mRNA_H-paniculata_contig6150.13865.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Match: D8LLC3_ECTSI (3-oxoacyl-[acyl-carrier-protein] synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLC3_ECTSI) HSP 1 Score: 367 bits (941), Expect = 2.650e-123 Identity = 188/254 (74.02%), Postives = 213/254 (83.86%), Query Frame = 1
Query: 1 MLPPPAVIKQRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAADDSCRTGHKSNPYTKNYCTMQLSDRGSSFPTTLAGIVERG-SQAGQFPGSDSILCP---RGTPDFIDYAVHATREALSMSGWSARTAAEKDRAGVAIGSGIGSLEDVRDAYHTLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLRGPNHAVATACATGAHAIGDAYRFIKHGDADLMVCGGTEGSVHEPALAGFARMNALSTR 750
+LPPPA+I QRRVVVTGLGAVTPLANGMQA+W+ LL GKCGI+R++PS+ D GH+S +LSDR ++FPT+LAG V+RG +AGQFPG DS RGTP+FI +A+HA +EAL MSGW A T E+DRAGVAIGSGIGSLEDV D Y TLEGRGYRRLTPHFIPRILINLAAGHVAIEHGL+GPNHAVATACATGAHAIGDA+RFIKHGDAD+MVCGG+EGS+HEPALAGFARMNALSTR
Sbjct: 4 LLPPPAIISQRRVVVTGLGAVTPLANGMQASWERLLEGKCGIRRLKPSSQDSD---GHRSR---------KLSDRMTTFPTSLAGEVDRGLERAGQFPGPDSAATATSLRGTPEFIQFAMHAAKEALDMSGWRAETDRERDRAGVAIGSGIGSLEDVADCYRTLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLKGPNHAVATACATGAHAIGDAFRFIKHGDADVMVCGGSEGSIHEPALAGFARMNALSTR 245
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Match: L8GQ49_ACACA (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GQ49_ACACA) HSP 1 Score: 218 bits (556), Expect = 1.470e-65 Identity = 119/247 (48.18%), Postives = 160/247 (64.78%), Query Frame = 1
Query: 22 IKQRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAADDSCRTGHKSNPYTKNYCTMQLSDRGSSFPTTLAGIVERGS-QAGQFPGSDSILCPRG---TPDFIDYAVHATREALSMSGWSARTAAEKDRAGVAIGSGIGSLEDVRDAYHTLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLRGPNHAVATACATGAHAIGDAYRFIKHGDADLMVCGGTEGSVHEPALAGFARMNALSTR 750
+ +RRVVVTGLG VTPLA G+QATW L+ KCGI+R+ D P +AG V RG + G+F D + R TP FI +A+ A R+AL + W T AEK+R GVA+GSGIG+L+++ +TL+ GYR+++PHFIP+IL+N+AAG +++ HGLRGPNHA TACATGA+A+GDA RFI++GDAD+MV GGTE +H ALAGF+RM AL+++
Sbjct: 1 MSKRRVVVTGLGVVTPLATGVQATWGRLINAKCGIRRITQFDVSD--------------------------LPAKIAGNVLRGKDEHGEFE-LDKWVDKRDQAHTPAFIQFALSAARQALDDARWQPTTDAEKERTGVAVGSGIGTLDEIVSTANTLQTSGYRKVSPHFIPKILVNMAAGRISLAHGLRGPNHACITACATGANALGDASRFIQYGDADVMVAGGTEACIHPLALAGFSRMRALASK 220
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Match: A0A7I4ARE7_PHYPA (3-oxoacyl-[acyl-carrier-protein] synthase n=4 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4ARE7_PHYPA) HSP 1 Score: 211 bits (537), Expect = 2.500e-62 Identity = 120/251 (47.81%), Postives = 157/251 (62.55%), Query Frame = 1
Query: 4 LPPPAVIKQRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAADDSCRTGHKSNPYTKNYCTMQLSDRG--SSFPTTLAGIVERGSQAGQFPGSDSILCPRGTPDFIDYAVHATREALSMSGWSARTAAEKDRAGVAIGSGIGSLEDVRDAYHTLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLRGPNHAVATACATGAHAIGDAYRFIKHGDADLMVCGGTEGSVHEPALAGFARMNALSTR 750
LPPP I QRRVVVTGLG VTPL G+Q +WD L+ K G++ + + ++L D G P+ +A +V RGS AG F + +P FI YA A EAL+ + W + AA+ +R GVAIG GIGS+ D+ +A H + + RRLTP F+PRILIN+AAGHV+I HG +GPNHAV TACA+GAH++GDA R +K GDAD+MV GGTE S+ ++AGF R ALST+
