prot_H-paniculata_contig61315.13839.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61315.13839.1
Unique Nameprot_H-paniculata_contig61315.13839.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length60
Homology
BLAST of mRNA_H-paniculata_contig61315.13839.1 vs. uniprot
Match: A0A836CH47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CH47_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 1.230e-6
Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 0
Query:    2 YDDQAFSVVKPTCIDSQFSHVHEIGHNLGCLHDRGDHEADELTSYSHATRYCDDDFQP 59
            + + A+SVV   C  +QFSH+HEIGHN+G  HD G+ +A     Y+   RYC  +  P
Sbjct:  221 FREYAYSVVYGGCF-AQFSHIHEIGHNMGARHDVGNTDASATWPYAMGYRYCSGEVDP 277          
BLAST of mRNA_H-paniculata_contig61315.13839.1 vs. uniprot
Match: A0A1I0YIU1_9CELL (Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchored membrane family protein n=2 Tax=Cellulomonas marina TaxID=988821 RepID=A0A1I0YIU1_9CELL)

HSP 1 Score: 53.1 bits (126), Expect = 1.290e-6
Identity = 24/48 (50.00%), Postives = 28/48 (58.33%), Query Frame = 0
Query:    1 GYDDQAFSVVKPTCIDSQFSHVHEIGHNLGCLHDRGDHEADELTSYSH 48
            GY   AFSVV  +C  SQ+S  HE+GHN G  HDRGD     L  Y +
Sbjct:  443 GYAGLAFSVVARSCATSQYSFTHELGHNFGAAHDRGDWSGTPLADYGY 490          
BLAST of mRNA_H-paniculata_contig61315.13839.1 vs. uniprot
Match: A0A6H5JF50_9PHAE (LNR domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF50_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 3.320e-6
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 0
Query:    7 FSVVKPTCIDSQFSHVHEIGHNLGCLHDRGDHEADELTSYSHATRYC 53
            FS+V   C D+ FSH HEI HN+GC HDR + E  +   Y H  RYC
Sbjct:  472 FSLVGSNCFDN-FSHTHEIAHNMGCYHDRDNSETQD--EYRHGYRYC 515          
BLAST of mRNA_H-paniculata_contig61315.13839.1 vs. uniprot
Match: A0A6H5JRC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRC1_9PHAE)

HSP 1 Score: 51.6 bits (122), Expect = 4.530e-6
Identity = 23/48 (47.92%), Postives = 31/48 (64.58%), Query Frame = 0
Query:    7 FSVVKPTCIDSQFSHVHEIGHNLGCLHDRGDHEADELTSYSHATRYCD 54
            FS+V   C D+ FSH HEI HN+GC HD+ +  +D   +Y H  RYC+
Sbjct:  292 FSLVDSNCFDN-FSHTHEIAHNMGCYHDKNN--SDTQHAYRHGWRYCE 336          
BLAST of mRNA_H-paniculata_contig61315.13839.1 vs. uniprot
Match: A0A7W1VVG7_9BACT (Immunoglobulin domain-containing protein n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A7W1VVG7_9BACT)

HSP 1 Score: 50.8 bits (120), Expect = 8.440e-6
Identity = 22/51 (43.14%), Postives = 30/51 (58.82%), Query Frame = 0
Query:    2 YDDQAFSVVKPTCIDSQFSHVHEIGHNLGCLHDRGDHEADELTSYSHATRY 52
            ++  AFS V  TC    +S  HE+GHN+GC HDR +     L SYS+  R+
Sbjct:  305 FESHAFSTVHYTCATGYYSFGHELGHNMGCRHDRQNSSGSGLDSYSYGWRF 355          
BLAST of mRNA_H-paniculata_contig61315.13839.1 vs. uniprot
Match: D8LLU0_ECTSI (PKD domain protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLU0_ECTSI)

HSP 1 Score: 49.3 bits (116), Expect = 2.910e-5
Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 0
Query:    7 FSVVKPTCIDSQFSHVHEIGHNLGCLHDRGDHEADELTSYSHATRYC 53
            FS++   C  S ++  HEIGHNLGC HDR D+    +T+Y H  RYC
Sbjct:  338 FSLMDSICF-SNWTQTHEIGHNLGCRHDR-DNSNTGMTAYGHGLRYC 382          
BLAST of mRNA_H-paniculata_contig61315.13839.1 vs. uniprot
Match: A0A836CMI7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMI7_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 4.050e-5
Identity = 24/49 (48.98%), Postives = 31/49 (63.27%), Query Frame = 0
Query:    7 FSVVKPTCIDSQFSHVHEIGHNLGCLHDRGDHEADELTSYSHATRYCDD 55
            FSVV   CI S +SH+HEIGHN+GC H+  +     + SY    RYC+D
Sbjct:  358 FSVVYSDCIVS-YSHIHEIGHNMGCQHNAENSGDATMWSYGVGYRYCND 405          
BLAST of mRNA_H-paniculata_contig61315.13839.1 vs. uniprot
Match: D8LMP2_ECTSI (Peptidyl-Asp metallopeptidase. metallo peptidase. MEROPS family M72 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMP2_ECTSI)

HSP 1 Score: 47.4 bits (111), Expect = 8.200e-5
Identity = 23/53 (43.40%), Postives = 31/53 (58.49%), Query Frame = 0
Query:    1 GYDDQAFSVVKPTCIDSQFSHVHEIGHNLGCLHDRGDHEADELTSYSHATRYC 53
            G  +  FS+V   C D+ FSH HEI HN+GC HDR +    +  ++ H  RYC
Sbjct:  125 GNAEYGFSLVGSNCFDN-FSHTHEIAHNMGCYHDRLNSGPQD--AFRHGYRYC 174          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61315.13839.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A836CH47_9STRA1.230e-643.10Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A1I0YIU1_9CELL1.290e-650.00Ser-Thr-rich glycosyl-phosphatidyl-inositol-anchor... [more]
A0A6H5JF50_9PHAE3.320e-651.06LNR domain-containing protein n=2 Tax=Ectocarpus s... [more]
A0A6H5JRC1_9PHAE4.530e-647.92Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7W1VVG7_9BACT8.440e-643.14Immunoglobulin domain-containing protein n=1 Tax=V... [more]
D8LLU0_ECTSI2.910e-548.94PKD domain protein n=1 Tax=Ectocarpus siliculosus ... [more]
A0A836CMI7_9STRA4.050e-548.98Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LMP2_ECTSI8.200e-543.40Peptidyl-Asp metallopeptidase. metallo peptidase. ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR024079Metallopeptidase, catalytic domain superfamilyGENE3D3.40.390.10coord: 2..57
e-value: 3.1E-5
score: 25.9
NoneNo IPR availableSUPERFAMILY55486Metalloproteases ("zincins"), catalytic domaincoord: 15..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61315contigH-paniculata_contig61315:453..632 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61315.13839.1mRNA_H-paniculata_contig61315.13839.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61315 453..632 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61315.13839.1 ID=prot_H-paniculata_contig61315.13839.1|Name=mRNA_H-paniculata_contig61315.13839.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp
GYDDQAFSVVKPTCIDSQFSHVHEIGHNLGCLHDRGDHEADELTSYSHAT
RYCDDDFQP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024079MetalloPept_cat_dom_sf