mRNA_H-paniculata_contig6152.13867.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig6152.13867.1
Unique NamemRNA_H-paniculata_contig6152.13867.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: TBA2_PELFA (Tubulin alpha-2 chain n=45 Tax=cellular organisms TaxID=131567 RepID=TBA2_PELFA)

HSP 1 Score: 778 bits (2008), Expect = 6.570e-283
Identity = 385/398 (96.73%), Postives = 392/398 (98.49%), Query Frame = 1
Query:    1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
            +G+GKHVPRAVYVDLE TVCDEVR GTYRQLYHPEQIISGKEDAANNYARGHYTIGKEI+D+VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLG+LLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVC RNL IERP YTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAE+TNSVFEPAGMMT CDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY
Sbjct:   56 TGAGKHVPRAVYVDLEPTVCDEVRTGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEITNSVFEPAGMMTNCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 453          
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A7S0Q113_9EUKA (Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 RepID=A0A7S0Q113_9EUKA)

HSP 1 Score: 739 bits (1908), Expect = 1.130e-267
Identity = 356/398 (89.45%), Postives = 383/398 (96.23%), Query Frame = 1
Query:    1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
            +G+GKHVPR + VDLE TV DE+R G+YR L+HPEQ+ISGKEDAANNYARGHYT+GKEI+D+VLDRIRKLADNCTGLQGF++FHATGGGTGSG G+LLLERLSVDYGRKSKLSF +TPAPQVATAVVEPYN VLS+HALLEHTDCTFCLDNEALYDVC RNL IERP YTNLNRL+AQV+SSLTASLRFDGALNVD++EFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSV E+TNSVFEP+ M+TKCDPRHGKYMACC+MYRGDVVPKDVN+AVA+IKTKRT+QFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMV+NTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEED GEEY
Sbjct:   56 TGAGKHVPRCLMVDLEPTVVDEIRTGSYRHLFHPEQLISGKEDAANNYARGHYTVGKEIVDLVLDRIRKLADNCTGLQGFMIFHATGGGTGSGFGSLLLERLSVDYGRKSKLSFTVTPAPQVATAVVEPYNHVLSSHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLIAQVVSSLTASLRFDGALNVDLSEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVHEITNSVFEPSNMLTKCDPRHGKYMACCMMYRGDVVPKDVNSAVATIKTKRTVQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVSNTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDMGEEY 453          
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A7S2A4A3_9STRA (Tubulin alpha chain n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A4A3_9STRA)

HSP 1 Score: 731 bits (1886), Expect = 4.900e-265
Identity = 355/386 (91.97%), Postives = 375/386 (97.15%), Query Frame = 1
Query:    1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAE 1158
            +G+GKHVPRAVYVDLE TVCDEVR G YRQLYHPEQIISGKEDAANNYARGHYTIGKEI+D VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLG+LLLERLSVDYGRKSKLSFA++P+P+V+TAVVEPYN VLSTHALLEHTDCTFCLDNEALYDVC +NL I+RP YTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS+EKA+HEQLSVAE+T SVFEP GMMT+CDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCMVANTTA+AEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEF+EAREDLAALEKDYEEVGAE AE
Sbjct:   13 TGNGKHVPRAVYVDLEPTVCDEVRAGAYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDDVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPEVSTAVVEPYNYVLSTHALLEHTDCTFCLDNEALYDVCRKNLDIDRPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISSEKAFHEQLSVAEITASVFEPGGMMTRCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMVANTTAVAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFAEAREDLAALEKDYEEVGAEAAE 398          
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A7S1GLI0_CYCTE (Tubulin alpha chain n=9 Tax=Bacillariophyta TaxID=2836 RepID=A0A7S1GLI0_CYCTE)

HSP 1 Score: 730 bits (1884), Expect = 1.730e-263
Identity = 360/398 (90.45%), Postives = 379/398 (95.23%), Query Frame = 1
Query:    1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
            +GSGKHVPRAVYVDLE TVCDEVR+G+YRQLYHPEQII+GKEDAANNYARGHYT GKEI+D+VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLG+LLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVC RNL IERP YTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIIS  KA+HEQLSVAE+TNSVFEP  MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVA++KTKRTIQFVDWCPTGFKCGINYQ PT VPGGDLA V+RAVCMVANTTAIAEALSRIDHKFDLMY KRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA+T +  GE  DF EEY
Sbjct:   91 TGSGKHVPRAVYVDLEPTVCDEVRHGSYRQLYHPEQIINGKEDAANNYARGHYTTGKEIVDLVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLGIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISQAKAHHEQLSVAEITNSVFEPTNMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATVKTKRTIQFVDWCPTGFKCGINYQAPTPVPGGDLATVKRAVCMVANTTAIAEALSRIDHKFDLMYMKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAQTNDEGGE--DFDEEY 486          
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A1E7FDT8_9STRA (Tubulin alpha chain n=4 Tax=Sar TaxID=2698737 RepID=A0A1E7FDT8_9STRA)

