prot_H-paniculata_contig61293.13833.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61293.13833.1
Unique Nameprot_H-paniculata_contig61293.13833.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length278
Homology
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Match: A0A445HPU2_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445HPU2_GLYSO)

HSP 1 Score: 223 bits (567), Expect = 1.620e-62
Identity = 123/276 (44.57%), Postives = 180/276 (65.22%), Query Frame = 0
Query:    2 KWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLLVAVYVDDLVIAGR-REKVDELKHNISQRFRMKDLGSLSRILGIEVRPDRPNDAITISQGSKIREVLQRYGFDECRGVPTPIDRKVKILAPEGRSGNSTENRGMVGSLMYASTGTRPDIAYAVHQAAR 276
            K IF+RK+K DG+V +YKARLV QGF Q EG DFF T APVAR+ST+R + +LAA H+  +  MDV  A+LN  ++EE+++K P  F  P  +   V +L KSLYGLKQ+ + W+   D+ ++  G   +  D CLY   D  G+  +++ +YVDD++I G  +++VDE K  +S +F MKD+G    ILGI+++  R N+ I+ISQ   I ++L+++ F +C  V TPID  +K+L  +G + +  E    +GSLMYA   TRPDIAYAV + +R
Sbjct:  585 KMIFRRKMKVDGTVDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLMIHQMDVKTAFLNGELDEEIYMKQPEGFVMPGNENK-VCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKCLYSKFDTHGKG-VIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIK--RGNNGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKLLPNKGVAVSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSR 856          
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 217 bits (553), Expect = 2.990e-62
Identity = 119/279 (42.65%), Postives = 183/279 (65.59%), Query Frame = 0
Query:    1 TKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLLVAVYVDDLVIAGRRE-KVDELKHNISQRFRMKDLGSLSRILGIEVRPDRPNDAITISQGSKIREVLQRYGFDECRGVPTPID--RKVKILAPEGRSGNSTENRGMVGSLMYASTGTRPDIAYAVHQAAR 276
            +KW+F+ K   DG+V  +KARLVAQGFSQ  G+D+ +T +PVAR  ++RTV +LAA+H  +L  MDV  A+LN  ++EE+++K    F    ++   V RLR+S+YGLKQS R WN+ LD  L  MG   +T D C+Y  +++GGE ++ +AVYVDD+++AG+ + K++E+K  ++++F+MKD+G L   LG++V P   +  I I Q +  + VL+R+G +  +   TP++   K+K  A + +  +    +  VG L+Y ST TRPDIAYAV   AR
Sbjct:   28 SKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKEH-LVCRLRRSIYGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEIFI-IAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVAR 303          
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Match: A0A2U1QL30_ARTAN (Zinc finger, CCHC-type n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1QL30_ARTAN)

HSP 1 Score: 221 bits (563), Expect = 6.090e-62
Identity = 118/276 (42.75%), Postives = 180/276 (65.22%), Query Frame = 0
Query:    2 KWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLLVAVYVDDLVIAG-RREKVDELKHNISQRFRMKDLGSLSRILGIEVRPDRPNDAITISQGSKIREVLQRYGFDECRGVPTPIDRKVKILAPEGRSGNSTENRGMVGSLMYASTGTRPDIAYAVHQAAR 276
            KWIFKRK+K DG++ +YKARLV QGF Q EG D+F T APVAR+ST+R + +LAA H+  +  MDV  A+LN  ++EE+++K P  F  P  +   V +L KSLYGLKQ+ + W+   D+ ++  G   +  D C+Y S+ +     +++ +YVDD++I G  +++V+E K  +S +F MKD+G    ILGI++   R N  I+ISQ   I ++L ++ F +C  + TP+D ++K+L  +G++ +  E    +GSLMYA   TRPDIAYAV + +R
Sbjct:  870 KWIFKRKMKVDGTIDKYKARLVIQGFRQKEGIDYFDTYAPVARISTIRLLLALAAIHNLVIHQMDVKTAFLNGELDEEIYMKQPEGFVMPGHENK-VCKLVKSLYGLKQAPKQWHQKFDEIVLSNGFVLNQADKCVY-SKFEDSRNGVIICLYVDDMLIFGTNQDQVNETKEFLSSKFAMKDMGEAEVILGIKII--RENKGISISQSHYIEKILDKFNFKDCSPIGTPMDPQLKLLPNKGKAVSQLEYSKRIGSLMYAMISTRPDIAYAVGKLSR 1141          
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 214 bits (545), Expect = 2.350e-61
Identity = 112/278 (40.29%), Postives = 180/278 (64.75%), Query Frame = 0
Query:    2 KWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLLVAVYVDDLVIAGRR-EKVDELKHNISQRFRMKDLGSLSRILGIEVRPDRPNDAITISQGSKIREVLQRYGFDECRGVPTPIDRKVKILAP--EGRSGNSTENRGMVGSLMYASTGTRPDIAYAVHQAAR 276
            KW+FK K   DGS+ R+KARLVAQGFSQ  G D+ +T +PV R  ++RTV +L+ +   +L  MDV AA+LN  +E+E+++K P  F    ++     +L KSLYGLKQS R WN+ LD+ L  +G   + +D C+Y   +DG     +VA++VDD+++AG+  EK+ ++K +I++RF++KD+G L  ILG++V  +  +  + I Q +    ++++YG + C+ V TP+D   K+++   +    N  E++  VGSL+Y S+ TRPDI +AV+  A+
Sbjct:  193 KWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEH-LACKLNKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEEDGN--IFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAK 465          
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Match: A0A6L2LWU7_TANCI (Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2LWU7_TANCI)

HSP 1 Score: 209 bits (532), Expect = 1.050e-60
Identity = 113/273 (41.39%), Postives = 169/273 (61.90%), Query Frame = 0
Query:    2 KWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLLVAVYVDDLVIAGR-REKVDELKHNISQRFRMKDLGSLSRILGIEVRPDRPNDAITISQGSKIREVLQRYGFDECRGVPTPIDRKVKILAPEGRSGNSTENRGMVGSLMYASTGTRPDIAYAVHQ 273
            KWI KRK+K DGS+ +YKARLV QGF + EG +FF T APVAR++T+R + +L A HD  +  MDV  A+LN  ++EE+++K P  F     +   V +L+KSLYGLKQ+ + W+   D+ ++  G   +  D C+Y   DD G   +++ +YVDD++I G  +++VD+ K  +S +F MKDLG    ILGI ++  R N+ I++SQ   I ++L ++ F  C  V TP+D  V   +  G   +  E    +G LMYA   TRPDIA+A+ +
Sbjct:  134 KWILKRKIKVDGSIDKYKARLVIQGFRRKEGIEFFDTYAPVARITTIRLLLALTAIHDLVIHQMDVKTAFLNGDLDEEIYMKQPEGFVMSGYENK-VCKLKKSLYGLKQALKQWHQKFDEVVLSNGFSLNQADKCVYSRFDDSGNG-VIIYLYVDDMLIFGTDQDQVDKTKELLSSKFDMKDLGEAEVILGIRIK--RGNNGISVSQSHYIEKILAKFNFANCSPVSTPVDPTVMFRSNNGTPVSQLEYSRAIGCLMYAMISTRPDIAFAIRK 402          
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 217 bits (553), Expect = 1.390e-60
Identity = 115/271 (42.44%), Postives = 172/271 (63.47%), Query Frame = 0
Query:    2 KWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLLVAVYVDDLVIAGR-REKVDELKHNISQRFRMKDLGSLSRILGIEVRPDRPNDAITISQGSKIREVLQRYGFDECRGVPTPIDRKVKILAPEGRSGNSTENRGMVGSLMYASTGTRPDIAYAV 271
            KW+FK K   DGS+ +YKARLVA+GF+QVEG D+  T APV++ +++RTV +LAA +D ++  MDV +A+LN  ++EE+++  PP F     D   V RLRKSLYGLKQ+ R W   +      +G + S  D  ++   ++G    L++A+YVDD++IAG  R  +D  K  +S+RF M DLGS   ILG+E+  DR    ++ISQ   I ++L+R+G   CR V TP++  +K+      + +    +  +GSLMYA  G+RPD+A+AV
Sbjct: 1036 KWVFKIKRGPDGSIEKYKARLVAKGFTQVEGIDYTDTFAPVSKFASIRTVLALAAMYDLDVDQMDVKSAFLNGDLDEEIYMTCPPGFD---HDAGSVWRLRKSLYGLKQASREWYKKIRSEFEDLGFERSDADHSIFVKVENG--VILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKPYQSALGSLMYAMLGSRPDLAFAV 1301          
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Match: A0A6S7IKL3_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IKL3_PARCT)

HSP 1 Score: 215 bits (547), Expect = 1.440e-60
Identity = 118/279 (42.29%), Postives = 183/279 (65.59%), Query Frame = 0
Query:    1 TKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLLVAVYVDDLVIAGRRE-KVDELKHNISQRFRMKDLGSLSRILGIEVRPDRPNDAITISQGSKIREVLQRYGFDECRGVPTPID--RKVKILAPEGRSGNSTENRGMVGSLMYASTGTRPDIAYAVHQAAR 276
            +KW+F+ K   DG+V  +KARLVAQGFSQ  G+D+ +T +PVAR  ++RTV +LAA+H  +L  MDV  A+LN  ++EE+++K P  F    ++   V RLR+S+YGLK+S R WN+ LD  L  MG   +T D C+Y  +++GGE ++ +AVYVDD+++AG+ + K++E+K  ++++F+MKD+G L   LG++V     +  I I Q +  + VL+R+G +  +   TP++   K+K  A + +  +    +  VG L+Y ST TRPDIAYAV   AR
Sbjct:  558 SKWVFRIKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIEKGKEH-LVCRLRRSIYGLKKSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEIFI-IAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKEADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVAR 833          
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT)

HSP 1 Score: 211 bits (538), Expect = 1.900e-60
Identity = 117/279 (41.94%), Postives = 181/279 (64.87%), Query Frame = 0
Query:    1 TKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLLVAVYVDDLVIAGRRE-KVDELKHNISQRFRMKDLGSLSRILGIEVRPDRPNDAITISQGSKIREVLQRYGFDECRGVPTPID--RKVKILAPEGRSGNSTENRGMVGSLMYASTGTRPDIAYAVHQAAR 276
            +KW+F+ K   DG+V  +KARLVAQGFSQ  G+D+ +T +PVAR  ++RTV +LAA+H  +L  MDV  A+LN  ++EE+++K P  F    ++   V RLR+S+ GLKQS R WN+ LD  L  MG   +T D C+Y  +++GGE ++ +AVYVDD+++AG+ + K++E+K  ++++F+MKD+G     LG++V     +  I I Q +  + VL+R+G +  +   TP++   K+K  A + +  +    +  VG L+Y ST TRPDIAYAV   AR
Sbjct:  176 SKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKEH-LVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV-KEEGGEIFI-IAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRVDQVNYQCAVGHLLYLSTKTRPDIAYAVSDVAR 451          
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Match: C6JRI2_SORBI (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sorghum bicolor TaxID=4558 RepID=C6JRI2_SORBI)

HSP 1 Score: 212 bits (539), Expect = 3.240e-60
Identity = 113/276 (40.94%), Postives = 172/276 (62.32%), Query Frame = 0
Query:    2 KWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLLVAVYVDDLVIAGRREKV-DELKHNISQRFRMKDLGSLSRILGIEVRPDRPNDAITISQGSKIREVLQRYGFDECRGVPTPIDRKVKILAPEGRSGNSTENRGMVGSLMYASTGTRPDIAYAVHQAAR 276
            KW+FK+KL+ DG++ +YKARLVA+G++Q EGED+F T +PVAR++T+R + SLAA H F +  MDV  A+LN  +EEE+++  P  F    ++   V +L KSLYGLKQ+ + W+   D  L   G   +  D C+Y+ R  GG+  +L  +YVDD++I G   KV  E+K  +S  F MKDLG    I+ I++  +  N  +T+ Q   + +VL R+G+ EC   PTP D  V++      + +      ++GSLMY ++ TRPDI++AV + +R
Sbjct:  233 KWVFKKKLRPDGTIEKYKARLVAKGYTQKEGEDYFDTYSPVARLTTIRVLLSLAASHGFLIHQMDVKTAFLNGELEEEIYMDQPDGFIANGQEGK-VCKLLKSLYGLKQAPKQWHEKFDKTLTSAGFAVNEADKCVYY-RFGGGDGVIL-CLYVDDILIFGNNLKVIKEVKEFLSNNFEMKDLGEADVIVNIKLSREEGNGWVTLMQSHYVEKVLNRFGYSECTPAPTPYDPSVRLRKNHRIARDQLRYSQIIGSLMYLASATRPDISFAVSKLSR 505          
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Match: A0A2U1PVD2_ARTAN (Zinc finger, CCHC-type n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1PVD2_ARTAN)

HSP 1 Score: 216 bits (549), Expect = 4.370e-60
Identity = 117/273 (42.86%), Postives = 174/273 (63.74%), Query Frame = 0
Query:    2 KWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRTVFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRRLRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLLVAVYVDDLVIAGR-REKVDELKHNISQRFRMKDLGSLSRILGIEVRPDRPNDAITISQGSKIREVLQRYGFDECRGVPTPIDRKVKILAPEGRSGNSTENRGMVGSLMYASTGTRPDIAYAVHQ 273
            KWIFK+ +K DG++ ++KARLV QGF Q  G D+F T A VAR+ST+R + +L+A HD  +  MDV  A+LN  +EEE+++  P  F  P  +   V +L KSLYGLKQ+ + W+   D+ ++  G   + +D C+Y SR D   + +++ +YVDD++I G  +++VDE K  +S +F MKD+G    ILGI ++  R +  I I+Q   I ++L+R+ + EC  V TP+D  VK++  +G   +  E   +VGSLMYA T TRPDIAY V Q
Sbjct:  722 KWIFKKNMKVDGTIDKFKARLVIQGFKQKPGIDYFDTYATVARISTIRLLIALSAIHDLIVHQMDVKTAFLNGDLEEEVYMNQPEGFVMPGNEHK-VCKLVKSLYGLKQTPKQWHQKFDEVILSSGFSLNQSDKCIY-SRFDSSCSGVIICLYVDDMLIFGTDQQQVDETKDLLSSKFSMKDMGEADVILGIRIK--RADKGIAITQSHYIEKMLKRFNYSECSPVSTPMDSSVKLMLNKGMGISQLEYSQVVGSLMYAMTSTRPDIAYDVGQ 990          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61293.13833.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A445HPU2_GLYSO1.620e-6244.57Retrovirus-related Pol polyprotein from transposon... [more]
A0A7D9KES8_PARCT2.990e-6242.65Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A2U1QL30_ARTAN6.090e-6242.75Zinc finger, CCHC-type n=1 Tax=Artemisia annua Tax... [more]
A0A7D9HZ03_PARCT2.350e-6140.29Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6L2LWU7_TANCI1.050e-6041.39Zinc finger, CCHC-type n=1 Tax=Tanacetum cinerarii... [more]
A0A1M2VV58_TRAPU1.390e-6042.44Retrovirus-related Pol polyprotein from transposon... [more]
A0A6S7IKL3_PARCT1.440e-6042.29Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7JEY7_PARCT1.900e-6041.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
C6JRI2_SORBI3.240e-6040.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2U1PVD2_ARTAN4.370e-6042.86Zinc finger, CCHC-type n=1 Tax=Artemisia annua Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..230
e-value: 6.0E-59
score: 199.6
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 2..201
NoneNo IPR availablePANTHERPTHR11439:SF273coord: 2..201
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 12..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61293contigH-paniculata_contig61293:5..919 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61293.13833.1mRNA_H-paniculata_contig61293.13833.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61293 5..919 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61293.13833.1 ID=prot_H-paniculata_contig61293.13833.1|Name=mRNA_H-paniculata_contig61293.13833.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=278bp
TKWIFKRKLKEDGSVARYKARLVAQGFSQVEGEDFFKTSAPVARMSTLRT
VFSLAAEHDFELKGMDVGAAYLNAPVEEELFVKLPPQFSPPSRDIPFVRR
LRKSLYGLKQSGRNWNNTLDDFLVGMGLDPSTTDSCLYFSRDDGGETYLL
VAVYVDDLVIAGRREKVDELKHNISQRFRMKDLGSLSRILGIEVRPDRPN
DAITISQGSKIREVLQRYGFDECRGVPTPIDRKVKILAPEGRSGNSTENR
GMVGSLMYASTGTRPDIAYAVHQAARRM
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like