Sbjct: 27 LPPPE-IPQRRVVVTGLGLVTPLGAGVQVSWDRLIALKTGVQALSAES--------------------LRLKDPGLLQQLPSRVAALVPRGSAAGDFDVEKWLNST--SPAFIAYAQCAAEEALTDANWHPQDAADLERTGVAIGGGIGSINDILEAAHLINKK-LRRLTPFFVPRILINMAAGHVSIRHGFKGPNHAVVTACASGAHSLGDAARMVKFGDADVMVAGGTESSIDPLSMAGFCRARALSTK 253
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Match: A0A835Z0F5_9STRA (Beta-ketoacyl-[acyl-carrier-protein] synthase I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F5_9STRA) HSP 1 Score: 207 bits (528), Expect = 1.240e-61 Identity = 121/251 (48.21%), Postives = 153/251 (60.96%), Query Frame = 1
Query: 4 LPPPAVIKQRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAADDSCRTGHKSNPYTKNYCTMQLSDRGSSFPTTLAGIVERGSQAGQFPGSDSILCPR---GTPDFIDYAVHATREALSMSGWS-ARTAAEKDRAGVAIGSGIGSLEDVRDAYHTLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLRGPNHAVATACATGAHAIGDAYRFIKHGDADLMVCGGTEGSVHEPALAGFARMNALS 744
LPPP + QRRVVVTGLGAVTPLA GM+ TW LL G+CGI++++P K+Y + PTTLA + RG G+ ++ + P FI YA+ AT+EAL + WS A A +RAGVAIG+GIGSLED DA+ RG RR++PHFIPR+L+N+AAG A LRGP H TACA+GAHA+ DA R I G+ADLMV GGTE V+ +L GF +M AL+
Sbjct: 5 LPPPLALVQRRVVVTGLGAVTPLACGMETTWKRLLEGQCGIRKLQPDE---------------KDYPLTHI----EQLPTTLAATISRGK--GEHAEAEFLFDESKWPSQPRFIQYALQATQEALRAARWSSAADPAAAERAGVAIGTGIGSLEDTMDAHAAALARGPRRISPHFIPRMLLNMAAGAAAQRFALRGPAHCATTACASGAHAVADALRLIAGGEADLMVAGGTEACVNVLSLGGFGKMRALA 234
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Match: A0A3Q8BIU7_9SPER (Beta-ketoacyl-[acyl-carrier-protein] synthase I (Fragment) n=17 Tax=Cupressaceae TaxID=3367 RepID=A0A3Q8BIU7_9SPER) HSP 1 Score: 207 bits (528), Expect = 4.960e-61 Identity = 113/249 (45.38%), Postives = 159/249 (63.86%), Query Frame = 1
Query: 10 PPAVIKQRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAADDSCRTGHKSNPYTKNYCTMQLSDRGSSFPTTLAGIVERGSQAGQFPGSD--SILCPRGTPDFIDYAVHATREALSMSGWSARTAAEKDRAGVAIGSGIGSLEDVRDAYHTLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLRGPNHAVATACATGAHAIGDAYRFIKHGDADLMVCGGTEGSVHEPALAGFARMNALSTR 750
PP QRRVVVTGLG V+PL G++A+W+ L+ GKCG++ + A+D G ++ + T++ P+ + V RG G+F + + FI YA+ A+ EAL +GWS+ +K++ GVAIG GIGS+ D+ +A + + RRL+P FIPRILIN+AAGHV+I++G +GPNHA ATACATGAH+IGDA+R I+ GDA++MV GGTE S ++AGF R ALST+
Sbjct: 36 PPPSSPQRRVVVTGLGMVSPLGTGVKASWEALIEGKCGVRAL---TAEDLNMEGFENETLLR---TLE------QLPSQVVASVPRGKNVGEFDEEYWLHLRDKKYMARFISYALCASEEALRDAGWSSEDTEQKEKTGVAIGGGIGSISDILEAAKLISEQRVRRLSPFFIPRILINMAAGHVSIKYGFKGPNHAAATACATGAHSIGDAFRMIRFGDAEVMVAGGTESSTDALSIAGFCRARALSTK 272
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Match: A0A0P1A962_PLAHL (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A962_PLAHL) HSP 1 Score: 207 bits (526), Expect = 6.870e-61 Identity = 115/251 (45.82%), Postives = 155/251 (61.75%), Query Frame = 1
Query: 7 PPPAVIKQRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAADDSCRTGHKSNPYTKNYCTMQLSDRGSSFPTTLAGIVERGSQAGQFPGSDSILCPR---GTPDFIDYAVHATREALSMSGWSARTAAEKDRAGVAIGSGIGSLEDVRDAYHTLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLRGPNHAVATACATGAHAIGDAYRFIKHGDADLMVCGGTEGSVHEPALAGFARMNALSTR 750
