mRNA_H-paniculata_contig6137.13845.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Match: D8LPQ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPQ3_ECTSI) HSP 1 Score: 461 bits (1187), Expect = 1.380e-142 Identity = 244/442 (55.20%), Postives = 312/442 (70.59%), Query Frame = 2
Query: 1298 LLLGFAASSLSWSPAAYGIDTVDNLDVSKYLGRWYQAYGNAFTAMTITRDSTCIAADYGMDEATGNITVINSDREHVPTGELNTIAGYAYGTGEENPGQLKVHLGQVPVDGDYWIVGLGPETFGPEGLYEWAIVSGPEALTLFVLVRDVEKFDEMFAQDVLLFVKSLGFTGPMIGPQRIVQEGCLPFDP------TTNTPNKGYSALRGSVSSPFSDVPSDEKFSSLSKERSSVLEGMVLENTLTRLGANVD-GIFA-----PVETVDVLDMDRYTGRWFQAYSSFTVATLLEQKGACVTADYAVNDDGSIAVTNTARAKTVGGELIQMKGYAYYVDETQAGQLMVHLDDVPVDAPYWVLALGDKDGDGPYPWAIVSDPVRAFLFVLVRDPKKFYGSAQEKEVLKLCKDLGFTTFWNFPRKTVQEGCSYTSTS-ATVTADDV 2584
L+L A S L+ I+TV +LDV+KY+GRWYQ YGN FTA ITRD TC+AADYG+D+ATGNITVINS+R VPTG L TI G+AYGTG NPGQLKVHLG VPVDGDYW+VGLGP+TFGP+ LY+WA+VSGP+A +LFVLVRDV +F++ +A+DVL FV LGFTG PQR++QEGCLPF P T NT K + V + D+ + + + V G + L+++ + + G ++ PVE V LD++RY+GRW+Q+Y+SFT TLLE++GACVTADY V DGS++V NTAR + GEL++M G+AY D ++ GQL VHLD +PVD PYWVLA+GD+ G G YPWAIVSDP RAFLFVLVRD + ++ +++ C++LGFT WN PRKTVQEGC+YT S A A+DV
Sbjct: 6 LVLALATSGLA-------IETVPDLDVAKYIGRWYQLYGNTFTAR-ITRDGTCVAADYGLDQATGNITVINSERIGVPTGRLQTIEGFAYGTGPSNPGQLKVHLGDVPVDGDYWVVGLGPDTFGPDSLYQWALVSGPDAESLFVLVRDVREFEKTYARDVLEFVAELGFTGRDKEPQRVIQEGCLPFTPSSDSTTTANTRKKKLDWV--DVLETLETLDWDKVGAGYASDED-VNAGSSWTDVLSQMQWDEEEGTWSLESWKPVEPVTELDINRYSGRWYQSYASFTAGTLLERQGACVTADYGVKADGSLSVVNTARTNSPDGELVEMTGHAYTKDASKPGQLTVHLDGLPVDGPYWVLAVGDEQGTGSYPWAIVSDPFRAFLFVLVRDTAQ-----EDTDLVAKCRELGFTAPWNSPRKTVQEGCTYTEVSPAEDVAEDV 431
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Match: A0A8B7YCF9_ACAPL (uncharacterized protein LOC110978570 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7YCF9_ACAPL) HSP 1 Score: 219 bits (558), Expect = 9.500e-59 Identity = 147/406 (36.21%), Postives = 210/406 (51.72%), Query Frame = 2
Query: 1352 IDTVDNLDVSKYLGRWYQAYGNAFTAMT-ITRDSTCIAADYGMDEATGNITVINSDREHVPTGELNTIAGYAYGTGEENPGQLKVHLGQVPVDGDYWIVGLGPETFGPEGLYEWAIVSGPEALTLFVLVRDVEKFDEMFAQDVLLFVKSLGFTGPMIGPQRIVQEGCLPFDPTTNTPNKGYSALRGSVSSPFSDVPSDEKFSSLSKERSSVLEGMVLENTLTRLGANVDGIFAPVETVDVLDMDRYTGRWFQAYSSFTVATLLEQKGACVTADYAVNDDGSIAVTNTARAKTVGGELIQMKGYAYYVDETQAGQLMVHLDDVPVDAPYWVLALGDKD-----GDGPYPWAIVSDPVRAFLFVLVRDPKKFYGSAQEKEVLKLCKDLGFTTFWNFPRKTVQ-EGCSY 2548
