prot_H-paniculata_contig613.13836.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_H-paniculata_contig613.13836.1
Unique Name	prot_H-paniculata_contig613.13836.1
Type	polypeptide
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length	223

Homology

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BLAST of mRNA_H-paniculata_contig613.13836.1 vs. uniprot
Match: A0A6H5JK37_9PHAE (Protein kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK37_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 1.570e-17
Identity = 52/123 (42.28%), Postives = 69/123 (56.10%), Query Frame = 0

Query:   15 KGGMVD---WPKLARGVRFEGLSGTVELDENGDRKGMDVAFWYLQDQTFEGVSYLSGSEAARYSSATGKIQLLRQIPWAAGQVSDATSPXXXXXXXXXXXXXXXVTVDGGDRRRASPNMAHIG 134
            +GGMV    W  LA GV FEGLSG +E+D+ G+RKGMDV+F  ++  T  G+S++SG EAARY SA+  +QLLRQ+ W A   +    P                  DGG RR  S   + +G
Sbjct:  457 RGGMVGDGGWAGLAAGVGFEGLSGKLEMDDLGNRKGMDVSFRLMEGVTAYGISFVSGKEAARYDSASETVQLLRQMQWPASLSAVTACPGALP--------------DGGGRRPPSRTQSTLG 565

[Close]

BLAST of mRNA_H-paniculata_contig613.13836.1 vs. uniprot
Match: D8LN78_ECTSI (Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN78_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 1.790e-16
Identity = 43/82 (52.44%), Postives = 56/82 (68.29%), Query Frame = 0

Query:   10 GQRHSKGGMVDWPKLARGVRFEGLSGTVELDENGDRKGMDVAFWYLQDQTFEGVSYLSGSEAARYSSATGKIQLLRQIPWAA 91
            G+R  + G   W  LA GV FEGLSG VE+D+ G+R GMDV+F  ++  T +G SY+SG EAARY SA+  +QLLR + W A
Sbjct:  473 GRRVGRVGDGGWAGLAAGVGFEGLSGKVEMDDLGNRMGMDVSFRLMEGVTADGASYVSGKEAARYDSASETVQLLRHMQWPA 554

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig613.13836.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig613.13836.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JK37_9PHAE	1.570e-17	42.28	Protein kinase domain-containing protein n=1 Tax=E...	[more]
D8LN78_ECTSI	1.790e-16	52.44	Tyrosine kinase specific for activated (GTP-bound)...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..132
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 156..160
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 185..223
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 161..184
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 133..155
None	No IPR available	TMHMM	TMhelix		coord: 163..185
IPR028082	Periplasmic binding protein-like I	SUPERFAMILY	53822	Periplasmic binding protein-like I	coord: 26..71

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig613	contig	H-paniculata_contig613:18330..20569 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig613.13836.1	mRNA_H-paniculata_contig613.13836.1	Halopteris paniculata Hal_grac_a_UBK monoicous	mRNA	H-paniculata_contig613 18330..20570 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_H-paniculata_contig613.13836.1 ID=prot_H-paniculata_contig613.13836.1|Name=mRNA_H-paniculata_contig613.13836.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=223bp
EIEGDEGGRGQRHSKGGMVDWPKLARGVRFEGLSGTVELDENGDRKGMDV
AFWYLQDQTFEGVSYLSGSEAARYSSATGKIQLLRQIPWAAGQVSDATSP
PSSSAAAAAAVAAEAVTVDGGDRRRASPNMAHIGLTTATGTTTTPLGGGP
SWLWFTTANGFLLLLAVCLVLPFAVGMVAFRFVFVAMQSTVATAAATATV
AATAFSAAPQQTAIEERGRRNGV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR028082	Peripla_BP_I