PPPA RRVVVTGLGAVTP G+ +W+ LL +C I+++R L+D G T+ V RG G+F D + PDFI +A+ A EA+ SGWS ++ E++RAGVAIG+G+G+++++ D ++ + YRR++P FI RILINLAAGHV+IEHGL+GPNHA TACATG H+IGDA I+HG+AD+MV GGTE S++E A+ F R ALST+
Sbjct: 19 PPPA--PSRRVVVTGLGAVTPFGLGVSRSWEALLESRCAIRQVRA------------------------LADTG--LKCTIGATVPRGDGEGEFRTKDWVNLNNFRAQEPDFIAFALAAADEAIKDSGWSPQSDEERERAGVAIGAGVGNIQEIVDVGQLIKDKKYRRVSPFFITRILINLAAGHVSIEHGLKGPNHACVTACATGVHSIGDAANLIRHGNADVMVAGGTEASINEIAICAFLRAQALSTK 241
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Match: I1HYC9_BRADI (3-oxoacyl-[acyl-carrier-protein] synthase n=24 Tax=BOP clade TaxID=359160 RepID=I1HYC9_BRADI) HSP 1 Score: 206 bits (525), Expect = 1.520e-60 Identity = 116/249 (46.59%), Postives = 154/249 (61.85%), Query Frame = 1
Query: 4 LPPPAVIKQRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAADDSCRTGHKSNPYTKNYCTMQLSDRGSSFPTTLAGIVERGSQAGQFPGSDSILCPRGTPDFIDYAVHATREALSMSGWSARTAAEKDRAGVAIGSGIGSLEDVRDAYHTLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLRGPNHAVATACATGAHAIGDAYRFIKHGDADLMVCGGTEGSVHEPALAGFARMNALSTR 750
LPPP RRVVVTGLGAVTPL G+ TWD L+ G C ++ + AA D TG + T++ P+ +A V RG +F R FI YA+ A EAL + W A+K+R GV+IG GIGS+ D+ DA T+ RRL+P+FIP+ILIN+A+GHV++++G +GPNHA TACATGAH+IGDA R I+ GDAD+MV GGTE S+ ++AGF+R+ ALST+
Sbjct: 22 LPPPRPSAGRRVVVTGLGAVTPLGRGVGTTWDRLVAGDCAVRAL---AAGDLRLTGDAAGR------TLE------QLPSRVAAAVPRGKGENEFDEEAWTKDSRSISGFIAYALCAADEALRDANWLPSEDAKKERTGVSIGGGIGSISDILDASQTITENRLRRLSPYFIPKILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSIAGFSRLRALSTK 255
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Match: H3G851_PHYRM (3-oxoacyl-[acyl-carrier-protein] synthase n=16 Tax=Phytophthora TaxID=4783 RepID=H3G851_PHYRM) HSP 1 Score: 204 bits (519), Expect = 8.120e-60 Identity = 115/251 (45.82%), Postives = 153/251 (60.96%), Query Frame = 1
Query: 7 PPPAVIKQRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAADDSCRTGHKSNPYTKNYCTMQLSDRGSSFPTTLAGIVERGSQAGQFPGSDSILCPR---GTPDFIDYAVHATREALSMSGWSARTAAEKDRAGVAIGSGIGSLEDVRDAYHTLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLRGPNHAVATACATGAHAIGDAYRFIKHGDADLMVCGGTEGSVHEPALAGFARMNALSTR 750
PPPA RRVVVTGLGAVTP G+ +WD LL KC I+ + L+D G T+ G V RG G F D + PDFI + + A EAL SGWS ++ E++RAGVAIG+G+G++++V D ++ + YRR++P F+ RILINLAAGHV+IEHGL+GPNH+ TACATG+H+IGDA I+HG+AD+MV GGTE S++E ++ F R ALST+
Sbjct: 22 PPPA--PNRRVVVTGLGAVTPFGVGVSRSWDALLDAKCAIQTVNA------------------------LADTG--LQCTIGGTVPRGEGDGAFRTKDWVNLKSLRSQEPDFIAFTLAAADEALKDSGWSPQSDEERERAGVAIGAGMGNIQEVMDVGQLIKDKKYRRVSPFFVTRILINLAAGHVSIEHGLKGPNHSCVTACATGSHSIGDAANLIRHGNADVMVAGGTEASLNEISICAFLRAQALSTK 244
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Match: A0A453NLL5_AEGTS (Ketoacyl_synth_N domain-containing protein n=7 Tax=Triticinae TaxID=1648030 RepID=A0A453NLL5_AEGTS) HSP 1 Score: 200 bits (508), Expect = 1.010e-59 Identity = 113/249 (45.38%), Postives = 152/249 (61.04%), Query Frame = 1