I TV LD+ Y+GRWYQ + N +T + + DS C ADY + T ++V N+ RE P G+ IAG+AY PG+LKV L VP GDY I+ LGP +G Y++A+V+ L+VL R+ F + +A++VL F+ G+ G + P LP TN GY G + S V SD ++ + + + V+ L G F+P +TV LD+ Y GRW+Q ++ V + E+ CVTADY +N + +I+V N + G +KGYAY ++ + GQL+V P+ PYWV+ LG K+ Y ++IVSDP+RA LFVL RDP F Q +VL+ K F F+N P +TVQ E C Y
Sbjct: 19 IPTVTKLDLKAYVGRWYQPFQNRWTKIVNVDLDSVCTTADYKIINQTF-VSVYNAGREGWPEGKRRDIAGFAYIPDPSQPGRLKVVLDGVPTAGDYLIIKLGPII---DGQYQYAVVTSSGDRALYVLARNPISFLDKYAEEVLKFLDDNGYRGFLKKP--------LPLLQATNC---GYPESSGGWLT--SCVLSDTEYKLYTARKMVKIFSAVVALCLAGTGLGAPAYFSPPKTVSELDVQSYLGRWYQMFADLVVVSTFERNADCVTADYGLNPNNTISVYNANTDGSPTGPRKAIKGYAYVPNKNEPGQLLVKFPVNPIPGPYWVIQLGPKETTWRNAQPQYQYSIVSDPMRAGLFVLARDPADFRSRFQA-DVLQWLKVNQFDHFYNKPIETVQTEACKY 406
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Match: UPI0018DA05B6 (uncharacterized protein LOC119736785 n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018DA05B6) HSP 1 Score: 217 bits (553), Expect = 2.630e-58 Identity = 148/406 (36.45%), Postives = 204/406 (50.25%), Query Frame = 2
Query: 1352 IDTVDNLDVSKYLGRWYQAYGNAFTAMT-ITRDSTCIAADYGMDEATGNITVINSDREHVPTGELNTIAGYAYGTGEENPGQLKVHLGQVPVDGDYWIVGLGPETFGPEGLYEWAIVSGPEALTLFVLVRDVEKFDEMFAQDVLLFVKSLGFTGPMIGPQRIVQEGCLPFDPTTNTPNKGYSALRGSVSSPFSDVPSDEKFSSLSKERSSVLEGMVLENTLTRLGANVDGIFAPVETVDVLDMDRYTGRWFQAYSSFTVATLLEQKGACVTADYAVNDDGSIAVTNTARAKTVGGELIQMKGYAYYVDETQAGQLMVHLDDVPVDAPYWVLALGDK-----DGDGPYPWAIVSDPVRAFLFVLVRDPKKFYGSAQEKEVLKLCKDLGFTTFWNFPRKTVQ-EGCSY 2548
I TV LD+ Y+GRWYQ Y N +T +T DS C ADY + T ++V N+ RE P G+ IAG+AY PG+LKV L VP GDY I+ +GP +G Y++A+V+ L+VL R+ F + +A++VL F+ G+ G + PQ ++Q N GY R E VL VL L G +P +TV LD++ Y GRW+Q ++ V + E+ CVTADYA+N + +I+V N + G +KGYAY D +Q GQL+V PV YWV+ LG K D D Y ++IV+D +RA LFVL RDP F Q +VL+ K F F+N P +TVQ + C Y
Sbjct: 19 IPTVSELDLKAYVGRWYQPYQNRWTKITNFDLDSVCTTADYKIINQTF-VSVYNAGREGWPEGKRRDIAGFAYIPDPSKPGRLKVVLEGVPAAGDYLIIKIGPII---DGQYQYAVVTSSGDRALYVLARNPISFLDKYAEEVLKFLDENGYQGFLKKPQPLLQ-----------ATNCGYPETR---------------------EIMDVLFAAVLALCLAGPSLAAPGYASPPKTVGELDLNSYLGRWYQMFADLVVDSTFERNAYCVTADYALNPNKTISVYNANTVGSPTGARNAIKGYAYVPDPSQPGQLLVKFPVTPVAGSYWVVQLGPKETTWRDSDPQYQYSIVTDSLRATLFVLARDPDDFRSRFQA-DVLQWLKSNQFDHFYNKPVETVQTDDCKY 387
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Match: A0A2B4SE72_STYPI (Apolipoprotein D n=1 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SE72_STYPI) HSP 1 Score: 160 bits (404), Expect = 7.590e-41 Identity = 78/155 (50.32%), Postives = 102/155 (65.81%), Query Frame = 2