HSP 1 Score: 718 bits (1854), Expect = 1.690e-259
Identity = 352/398 (88.44%), Postives = 377/398 (94.72%), Query Frame = 1
Query:    1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
            + SGKHVPRAV+VDLE TVCDEVR G Y +LYHPEQIISGKEDAANNYARGHYTIGKEI+D VLDRIRKLADNCTGLQGFLVFHATGGGTGSGLG+LLLERLSVDYGRKSKLSFA++P+PQV+TAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVC R+L I++P YTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAP+ISA+KA+HE LSVAE+T++VFEP  MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINY+PP  VPGGDLA V+RAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGA++    GE E+ GEEY
Sbjct:   57 TSSGKHVPRAVFVDLEPTVCDEVRTGKYSKLYHPEQIISGKEDAANNYARGHYTIGKEIVDQVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRHLDIQKPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPVISADKAFHESLSVAEITSTVFEPTNMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYEPPKNVPGGDLAEVKRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS----GEPEELGEEY 450          
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A455ZC01_9STRA (Tubulin alpha chain n=3 Tax=Eukaryota TaxID=2759 RepID=A0A455ZC01_9STRA)

HSP 1 Score: 713 bits (1840), Expect = 2.470e-257
Identity = 349/398 (87.69%), Postives = 375/398 (94.22%), Query Frame = 1
Query:    1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
            +G+GKHVPR+V VDLE TVCDEVR GTYR LYHPEQII+GKEDAANNYARGHYTIGKEI+D+VLDRIRK ADNCTGLQGFL F+A GGGTGSGLG+LLLERLSVDYGRKSKL F + P+PQV+TAVVEPYN VLSTH+LLEHTD    LDNEA+YD+C R+L IERP YTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAEVTN+ FEPA MM+KCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE  SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE +GEEY
Sbjct:   56 TGAGKHVPRSVMVDLEPTVCDEVRTGTYRALYHPEQIITGKEDAANNYARGHYTIGKEIVDLVLDRIRKTADNCTGLQGFLCFNAVGGGTGSGLGSLLLERLSVDYGRKSKLGFCVYPSPQVSTAVVEPYNCVLSTHSLLEHTDVAVMLDNEAIYDICRRSLDIERPTYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEVTNAAFEPASMMSKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRVDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEE-YGEEY 452          
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A1Y1I1D7_KLENI (Tubulin alpha chain n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I1D7_KLENI)

HSP 1 Score: 707 bits (1826), Expect = 8.800e-256
Identity = 344/398 (86.43%), Postives = 377/398 (94.72%), Query Frame = 1
Query:    1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
            +G+GKHVPRAV++DLE TV DEVR GTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEI+D+ LDRIRKLADNCTGLQGFLVF+A GGGTGSGLG+LLLERLSVDYG+KSKL F I P+PQV+TAVVEPYNSVLSTH+LLEHTD    LDNEA+YD+C R+L IERP YTNLNRL++QVISSLTASLRFDGALNVD+TEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAE+TNSV+EP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM+AN+T++AE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEGEGEEE  GEEY
Sbjct:   21 TGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQVISSLTASLRFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSVYEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMIANSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEGEEE--GEEY 416          
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A061SEY1_9CHLO (Tubulin alpha chain (Fragment) n=4 Tax=Viridiplantae TaxID=33090 RepID=A0A061SEY1_9CHLO)

HSP 1 Score: 708 bits (1828), Expect = 1.790e-255
Identity = 345/398 (86.68%), Postives = 376/398 (94.47%), Query Frame = 1
Query:    1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
            +G+GKHVPRAV++DLE TV DEVR GTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEI+D+ LDRIRKL+DNCTGLQGFLVF+A GGGTGSGLG+LLLERLSVDYG+KSKL F + P+PQV+TAVVEPYNSVLSTH+LLEHTD    LDNEA+YD+C R+L IERP YTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAE+TNS FEPA MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+TAIAE  SR+DHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+AEGEGEEE  GEEY
Sbjct:   59 TGAGKHVPRAVFIDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLSDNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRSLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTAIAEVFSRLDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAESAEGEGEEE--GEEY 454          
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A7S4SRH8_9STRA (Tubulin alpha chain (Fragment) n=26 Tax=Eukaryota TaxID=2759 RepID=A0A7S4SRH8_9STRA)

HSP 1 Score: 707 bits (1824), Expect = 9.090e-255
Identity = 343/396 (86.62%), Postives = 372/396 (93.94%), Query Frame = 1
Query:    1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGE 1188
            +G+GKHVPRAV++DLE TV DEVR GTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEI+D+ LDRIRKLADNCTGLQGFLVF++ GGGTGSGLG+LLLERLSVDYG+KSKL F + P+PQV+TAVVEPYNSVLSTH+LLEHTD    LDNEA+YD+C R L IERP YTNLNRL+AQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAPIISAEKAYHEQLSVAE+TNS FEPA MM KCDPRHGKYMACC+MYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+V RAVCM++N+TAIAE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG ETAEGEGEEE +GE
Sbjct:   51 TGAGKHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNSVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTAVVEPYNSVLSTHSLLEHTDVAVMLDNEAVYDICRRQLDIERPTYTNLNRLIAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPIISAEKAYHEQLSVAEITNSAFEPASMMAKCDPRHGKYMACCMMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVMRAVCMISNSTAIAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGIETAEGEGEEEGYGE 446          
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Match: A0A426ZQ58_ENSVE (Tubulin alpha chain n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426ZQ58_ENSVE)

HSP 1 Score: 704 bits (1816), Expect = 2.940e-254
Identity = 342/398 (85.93%), Postives = 375/398 (94.22%), Query Frame = 1
Query:    1 SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLERLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY 1194
            SG+GKHVPRAV+VDLE TV DEVR GTYRQL+HPEQ+ISGKEDAANN+ARGHYTIGKEI+D+ LDRIRKLADNCTGLQGFLVF+A GGGTGSGLG+LLLERLSVDYG+KSKL F + P+PQV+T+VVEPYNSVLSTH+LLEHTD    LDNEA+YD+C R+L IERP YTNLNRLV+QVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFML+SYAP+ISAEKAYHEQLSVAE+TNS FEP+ MM KCDPRHGKYMACCLMYRGDVVPKDVNAAVA+IKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLA+VQRAVCM++N+T++AE  SRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAE+  GEGEE+D G+EY
Sbjct:   21 SGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLVSQVISSLTASLRFDGALNVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQLSVAEITNSAFEPSSMMAKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPPTVVPGGDLAKVQRAVCMISNSTSVAEVFSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGAES--GEGEEDDEGDEY 416          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6152.13867.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
TBA2_PELFA6.570e-28396.73Tubulin alpha-2 chain n=45 Tax=cellular organisms ... [more]
A0A7S0Q113_9EUKA1.130e-26789.45Tubulin alpha chain n=24 Tax=Eukaryota TaxID=2759 ... [more]
A0A7S2A4A3_9STRA4.900e-26591.97Tubulin alpha chain n=1 Tax=Ditylum brightwellii T... [more]
A0A7S1GLI0_CYCTE1.730e-26390.45Tubulin alpha chain n=9 Tax=Bacillariophyta TaxID=... [more]
A0A1E7FDT8_9STRA1.690e-25988.44Tubulin alpha chain n=4 Tax=Sar TaxID=2698737 RepI... [more]
A0A455ZC01_9STRA2.470e-25787.69Tubulin alpha chain n=3 Tax=Eukaryota TaxID=2759 R... [more]
A0A1Y1I1D7_KLENI8.800e-25686.43Tubulin alpha chain n=1 Tax=Klebsormidium nitens T... [more]
A0A061SEY1_9CHLO1.790e-25586.68Tubulin alpha chain (Fragment) n=4 Tax=Viridiplant... [more]
A0A7S4SRH8_9STRA9.090e-25586.62Tubulin alpha chain (Fragment) n=26 Tax=Eukaryota ... [more]
A0A426ZQ58_ENSVE2.940e-25485.93Tubulin alpha chain n=1 Tax=Ensete ventricosum Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6152contigH-paniculata_contig6152:9314..11121 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score781.9
Seed ortholog evalue1.4e-223
Seed eggNOG ortholog2880.D7G923
KEGG koko:K07374
KEGG Pathwayko04145,ko04210,ko04530,ko04540,ko05130,map04145,map04210,map04530,map04540,map05130
Hectar predicted targeting categoryother localisation
EggNOG free text desc.structural constituent of cytoskeleton
EggNOG OGsCOG5023@1,KOG1376@2759
COG Functional cat.Z
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko03036,ko04147,ko04812
Exons4
Model size1197
Cds size1197
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6152.13867.1prot_H-paniculata_contig6152.13867.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig6152 9314..11121 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930694.0515606-CDS-H-paniculata_contig6152:9313..95171622930694.0515606-CDS-H-paniculata_contig6152:9313..9517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6152 9314..9517 -
1691481409.4806054-CDS-H-paniculata_contig6152:9313..95171691481409.4806054-CDS-H-paniculata_contig6152:9313..9517Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6152 9314..9517 -
1622930694.0709429-CDS-H-paniculata_contig6152:9694..99541622930694.0709429-CDS-H-paniculata_contig6152:9694..9954Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6152 9695..9954 -
1691481409.4935172-CDS-H-paniculata_contig6152:9694..99541691481409.4935172-CDS-H-paniculata_contig6152:9694..9954Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6152 9695..9954 -
1622930694.0892258-CDS-H-paniculata_contig6152:10230..106001622930694.0892258-CDS-H-paniculata_contig6152:10230..10600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6152 10231..10600 -
1691481409.5034547-CDS-H-paniculata_contig6152:10230..106001691481409.5034547-CDS-H-paniculata_contig6152:10230..10600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6152 10231..10600 -
1622930694.1099722-CDS-H-paniculata_contig6152:10758..111211622930694.1099722-CDS-H-paniculata_contig6152:10758..11121Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6152 10759..11121 -
1691481409.5222409-CDS-H-paniculata_contig6152:10758..111211691481409.5222409-CDS-H-paniculata_contig6152:10758..11121Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig6152 10759..11121 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig6152.13867.1

>prot_H-paniculata_contig6152.13867.1 ID=prot_H-paniculata_contig6152.13867.1|Name=mRNA_H-paniculata_contig6152.13867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=399bp
SGSGKHVPRAVYVDLESTVCDEVRNGTYRQLYHPEQIISGKEDAANNYAR
GHYTIGKEIIDVVLDRIRKLADNCTGLQGFLVFHATGGGTGSGLGALLLE
RLSVDYGRKSKLSFAITPAPQVATAVVEPYNSVLSTHALLEHTDCTFCLD
NEALYDVCCRNLSIERPAYTNLNRLVAQVISSLTASLRFDGALNVDVTEF
QTNLVPYPRIHFMLTSYAPIISAEKAYHEQLSVAEVTNSVFEPAGMMTKC
DPRHGKYMACCLMYRGDVVPKDVNAAVASIKTKRTIQFVDWCPTGFKCGI
NYQPPTVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFV
HWYVGEGMEEGEFSEAREDLAALEKDYEEVGAETAEGEGEEEDFGEEY*
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mRNA from alignment at H-paniculata_contig6152:9314..11121-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig6152.13867.1 ID=mRNA_H-paniculata_contig6152.13867.1|Name=mRNA_H-paniculata_contig6152.13867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1808bp|location=Sequence derived from alignment at H-paniculata_contig6152:9314..11121- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCAGGGTCCGGTAAGCACGTTCCGCGCGCCGTGTACGTGGACCTAGAGTC CACCGTGTGTGATGAGGTGCGCAACGGCACGTACCGTCAGCTGTATCACC CTGAGCAGATCATTTCGGGCAAAGAGGACGCCGCAAACAACTACGCGCGC GGCCACTACACCATCGGTAAGGAGATCATAGACGTGGTGCTCGACCGCAT CCGCAAGCTCGCGGATAACTGTACGGGTCTGCAGGGCTTCTTAGTGTTCC ACGCCACGGGCGGCGGAACCGGGTCGGGACTGGGCGCCCTGCTGCTGGAG CGCCTGTCGGTGGATTACGGGCGCAAGTCGAAGCTTTCGTTCGCCATTAC CCCGGCGCCGCAGGTAAGGGAAGCAAGGAAGCACATATAATAGTCTCAGG TAGTATGTGCTGCATTGAATACTGTTTCGCTCGCGTTGTTGGTGAAGAGT TTGTGCACCCATCTCGAATTATCTACACGACCCTGTATAACCGCTCTCTC CCTCCCCCGCCGTTGTCGAAGGTGGCTACCGCGGTCGTGGAACCCTACAA CTCGGTGCTCTCCACGCACGCCCTCCTGGAGCACACAGACTGCACCTTCT GCCTCGACAACGAGGCTCTCTACGACGTGTGCTGCCGTAACCTGAGCATC GAGCGCCCCGCGTACACTAACCTCAATCGGCTTGTGGCCCAGGTGATCTC CTCCCTGACGGCTTCGCTCCGGTTCGACGGAGCCCTTAACGTGGACGTGA CAGAGTTCCAGACCAACCTGGTGCCCTACCCTCGCATCCACTTCATGCTC ACATCGTACGCGCCCATCATCTCGGCGGAGAAGGCTTATCACGAGCAGCT CTCGGTCGCCGAGGTCACTAACTCGGTGTTCGAGCCTGCAGGTAAACGTC AACGCGTAAAGCTTTGCCCGTCTACCGCGTTGCGTCTAGAATTTCTAAAG CCCGCAATTTTTATTTGAGCGAGTATTCTGTAGACTTTTTTACTAGCGCA CGAAATACTCTTTCTATGAATGAACACACTGGCGGGACGGTTCATGTTTG AAAGTAAACGTATTTCAGCAAATCAACGACAGTTTATACCAATCTTTTTA TACTTGCAGTGAATTTGTCACCTTGCTCTGACTTCTTTTTGCTACTCAAA ACCTGATAATTGGACAGGCATGATGACCAAGTGCGACCCCCGCCACGGCA AGTACATGGCTTGCTGCCTAATGTACCGCGGGGACGTTGTGCCCAAGGAC GTGAACGCTGCCGTCGCCAGCATCAAGACCAAGCGCACGATCCAGTTCGT CGACTGGTGCCCCACCGGCTTCAAGTGCGGCATCAACTACCAGCCGCCTA CCGTTGTACCCGGCGGTGACCTCGCTCGCGTGCAGCGCGCAGTATGTATG GTTGCCAACACCACCGCCATCGCCGAGGTATGTTTCTGTCGTTGATGGGC GAACTGCTGTTGCTGATGAAAAATGTCCAGCTCAGAGGTTGGTCTGTAAC TTTTTTACTGTTGGTTCTGCAGCTTTGTTGATTGTACAATGCGTTTTTGT TTTCACTGGACCTCCACGCATGACTCTTTATGTTGTAACGTGTCCAACCA CCAGGCGTTGTCCCGCATCGATCATAAGTTCGACCTCATGTACGCCAAGC GTGCGTTCGTACACTGGTACGTGGGAGAGGGGATGGAAGAGGGTGAGTTC TCGGAGGCCCGTGAAGACTTGGCTGCCCTCGAGAAGGACTACGAAGAGGT CGGCGCCGAGACCGCTGAAGGCGAGGGTGAAGAGGAAGACTTTGGCGAGG AGTACTAG
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Coding sequence (CDS) from alignment at H-paniculata_contig6152:9314..11121-

>mRNA_H-paniculata_contig6152.13867.1 ID=mRNA_H-paniculata_contig6152.13867.1|Name=mRNA_H-paniculata_contig6152.13867.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2394bp|location=Sequence derived from alignment at H-paniculata_contig6152:9314..11121- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TCAGGGTCCGGTAAGCACGTTCCGCGCGCCGTGTACGTGGACCTAGAGTC
CACCGTGTGTGATGAGGTGCGCAACGGCACGTACCGTCAGCTGTATCACC
CTGAGCAGATCATTTCGGGCAAAGAGGACGCCGCAAACAACTACGCGCGC
GGCCACTACACCATCGGTAAGGAGATCATAGACGTGGTGCTCGACCGCAT
CCGCAAGCTCGCGGATAACTGTACGGGTCTGCAGGGCTTCTTAGTGTTCC
ACGCCACGGGCGGCGGAACCGGGTCGGGACTGGGCGCCCTGCTGCTGGAG
CGCCTGTCGGTGGATTACGGGCGCAAGTCGAAGCTTTCGTTCGCCATTAC
CCCGGCGCCGCAGTCAGGGTCCGGTAAGCACGTTCCGCGCGCCGTGTACG
TGGACCTAGAGTCCACCGTGTGTGATGAGGTGCGCAACGGCACGTACCGT
CAGCTGTATCACCCTGAGCAGATCATTTCGGGCAAAGAGGACGCCGCAAA
CAACTACGCGCGCGGCCACTACACCATCGGTAAGGAGATCATAGACGTGG
TGCTCGACCGCATCCGCAAGCTCGCGGATAACTGTACGGGTCTGCAGGGC
TTCTTAGTGTTCCACGCCACGGGCGGCGGAACCGGGTCGGGACTGGGCGC
CCTGCTGCTGGAGCGCCTGTCGGTGGATTACGGGCGCAAGTCGAAGCTTT
CGTTCGCCATTACCCCGGCGCCGCAGGTGGCTACCGCGGTCGTGGAACCC
TACAACTCGGTGCTCTCCACGCACGCCCTCCTGGAGCACACAGACTGCAC
CTTCTGCCTCGACAACGAGGCTCTCTACGACGTGTGCTGCCGTAACCTGA
GCATCGAGCGCCCCGCGTACACTAACCTCAATCGGCTTGTGGCCCAGGTG
ATCTCCTCCCTGACGGCTTCGCTCCGGTTCGACGGAGCCCTTAACGTGGA
CGTGACAGAGTTCCAGACCAACCTGGTGCCCTACCCTCGCATCCACTTCA
TGCTCACATCGTACGCGCCCATCATCTCGGCGGAGAAGGCTTATCACGAG
CAGCTCTCGGTCGCCGAGGTCACTAACTCGGTGTTCGAGCCTGCAGGTGG
CTACCGCGGTCGTGGAACCCTACAACTCGGTGCTCTCCACGCACGCCCTC
CTGGAGCACACAGACTGCACCTTCTGCCTCGACAACGAGGCTCTCTACGA
CGTGTGCTGCCGTAACCTGAGCATCGAGCGCCCCGCGTACACTAACCTCA
ATCGGCTTGTGGCCCAGGTGATCTCCTCCCTGACGGCTTCGCTCCGGTTC
GACGGAGCCCTTAACGTGGACGTGACAGAGTTCCAGACCAACCTGGTGCC
CTACCCTCGCATCCACTTCATGCTCACATCGTACGCGCCCATCATCTCGG
CGGAGAAGGCTTATCACGAGCAGCTCTCGGTCGCCGAGGTCACTAACTCG
GTGTTCGAGCCTGCAGGCATGATGACCAAGTGCGACCCCCGCCACGGCAA
GTACATGGCTTGCTGCCTAATGTACCGCGGGGACGTTGTGCCCAAGGACG
TGAACGCTGCCGTCGCCAGCATCAAGACCAAGCGCACGATCCAGTTCGTC
GACTGGTGCCCCACCGGCTTCAAGTGCGGCATCAACTACCAGCCGCCTAC
CGTTGTACCCGGCGGTGACCTCGCTCGCGTGCAGCGCGCAGTATGTATGG
TTGCCAACACCACCGCCATCGCCGAGGCATGATGACCAAGTGCGACCCCC
GCCACGGCAAGTACATGGCTTGCTGCCTAATGTACCGCGGGGACGTTGTG
CCCAAGGACGTGAACGCTGCCGTCGCCAGCATCAAGACCAAGCGCACGAT
CCAGTTCGTCGACTGGTGCCCCACCGGCTTCAAGTGCGGCATCAACTACC
AGCCGCCTACCGTTGTACCCGGCGGTGACCTCGCTCGCGTGCAGCGCGCA
GTATGTATGGTTGCCAACACCACCGCCATCGCCGAGGCGTTGTCCCGCAT
CGATCATAAGTTCGACCTCATGTACGCCAAGCGTGCGTTCGTACACTGGT
ACGTGGGAGAGGGGATGGAAGAGGGTGAGTTCTCGGAGGCCCGTGAAGAC
TTGGCTGCCCTCGAGAAGGACTACGAAGAGGTCGGCGCCGAGACCGCTGA
AGGCGAGGGTGAAGAGGAAGACTTTGGCGAGGAGTACTAGGCGTTGTCCC
GCATCGATCATAAGTTCGACCTCATGTACGCCAAGCGTGCGTTCGTACAC
TGGTACGTGGGAGAGGGGATGGAAGAGGGTGAGTTCTCGGAGGCCCGTGA
AGACTTGGCTGCCCTCGAGAAGGACTACGAAGAGGTCGGCGCCGAGACCG
CTGAAGGCGAGGGTGAAGAGGAAGACTTTGGCGAGGAGTACTAG
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