prot_H-paniculata_contig61448.13853.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61448.13853.1
Unique Nameprot_H-paniculata_contig61448.13853.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length61
Homology
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Match: A0A6H5KDR1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDR1_9PHAE)

HSP 1 Score: 70.5 bits (171), Expect = 1.010e-12
Identity = 36/61 (59.02%), Postives = 45/61 (73.77%), Query Frame = 0
Query:    1 IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQDFGFEQCLVDP 61
            +QS L  E++++L PG GTMS +VV LNKS+YGLKQASR +   LVS L+  GFEQ L DP
Sbjct:  293 VQSKLDHEVFMKLPPGCGTMSGKVVRLNKSLYGLKQASRTFYMRLVSDLKRIGFEQSLSDP 353          
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Match: A0A6H5JQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD0_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.800e-12
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQDFGFEQCLVDP 61
            +QS+L  E++++L PG G+MS +VV LNKS+YGLKQASR + + LVS L+  GFEQ + DP
Sbjct:  100 VQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDP 160          
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.950e-12
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQDFGFEQCLVDP 61
            +QS+L  E++++L PG G+MS +VV LNKS+YGLKQASR + + LVS L+  GFEQ + DP
Sbjct:  665 VQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDP 725          
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Match: A0A6H5KKK1_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKK1_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.950e-12
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQDFGFEQCLVDP 61
            +QS+L  E++++L PG G+MS +VV LNKS+YGLKQASR + + LVS L+  GFEQ + DP
Sbjct:  566 VQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDP 626          
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 69.7 bits (169), Expect = 1.960e-12
Identity = 34/61 (55.74%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQDFGFEQCLVDP 61
            +QS+L  E++++L PG G+MS +VV LNKS+YGLKQASR + + LVS L+  GFEQ + DP
Sbjct:  833 VQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDP 893          
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Match: A0A6H5JB16_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB16_9PHAE)

HSP 1 Score: 69.3 bits (168), Expect = 2.680e-12
Identity = 35/61 (57.38%), Postives = 46/61 (75.41%), Query Frame = 0
Query:    1 IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQDFGFEQCLVDP 61
            +QS L  E++++L PG G+MS +VV LNKS+YGLKQASR + + LVS L+  GFEQ L DP
Sbjct:  898 VQSKLDHEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSDLKRIGFEQSLSDP 958          
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Match: A0A6H5L3I1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3I1_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.650e-12
Identity = 33/61 (54.10%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQDFGFEQCLVDP 61
            +QS+L  E+++++ PG G+MS +VV LNKS+YGLKQASR + + LVS L+  GFEQ + DP
Sbjct:  797 VQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDP 857          
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.660e-12
Identity = 33/61 (54.10%), Postives = 47/61 (77.05%), Query Frame = 0
Query:    1 IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQDFGFEQCLVDP 61
            +QS+L  E+++++ PG G+MS +VV LNKS+YGLKQASR + + LVS L+  GFEQ + DP
Sbjct: 1007 VQSELDHEVFMKMPPGCGSMSEKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDP 1067          
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Match: A0A6H5L7Y4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y4_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 6.790e-12
Identity = 30/60 (50.00%), Postives = 43/60 (71.67%), Query Frame = 0
Query:    1 IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQDFGFEQCLVD 60
            ++S+L  ++Y+RL  G G +S  +V L KS+YGL+QASRQW  +L S L + GFEQC+ D
Sbjct:  521 VRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKSCLVELGFEQCMAD 580          
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Match: A0A6H5JFP7_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFP7_9PHAE)

HSP 1 Score: 65.9 bits (159), Expect = 7.960e-12
Identity = 32/60 (53.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:    1 IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQDFGFEQCLVD 60
            +QSDL  ++++RL  G G +S  +V LNKS+YGLKQASRQW   L   L   GF QCL D
Sbjct:   46 VQSDLGEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCLAD 105          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61448.13853.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KDR1_9PHAE1.010e-1259.02Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQD0_9PHAE1.800e-1255.74Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L3Y0_9PHAE1.950e-1255.74Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KKK1_9PHAE1.950e-1255.74Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JRL9_9PHAE1.960e-1255.74Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JB16_9PHAE2.680e-1257.38Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5L3I1_9PHAE3.650e-1254.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE3.660e-1254.10Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L7Y4_9PHAE6.790e-1250.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JFP7_9PHAE7.960e-1253.33Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 2..56
e-value: 8.5E-10
score: 38.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61448contigH-paniculata_contig61448:446..628 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61448.13853.1mRNA_H-paniculata_contig61448.13853.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61448 446..628 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61448.13853.1 ID=prot_H-paniculata_contig61448.13853.1|Name=mRNA_H-paniculata_contig61448.13853.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=61bp
IQSDLATEIYLRLLPGYGTMSNEVVLLNKSVYGLKQASRQWDQLLVSSLQ
DFGFEQCLVDP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2