRALYHPEQIITGKEDAANNYARGHYTIGKEIVDLVLDRIRKTADNCTGLQGFLCFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFCVYPSPQVSTAVVEPYNCVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEVTNAAFEPASMMSKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRVDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE-YGEEY 452
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A1Y1I1D7_KLENI (Tubulin alpha chain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1D7_KLENI) HSP 1 Score: 707 bits (1826), Expect = 8.800e-256 Identity = 344/398 (86.43%), Postives = 377/398 (94.72%), Query Frame = 1
Query: 1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
+G+GKHVPRAV++DLE TV DEVR GTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEI+D+ LDRIRKLADNCTGLQGFLVF+A GGGTGSGLG+LLLERLSVDYG+KSKL F I P+PQV+TAVVEPYNSVLSTH+LLEHTD LDNEA+YD+C R+L IERP YTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAE+TNSV+EP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+AN+T++AE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEGEGEEE GEEY
Sbjct: 21 TGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSVYEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEGEEE--GEEY 416
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A061SEY1_9CHLO (Tubulin alpha chain (Fragment) n=4 Tax=Viridiplantae TaxID=33090 RepID=A0A061SEY1_9CHLO) HSP 1 Score: 708 bits (1828), Expect = 1.790e-255 Identity = 345/398 (86.68%), Postives = 376/398 (94.47%), Query Frame = 1
Query: 1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
+G+GKHVPRAV++DLE TV DEVR GTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEI+D+ LDRIRKL+DNCTGLQGFLVF+A GGGTGSGLG+LLLERLSVDYG+KSKL F + P+PQV+TAVVEPYNSVLSTH+LLEHTD LDNEA+YD+C R+L IERP YTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAE+TNS FEPA MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEGEGEEE GEEY
Sbjct: 59 TGAGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEGEEE--GEEY 454
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A7S4SRH8_9STRA (Tubulin alpha chain (Fragment) n=26 Tax=Eukaryota TaxID=2759 RepID=A0A7S4SRH8_9STRA) HSP 1 Score: 707 bits (1824), Expect = 9.090e-255 Identity = 343/396 (86.62%), Postives = 372/396 (93.94%), Query Frame = 1
Query: 1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGE 1188
+G+GKHVPRAV++DLE TV DEVR GTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEI+D+ LDRIRKLADNCTGLQGFLVF++ GGGTGSGLG+LLLERLSVDYG+KSKL F + P+PQV+TAVVEPYNSVLSTH+LLEHTD LDNEA+YD+C R L IERP YTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAPIISAEKAYHEQLSVAE+TNS FEPA MM KCDPRHGKYMACC+MYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+V RAVCM++N+TAIAE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG ETAEGEGEEE +GE
Sbjct: 51 TGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIETAEGEGEEEGYGE 446
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A426ZQ58_ENSVE (Tubulin alpha chain n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426ZQ58_ENSVE) HSP 1 Score: 704 bits (1816), Expect = 2.940e-254 Identity = 342/398 (85.93%), Postives = 375/398 (94.22%), Query Frame = 1
Query: 1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
SG+GKHVPRAV+VDLE TV DEVR GTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEI+D+ LDRIRKLADNCTGLQGFLVF+A GGGTGSGLG+LLLERLSVDYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD LDNEA+YD+C R+L IERP YTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAE+TNS FEP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+T++AE SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+ GEGEE+D G+EY
Sbjct: 21 SGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES--GEGEEDDEGDEY 416 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6152.13867.1 >prot_H-paniculata_contig6152.13867.1 ID=prot_H-paniculata_contig6152.13867.1|Name=mRNA_H-paniculata_contig6152.13867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=399bp SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARback to top mRNA from alignment at H-paniculata_contig6152:9314..11121- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6152.13867.1 ID=mRNA_H-paniculata_contig6152.13867.1|Name=mRNA_H-paniculata_contig6152.13867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1808bp|location=Sequence derived from alignment at H-paniculata_contig6152:9314..11121- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6152:9314..11121- >mRNA_H-paniculata_contig6152.13867.1 ID=mRNA_H-paniculata_contig6152.13867.1|Name=mRNA_H-paniculata_contig6152.13867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2394bp|location=Sequence derived from alignment at H-paniculata_contig6152:9314..11121- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |