prot_H-paniculata_contig61324.13841.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61324.13841.1
Unique Nameprot_H-paniculata_contig61324.13841.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
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BLAST of mRNA_H-paniculata_contig61324.13841.1 vs. uniprot
Match: A0A6H5K033_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K033_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 6.480e-12
Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0 
Query:    1 ITVCLTSSVVIAQDHCIGVCESIRGELSSTDACAKARKILPRPKIGRVCQVGKGERSNI 59
            +T+C    V  A D C  +C+ I+ E+SS++ACAK+RK LPRPKIGRVCQ G  E  N+
Sbjct:   14 LTLCADGIVRSAGDQCSTICDLIKAEVSSSEACAKSRKSLPRPKIGRVCQEGFDEAFNL 72
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BLAST of mRNA_H-paniculata_contig61324.13841.1 vs. uniprot
Match: D7FTQ9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ9_ECTSI)

HSP 1 Score: 67.0 bits (162), Expect = 1.650e-11
Identity = 30/59 (50.85%), Postives = 41/59 (69.49%), Query Frame = 0 
Query:    1 ITVCLTSSVVIAQDHCIGVCESIRGELSSTDACAKARKILPRPKIGRVCQVGKGERSNI 59
            +T+C    V  A D C  +C+ I+ E+SS++ACAK+R+ LPRPKIGRVCQ G  E  N+
Sbjct:   14 LTLCADGIVRSAGDQCSTICDLIKAEVSSSEACAKSRRSLPRPKIGRVCQEGFDEAFNL 72
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61324.13841.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K033_9PHAE6.480e-1252.54Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTQ9_ECTSI1.650e-1150.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61324contigH-paniculata_contig61324:468..647 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61324.13841.1mRNA_H-paniculata_contig61324.13841.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61324 468..647 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61324.13841.1 ID=prot_H-paniculata_contig61324.13841.1|Name=mRNA_H-paniculata_contig61324.13841.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
ITVCLTSSVVIAQDHCIGVCESIRGELSSTDACAKARKILPRPKIGRVCQ
VGKGERSNI*
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