Query: 1343 AYGIDTVDNLDVSKYLGRWYQAYGNAFTAMTITRDSTCIAADYGMDEATGNITVINSDREHVPTGELNTIAGYAYGTGEENPGQLKVHLGQVPVDGDYWIVGLGPETFGPEGLYEWAIVSGPEALTLFVLVRDVEKFDEMFAQDVLLFVKSLGFT 1807
A+GIDTV L+V+KYLGRWYQ YG+ T RD+ C+ ADY + + G + V+NS+R PTGE I GYAY + PG+LKVHLG PVD YW+V LGP TFG EGLY++++V+ +TLFVL RDV+ F F + V ++ GFT
Sbjct: 15 AFGIDTVPKLNVTKYLGRWYQMYGDPTVMATFERDAVCVTADYTLRKD-GKVGVLNSERLRTPTGEGKNITGYAYIPDPKEPGKLKVHLGGTPVDAPYWVVKLGPPTFGAEGLYQYSVVTDNLQITLFVLARDVDTFKSQFDEQVQSWLVENGFT 168
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Match: A0A7I8VUA1_9ANNE (DgyrCDS8130 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VUA1_9ANNE) HSP 1 Score: 164 bits (415), Expect = 2.450e-40 Identity = 128/401 (31.92%), Postives = 176/401 (43.89%), Query Frame = 2
Query: 1361 VDNLDVSKYLGRWYQAYGNAFTAMTITRDSTCIAADYGMDEATGNITVINSDREHVPTGELNTIAGYAYGTGEENPGQLKVHLGQVPVDG--DYWIVGLGPETFGPEGLYEWAIVSGPEALTLFVLVRDVEKFDEMFAQDVLLFVKSLGFTGPMIGPQRIVQEGCLPFDPTTNTPNKGYSALRGSVSSPFSDVPSDEKFSSLSKERSSVLEGMVLENTLTRLGANVDGIFAPVETVDVLDMDRYTGRWFQAYSSFTVATLLEQKGACVTADYAVNDDGSIAVTNTARAKTVGGELIQMKGYAYYVDETQAGQLMVHLDDVPVDAPYWVLALGDKDG--DGPYPWAIVSDPVRAFLFVLVRDPKKFYGSAQEKEVLKLCKDLGFTTFWNFPRKTVQEG-CSY 2548
V L + KY+GRW+ AY + F T RD C ADYG GN++V N+ R P G I+G A + E G V L VP +Y+++ LGP+TFGP YE+AI+S P L LFVL R++ F F +V F+++ G F+P N + + R VP +E L++DRY GRW+Q Y S V +++ G C A Y DG+I+V N R + G + G AY + G L V L VP APYWV+ LG K DG Y +A+VS+P + LFVL R+ F ++EV + GF + N R+ V G C Y
Sbjct: 29 VPELFLEKYVGRWFTAYTSQFVMDTTQRDGFCSTADYGF-RLDGNVSVFNAQRIRAPDGPARNISGKAIPS--ERVGVFTVRLNGVPTPPAPNYYVIKLGPQTFGPNKFYEYAIISEPTRLNLFVLARNISDFKTRFDAEVTDFLQAEG------------------FNPPGNPYVEQFQGSRCIYPKSRDIVPVNE-----------------------------------------LEVDRYYGRWYQIYGSKFVLDGVQRNGFCSVAIYGPLPDGNISVYNYQRQNSPSGPPYGLGGIAY--PSNRPGVLSVQLAGVPRIAPYWVIKLGPKTFGFDGYYEYALVSEPTKLNLFVLARNVDDF-NQRFDQEVRDFLDEEGFNSEDNPYRRVVHGGNCVY 364
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Match: UPI000F551639 (temperature-induced lipocalin-1-like n=1 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F551639) HSP 1 Score: 158 bits (399), Expect = 3.450e-40 Identity = 79/159 (49.69%), Postives = 105/159 (66.04%), Query Frame = 2
Query: 1331 WSPAAYGIDTVDNLDVSKYLGRWYQAYGNAFTAMTITRDSTCIAADYGMDEATGNITVINSDREHVPTGELNTIAGYAYGTGEENPGQLKVHLGQVPVDGDYWIVGLGPETFGPEGLYEWAIVSGPEALTLFVLVRDVEKFDEMFAQDVLLFVKSLGFT 1807
+S A+GIDTV +L+V+KYLGRWYQ Y + T RD+ C+ ADY + E G + V+NS+R PTGE I GYAY PG+LKVHLG VPVD YW+V LGP TFG EGLY++++V+ +TLFVL RDV+ F + ++V ++ GFT
Sbjct: 11 FSSCAFGIDTVPSLNVTKYLGRWYQMYADPSVMATFERDAVCVTADYTL-EKDGKVGVLNSERLRTPTGEGKNITGYAYIPDPNQPGKLKVHLGGVPVDAPYWVVKLGPPTFG-EGLYQYSVVTDNLQITLFVLARDVDTFKSQYDEEVRNWLTENGFT 167
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Match: A0A7I8VUX5_9ANNE (DgyrCDS8132 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VUX5_9ANNE) HSP 1 Score: 159 bits (401), Expect = 5.850e-39 Identity = 111/357 (31.09%), Postives = 165/357 (46.22%), Query Frame = 2
Query: 1433 TITRDSTCIAADYGMDEATGNITVINSDREHVPTGELNTIAGYAYGTGEENPGQLKVHLGQVPVDGDYWIVGLGPETFGPEGLYEWAIVSGPEALTLFVLVRDVEKFDEMFAQDVLLFVKSLGFTGPMIGPQRIVQEGCLPFDPTTNTPNKGYSALRGSVSSPFSDVPSDEKFSSLSKERSSVLEGMVLENTLTRLGANVDGIFAPVETVDVLDMDRYTGRWFQAYSSFTVATLLEQKGACVTADYAVNDDGSIAVTNTARAKTVGGELIQMKGYAYYVDETQAGQLMVHLDDVPVDAPYWVLALGDK--DGDGPYPWAIVSDPVRAFLFVLVRDPKKFYGSAQEKEVLKLCKDLGF 2497
TI R+ C DYG I+V+NS R P G+ ++GYAY T + G LKV +P++G+YWIV LGP+ FG + LYE++I++ P L ++V+ RD F + + ++V ++K GF R F+ KG G + +D P+ V+ +++ +Y GRW+QAY+S E+ G C TADY + + SI+V N R + G + GYAY D + G L V +P YW++ LG K +G Y +AIVS+P + LFVL RDP+ F+ +KEV GF
Sbjct: 3 TIERNGVCPFVDYG-PLPDNKISVLNSMRLKEPKGKEVNVSGYAYPT--KRTGILKVKFKSIPIEGNYWIVKLGPQAFGEKNLYEYSIITDPTRLFMWVIARDPVTFKKKYDKEVREYLKKEGFN-------RF-------FNRFVENYQKGDCLYGGEKN-------------------------------------QLDSNNKPIVPVNEVNLKKYIGRWYQAYASKFAIERTERNGFCCTADYKILSESSISVFNAMRIGSPTGPPSNISGYAYTTD--RPGVLKVKFYRIPYPGNYWIIKLGPKIYGSEGLYEYAIVSEPTKRNLFVLARDPESFFDK-YDKEVRDFLISQGF 302
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Match: UPI000F555A3B (temperature-induced lipocalin-1-like n=2 Tax=Pocillopora damicornis TaxID=46731 RepID=UPI000F555A3B) HSP 1 Score: 153 bits (386), Expect = 1.980e-38 Identity = 75/157 (47.77%), Postives = 105/157 (66.88%), Query Frame = 2
Query: 1343 AYGIDTVDNLDVSKYLGRWYQAYGNAFTAMTITRDSTCIAADYGM--DEATGNITVINSDREHVPTGELNTIAGYAYGTGEENPGQLKVHLGQVPVDGDYWIVGLGPETFGPEGLYEWAIVSGPEALTLFVLVRDVEKFDEMFAQDVLLFVKSLGFT 1807
A+GIDTV +L+V+KYLGRWYQ Y + +T R+ C+ ADY + DE G V+N R PTG+ ++I GYAY T + PG+L +HL VP+ G YW+V LGP TFG +GLY++++V+G + + LFVL RDVE F + ++V F+K GFT
Sbjct: 15 AFGIDTVPSLNVTKYLGRWYQVYADPAVMVTSERNQVCVTADYSLRKDEKIG---VLNRGRLCKPTGKESSITGYAYMTNPDEPGKLTLHLDGVPILGSYWVVKLGPPTFGEKGLYQYSVVTGSKQIMLFVLTRDVETFKSQYDEEVRSFLKENGFT 168
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Match: A7SH61_NEMVE (Predicted protein n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7SH61_NEMVE) HSP 1 Score: 149 bits (377), Expect = 2.830e-37 Identity = 78/167 (46.71%), Postives = 100/167 (59.88%), Query Frame = 2
Query: 2051 VETVDVLDMDRYTGRWFQAYSSFTVATLLEQKGACVTADYAVNDDGSIAVTNTARAKTVGGELIQMKGYAYYVDETQAGQLMVHLDDVPVDAPYWVLALGDKDGDGPYPWAIVSDPVRAFLFVLVRDPKKFYGSAQEKEVLKLCKDLGFTTFWNFPRKTVQ-EGCSY 2548
++TV L++ Y GRW+Q YS F V E+ CVTADY + DG I V N+ R K GEL Q+ GYAY D G+L VH D VPV+ YW+L LG G G Y ++IV+D ++A LFVL RDP + +KE+ + K+ GFT WN PRKT Q E C Y
Sbjct: 19 IDTVPTLNVTSYLGRWYQMYSDFIVEETFERNAVCVTADYTLRKDGKIGVVNSNRDKKPDGELKQITGYAYQPDPEVPGKLKVHFDTVPVEGSYWILKLGPVSG-GQYQYSIVTDGLKATLFVLSRDPNNY--EKYDKEIQEFLKNNGFTHLWNKPRKTYQSEDCKY 182
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Match: A0A2B4SGV8_STYPI (Outer membrane lipoprotein Blc n=2 Tax=Stylophora pistillata TaxID=50429 RepID=A0A2B4SGV8_STYPI) HSP 1 Score: 151 bits (381), Expect = 4.340e-37 Identity = 74/155 (47.74%), Postives = 102/155 (65.81%), Query Frame = 2
Query: 1343 AYGIDTVDNLDVSKYLGRWYQAYGNAFTAMTITRDSTCIAADYGMDEATGNITVINSDREHVPTGELNTIAGYAYGTGEENPGQLKVHLGQVPVDGDYWIVGLGPETFGPEGLYEWAIVSGPEALTLFVLVRDVEKFDEMFAQDVLLFVKSLGFT 1807
A+GIDTV +L+V+KYLGRWYQ Y + T R++ C+ ADY + + G I V+N R + PTGE ++I GYAY T + PG+L +HL VP G YW+V LGP TFG EGLY++++V+ + LFVL RDVE F + ++V F+ GFT
Sbjct: 68 AFGIDTVPSLNVTKYLGRWYQMYADPAVMETSERNAVCVTADYSLRKD-GKIGVLNRGRLYTPTGEESSITGYAYMTDPKEPGKLTLHLDGVPFLGSYWVVKLGPPTFGVEGLYQYSVVTDSTQIMLFVLTRDVETFRNQYDEEVKSFLAENGFT 221 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig6137.13845.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6137.13845.1 >prot_H-paniculata_contig6137.13845.1 ID=prot_H-paniculata_contig6137.13845.1|Name=mRNA_H-paniculata_contig6137.13845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=463bp MRTNLLLGFAASSLSWSPAAYGIDTVDNLDVSKYLGRWYQAYGNAFTAMTback to top mRNA from alignment at H-paniculata_contig6137:2..12122- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig6137.13845.1 ID=mRNA_H-paniculata_contig6137.13845.1|Name=mRNA_H-paniculata_contig6137.13845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12121bp|location=Sequence derived from alignment at H-paniculata_contig6137:2..12122- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig6137:2..12122- >mRNA_H-paniculata_contig6137.13845.1 ID=mRNA_H-paniculata_contig6137.13845.1|Name=mRNA_H-paniculata_contig6137.13845.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2778bp|location=Sequence derived from alignment at H-paniculata_contig6137:2..12122- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |