prot_H-paniculata_contig6140.13849.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig6140.13849.1
Unique Nameprot_H-paniculata_contig6140.13849.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length338
Homology
BLAST of mRNA_H-paniculata_contig6140.13849.1 vs. uniprot
Match: A0A6H5L6L5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6L5_9PHAE)

HSP 1 Score: 181 bits (459), Expect = 2.520e-47
Identity = 178/315 (56.51%), Postives = 204/315 (64.76%), Query Frame = 0
Query:   24 GLGSLLRRGVKSRKVWGAGGGGGGTEALKAEADALRAEVEELSLELDDAEDRLRGQEVELYKAAEALKRQKASAQEREAAMSQEMQEFREMQADQKTVFLSNLEGMERSLKEKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEAEQTGARHRAWMRQAQARQAELEASSAQLAAALADAKRKAG-PGAAEVRGSVGGTPGAETRRSN-------VSARELRVAQEDLDSCQASLELEQERTRSLQQEVNALRHDLDAARATESVVERQRQEHANMAADALGE 330
            GLG LL  G  ++   G G      EAL+AEA+         SLEL+DAEDR   QE EL   AE LKRQKA+A          M+EFR +Q ++K VFL+NLE  ER LK+K++                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +  ARHR WMRQAQARQ ELEA++AQLAAALA+A RK   PGA E      G  G   RR +        S RE R   ++LDSCQASLELEQERTRSLQQEV  L+HDLD+ARATE+VVERQRQEHA MAAD+ G+
Sbjct:  440 GLGGLLGMGRGNKGAAGRGSRDDDEEALRAEAEDXXXXXXXXSLELEDAEDRXXXQEAELKTGAEKLKRQKAAAAXXXXXXXXXMEEFRVLQLEEKKVFLNNLEAAERKLKKKEREADEARAALSVVEVFAMEREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEARHRVWMRQAQARQTELEATAAQLAAALAEANRKKHQPGAEE-----SGGEGEGARRGDGAHGGARTSDREFRALADELDSCQASLELEQERTRSLQQEVGLLKHDLDSARATEAVVERQRQEHAKMAADSFGK 749          
BLAST of mRNA_H-paniculata_contig6140.13849.1 vs. uniprot
Match: D8LSA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSA0_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 1.030e-37
Identity = 159/310 (51.29%), Postives = 188/310 (60.65%), Query Frame = 0
Query:   24 GLGSLLRRGVKSRKVWGAGGGGGGTEALKAEADALRAEVEELSLELDDAEDRLRGQEVELYKAAEALKRQKASAQEREAAMSQEMQEFREMQADQKTVFLSNLEGMERSLKEKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEAEQTGARHRAWMRQAQARQAELEASSAQLAAALADAKRKAGPGAAEVRGSVGGTPGAETRRS---NVSARELRVAQEDLDSCQASLELEQERTRSLQQEVNALRHDLDAARATESVVERQRQEHANMAADALGE 330
            GLG LL  G  ++   G G   G  EAL+AEA+             +DAEDR           AE LKRQK +A ER+  M  EM++FR +Q ++K VFL+NLE  E+ L+EK++                     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     +  ARHRAWMRQAQARQ ELEA++AQLAAA     RK                            S RE R   ++LDSCQASLELEQERTRSL+QEV+ L+HDLD+ARATE+VVERQRQEHA MAAD+  +
Sbjct:  403 GLGGLLGMGRGNKGAAGRGNRDGDEEALRAEAEDXXXXXXXXXXXXEDAEDRXXXXXXXXKTGAEQLKRQKVAAAERQRTMEAEMEQFRVLQLEEKKVFLNNLEAAEQKLQEKERDADEARAALSALEALAMEREDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVEARHRAWMRQAQARQTELEATAAQLAAAXXXXNRKKHQXXXXXXXXXXXXXXXXXXXXXXVRTSDREFRALADELDSCQASLELEQERTRSLKQEVDLLKHDLDSARATEAVVERQRQEHAKMAADSFAK 712          
BLAST of mRNA_H-paniculata_contig6140.13849.1 vs. uniprot
Match: A0A7S2RPF0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RPF0_9STRA)

HSP 1 Score: 59.3 bits (142), Expect = 4.940e-6
Identity = 102/189 (53.97%), Postives = 123/189 (65.08%), Query Frame = 0
Query:   51 LKAEADALRAEVEELSLELDDAEDRLRGQEVELYKAAEALKRQKASAQEREAAMSQEMQEFREM-QADQKTVFLSNLEGMERSLKEKDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETEAEQTGARHRAWMRQAQARQAELEASSAQLAAALADAKRK 238
            LKAE   LR E + L L+L+DAEDRL GQ  EL  A EA+      A ERE  +  EM E ++  QAD+++  ++ L G +  + E +        XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       E   E   A+H  W R+AQ R+A LEAS+AQL  +LAD +RK
Sbjct:  170 LKAEVSRLRKEAKGLMLDLEDAEDRLEGQAQELKAAGEAIAAATRRAAEREMELGDEMSEMKKAKQADRESTIVA-LAGKDARVSELEASVSKGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAELRRVERGMEDAAAQHSTWRREAQRREATLEASNAQLTRSLADLQRK 357          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6140.13849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5L6L5_9PHAE2.520e-4756.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LSA0_ECTSI1.030e-3751.29Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2RPF0_9STRA4.940e-653.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 211..238
NoneNo IPR availableCOILSCoilCoilcoord: 268..309
NoneNo IPR availableCOILSCoilCoilcoord: 48..114
NoneNo IPR availableCOILSCoilCoilcoord: 126..146
NoneNo IPR availableCOILSCoilCoilcoord: 186..206

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig6140contigH-paniculata_contig6140:765..10083 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig6140.13849.1mRNA_H-paniculata_contig6140.13849.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig6140 765..10083 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig6140.13849.1 ID=prot_H-paniculata_contig6140.13849.1|Name=mRNA_H-paniculata_contig6140.13849.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=338bp
GYGKRASVGAEGVKGVSEGSGAGGLGSLLRRGVKSRKVWGAGGGGGGTEA
LKAEADALRAEVEELSLELDDAEDRLRGQEVELYKAAEALKRQKASAQER
EAAMSQEMQEFREMQADQKTVFLSNLEGMERSLKEKDQEISEARSALSAM
ETYAMEREDTATRLAHEKEELLEELKGARSGQDRSAEEMREALTRAETEA
EQTGARHRAWMRQAQARQAELEASSAQLAAALADAKRKAGPGAAEVRGSV
GGTPGAETRRSNVSARELRVAQEDLDSCQASLELEQERTRSLQQEVNALR
HDLDAARATESVVERQRQEHANMAADALGELVPVLLN*
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