Query: 4 LPPPAVIKQRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAADDSCRTGHKSNPYTKNYCTMQLSDRGSSFPTTLAGIVERGSQAGQFPGSDSILCPRGTPDFIDYAVHATREALSMSGWSARTAAEKDRAGVAIGSGIGSLEDVRDAYHTLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLRGPNHAVATACATGAHAIGDAYRFIKHGDADLMVCGGTEGSVHEPALAGFARMNALSTR 750
LPPP RRVVVTGLGAVTPL G+ +TWD L+ G C ++ + AA+D TG + T++ P+ + V RG +F R FI YA+ A EAL + W +K+R GV+IG GIGS+ D+ DA + RRL+P FIP+ILIN+A+GHV++++G +GPNHA TACATGAH+IGDA R I+ GDAD+MV GGTE S+ ++AGF+R+ ALST+
Sbjct: 29 LPPPRPSACRRVVVTGLGAVTPLGRGVGSTWDRLVAGDCAVRAL---AAEDLRLTGDAAGR------TLE------QLPSRVFAAVPRGKGEAEFDEEAWTKDSRSISGFIAYALCAADEALRDANWLPSENEKKERTGVSIGGGIGSISDILDASQLIAENRLRRLSPFFIPKILINMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSIAGFSRLRALSTK 262
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Match: A0A3N4HID2_ASCIM (3-oxoacyl-[acyl-carrier-protein] synthase n=1 Tax=Ascobolus immersus RN42 TaxID=1160509 RepID=A0A3N4HID2_ASCIM) HSP 1 Score: 202 bits (515), Expect = 3.190e-59 Identity = 119/253 (47.04%), Postives = 152/253 (60.08%), Query Frame = 1
Query: 28 QRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAADDSCRTGHKSNPYTKNYCTMQLSDRGSSFPTTLAGIVERGSQA-GQFPGSDSILCP--RGTPDFIDYAVHATREALSMSGWSARTAAEKDRAGVAIGSGIGSLEDVRD---AYH-------TLEGRGYRRLTPHFIPRILINLAAGHVAIEHGLRGPNHAVATACATGAHAIGDAYRFIKHGDADLMVCGGTEGSVHEPALAGFARMNALST 747
QRRVV+TGLGAVTPL G+Q +W LL G GI P L + P+T+A +V RGS G + D + R F +AV A EAL SGW+ + AE++RAGV IGSGIGS +D D AYH T GYR+L+P F+PR+LINLAAGH+++ HGL+GPNH+V+TAC TGAH+IGDAYRFI H DAD+M+CGG+E +H A+ GFAR +L+T
Sbjct: 3 QRRVVITGLGAVTPLGVGVQKSWTSLLAGSSGIVSTTP------------------------LGPEYAELPSTVAAMVPRGSIVDGAWDAKDHLKNDDIRKMAGFSQFAVVAAEEALKDSGWNG-SEAERERAGVCIGSGIGSFQDAYDTTLAYHKGVRPPTTPFVWGYRKLSPLFVPRLLINLAAGHISMRHGLQGPNHSVSTACTTGAHSIGDAYRFIIHNDADMMICGGSESCIHPVAIGGFARAKSLAT 230 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6150.13865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6150.13865.1 >prot_H-paniculata_contig6150.13865.1 ID=prot_H-paniculata_contig6150.13865.1|Name=mRNA_H-paniculata_contig6150.13865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=251bp MLPPPAVIKQRRVVVTGLGAVTPLANGMQATWDGLLGGKCGIKRMRPSAAback to top mRNA from alignment at H-paniculata_contig6150:102..10735- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6150.13865.1 ID=mRNA_H-paniculata_contig6150.13865.1|Name=mRNA_H-paniculata_contig6150.13865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10634bp|location=Sequence derived from alignment at H-paniculata_contig6150:102..10735- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6150:102..10735- >mRNA_H-paniculata_contig6150.13865.1 ID=mRNA_H-paniculata_contig6150.13865.1|Name=mRNA_H-paniculata_contig6150.13865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1506bp|location=Sequence derived from alignment at H-paniculata_contig6150:102..10735- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |