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Homology
BLAST of mRNA_H-paniculata_contig6118.13823.1 vs. uniprot
Match: A0A6H5JVI5_9PHAE (BHLH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVI5_9PHAE) HSP 1 Score: 134 bits (336), Expect = 9.210e-29 Identity = 155/431 (35.96%), Postives = 193/431 (44.78%), Query Frame = 3
Query: 996 GGKRALNPERMERKATREKRRREEVNEKFEQLLTVLEEAEATSGLEPPAPEDGQHA-NACINGRRVEVLHRTISVLRKLLHDRRQRTHHLVNAPAPICFEQPSSLKKQPPNPSPSPPSFCDGHGHNAIAAAIPPS-DVATPQRPA--GGASSEASPSVTTSGLTSSR----------SSESITLPEPTAQGH--------VVVPVQPPHGGHPHAHSTSMPVPTGFAMAYHPGMPMPPGAVSIPAGATGHMAAAAAAGVTGMHPNMQGRHAQPFFIAVPMFMPPGQGMGGTXXXXXXXXXXXXXXXXXXXXXXPAVPSPVPPPAA--AVTVAAQPSA---ASTSILAAD------EKSPCEGKAGFVGALTPMAGVPDVSTNVTL--GKPSWPMPGGVGFPPMM-LQMPQFVTQALTAQDGDEKVTHAMCA 2180
GGKR LNP+RMERKA+REKRRREEVNEKF+QLL VLEEAEATSGLEPPA +DG+ A +ACINGRRVEVL RTI V++KLL +RR+ L P P +L A+AA I T + P GG SE + + + I E A+G V G HS V + +HP M M PG +P GH + G+ G HP P F AVPM++P GQGM PP AA A T AA+ +A A+T++ A D + V GK +W +P G+G+ MM LQMPQFVTQAL+ ++G EK THA+CA
Sbjct: 210 GGKRPLNPDRMERKASREKRRREEVNEKFDQLLQVLEEAEATSGLEPPAAKDGKTAAHACINGRRVEVLSRTIQVVKKLLRERREA---LAGVPPPAD----DTLA--------------------AVAAGISNGWQEETAEGPVLDGGFRSEVEENXXXXXXXXXXXXXXXXXXXXTRDVIDSNEAAAEGADAQAEAAIAATMVXXXEGXXAKHHSVMHHVAMSVS-GHHPSMMMAPGFTGVP----GHPVPSPPHGIPG-HPG------GPIFFAVPMYIPQGQGM--------------------------------PPVAASTATTAAAEHAAQVPAATAVAAPSLAXXXXXXXXXXXXXXXXXXXXXXXXXXDATEAVPAPSGKKTWAVPAGMGYQSMMTLQMPQFVTQALSGEEGSEKPTHAVCA 569
BLAST of mRNA_H-paniculata_contig6118.13823.1 vs. uniprot
Match: D7FS24_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS24_ECTSI) HSP 1 Score: 60.1 bits (144), Expect = 1.550e-6 Identity = 27/44 (61.36%), Postives = 36/44 (81.82%), Query Frame = 3
Query: 2052 GKPSWPMPGGVGFPPMM-LQMPQFVTQALTAQDGDEKVTHAMCA 2180
GK +W +P G+G+ MM LQMPQFVTQAL+ ++G+EK THA+CA
Sbjct: 128 GKKTWAVPAGMGYQSMMTLQMPQFVTQALSGEEGNEKPTHAVCA 171
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | bHLH domain protein |
| Ec32 ortholog | Ec-16_004620.1 |
| Exons | 4 |
| Model size | 3763 |
| Cds size | 1917 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6118.13823.1 >prot_H-paniculata_contig6118.13823.1 ID=prot_H-paniculata_contig6118.13823.1|Name=mRNA_H-paniculata_contig6118.13823.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=639bp
MADSACVTIGGQSEQALGIGEDDGRQSDVEHADFDELLQSNVLDTLADFE
FSCGDLSALEPDAKAVCSSGGIRRRTFAASQTNALLTGAWEPTSGAYSHA
EQQPSAQPISHAAQQQQPRHNSSLADLVMGAGMECETTSAGGGRGGHESS
DLMIIQQSQQQQEHHKPSLVCGGGSPSSGDPSQRSSSPVFCGHGAQLDKV
PPGVAVAASAAAVGRDDGNSSSTQPQFNGVLRGKKRKSPGMGGGGKRALN
PERMERKATREKRRREEVNEKFEQLLTVLEEAEATSGLEPPAPEDGQHAN
ACINGRRVEVLHRTISVLRKLLHDRRQRTHHLVNAPAPICFEQPSSLKKQ
PPNPSPSPPSFCDGHGHNAIAAAIPPSDVATPQRPAGGASSEASPSVTTS
GLTSSRSSESITLPEPTAQGHVVVPVQPPHGGHPHAHSTSMPVPTGFAMA
YHPGMPMPPGAVSIPAGATGHMAAAAAAGVTGMHPNMQGRHAQPFFIAVP
MFMPPGQGMGGTGSAASAEASGESAPPVAPVAPMPAVPSPVPPPAAAVTV
AAQPSAASTSILAADEKSPCEGKAGFVGALTPMAGVPDVSTNVTLGKPSW
PMPGGVGFPPMMLQMPQFVTQALTAQDGDEKVTHAMCA* back to topmRNA from alignment at H-paniculata_contig6118:652..13027+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6118.13823.1 ID=mRNA_H-paniculata_contig6118.13823.1|Name=mRNA_H-paniculata_contig6118.13823.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12376bp|location=Sequence derived from alignment at H-paniculata_contig6118:652..13027+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGGCAAATGACCATGTTCTATGTATTTCCAGTCACTTGGGTTTTGCATAT
TCGGTTGGGCTTCCTGCATAAACGATGTGTTGTTAAACCCGAGGGTGAAA
GGAGTCGGGGTGCCAGAGAGAGTAGAGTACCTCTTTTTCTAGCGGCTGCA
CTTGGGAGGAAACCGTACTTTCGATTTGTGTCTATTCTGAGCACAGTGCA
TCAGCGCTGGCAGGCGCGGGGGTCTTGTTCCCTTAGTAACAAAAAAGAAA
ACGCTGGTTGGGTGGGATGGCTGATTCTGCATGCGTTACTATCGGGGGTC
AGTCGGAGCAGGCATTGGGAATTGGCGAGGACGATGGCCGCCAAAGTGAT
GTGGAGCACGCAGACTTCGACGAGTTGCTGCAGTCGAACGTGTTAGATAC
CCTGGCGGACTTGTAAGTAATGCAATGAAAGCAGAAATGATGTAAATGGC
GTTCGTGTCTGAAAACATTAAACTTTTCTCGAAATTTCTCTCGTTGATGG
GAAGGCTACTCGTTCTTAGGCGATGTTGATGGAAGAGGGTGTTGAGATGC
GTGCGAGCTACGGATTGTTGCCCCGTTGGAGTTCCTTCTCCTGATGCCGC
CAGCTTTCCATTACCTATGCTACCAACGCTATCCACCTTGTTCTTATCTC
GTAGTGTGGTATACCGAAACCCTTCATGAGCAGCTACTGAGAACTCTGTC
GCCTTGACGGGTGTGAATTTATGTGGGGCTGTATTTTTGTATTTTCGAGT
AGTTCAGTTTTCCCAGATTCGCGGAGCATCGCGGAGCATCGCGGACTCTT
AACACGCGCATCTGTGCGCGTCGAGCGTTCCTCGTATATGGTGCCTACGT
GGTTGATGTTGCAGCCCAAGGCATGCCGTTTACACAACAAGCGAAAAGAC
GCTTGAATCCTTGATCTGCTTGCCATTCTCGAGGAAAACACCGAGGTTTG
ACAAGAGTTGTGACAGACAGTGCCGCCTTTTGTCTGAAGTTCGTTCGAGG
TTGGGCTTCATAGATACAAAATCTGCTAGAAGTGTGCATGCTGTTTACGA
GCACTTCAGTTTGTCTCTCTCACTTTCTGATTATCATTTTTTTTGTGGTT
TCAGAAGATTGAAGGTCGAAGATTGACCCAGCACGACAGACAGTCGGCAA
GTCTTGAAGCTTCGATTCGTGACGCGTAAAACGTTTGTGTTGGCTCGACG
TCTCATAGTGAATGAATGTCGCGAGTATGAACAGAGTTAGTTCTCTCTGG
GGAAACTGTTCAGTTTAATGATTTTTATTGTTTACTGTTCACTGTTACAC
AGAACGACCATCTCTAGCATGTACGGATATAGTATGATGCGACAAACGTG
TCAGTGGATGGAATGTATAGTCAGTTACAGTCTGTTTACACAGATAATCA
GTATCCTCTTTTTTGTTGTTTTTCAAGCTTTGGTAGGTCCTCAACCATAA
AAACAGACAACGAACGCATCAGAGCGTCAGTTTCACAACCTTTTTTTTTT
AACATTGCAGTTGCCACAATTCATGCGCATTCTCATTGTTTGCTCTCTCC
GCTCACCACGAGACCAAAAACAACATCCCTCGAAAACGGTTGTCCACGAT
TGCCTCAACGCTCAACAATTTTTGTGTTTTTCAGCACAAAGCCGGACAAC
AGTAATCTTACATGTTAATAGGGTTGTGTCGGATGTATAGGTTGGTTACG
GTGATCATTGTGCAACACGCTGCGAAACATGTGTACTTTTGAGATCTGAA
ATTGTTTAGCGACCGGAATGCACAACCCAATCCCATCCGTACACCTGTAA
GAGTCTTTTCGATACTAAATTGAAGATTTCAAAGAATTAACAAAGTTTTT
GCGCAGAATATAAATTGGTTTCTCATTTTCAATTCGACGGCACATTCCAG
TTTGCAAAATGAAAATTAATTTCACTGTTGAAGGTACGTGATCTCTAAAT
CTCTGTGCGTCGGTAATGTTAGCGTGCGCGGATAATAACCGGTACCGGCT
ATTTCGTGTCACACGAGACTTGATTTTTTTTTTTAACGAGCCAACGACAA
CATAGACACGTTTCGACTCAGCCAGTTAACGGCAGCTATATTCTCCCGGC
TGGGAGTAAATAAGCAGCGCTGTCGCATCCAACTAACCTCTGGCCAGCAC
AGTTTTTATCAGATGTACACCATACCAAAGGACGCTAGATAGGCTCGACT
TCTTCGGGGTTTTCTGTTGAAGTTAGTGTTATGATTGGTTCGTTGAGTTG
GGTTTAGGCAGCGTTGTGTTGTTTGCAAAGACCTGCCTGCATAAAGTCCC
GAAATGGGTTCCTTGCAAGGCTTATATAATTGGAAACGGGAGCGCTGGTT
ATTCACTTTCGGCCGGGACTGCATGGCCGGCGCGGCGCGCTTCGCGCCCA
AACATGGTTCTTTTTCTTGTCTGGCTGCTGACCGTAATAGAAACGGCTCC
ATATTCTGGGTCGTGTGTGTATGTGTGTGTGTTCCCCCCAGGAATAAAGA
TTTATAGCTCACCAACCCCGGGTCAAGTAATTCTCGGCAGTAGCGTAGCG
TCGTGTGCGCGAACAAGGGAAGTAGGATTGATCGCTTAATTGAGAAATTC
GATCAGCTCGAATGTGCGCCCTTAGCGACGGCAAATAGTATTGAAAAAAA
AAAATGAACCCGAATATTCCGTCGTTTTTGGAGTCTTGCGTCATTCCCGA
CGGAACGAGTCGAAATTATGACCTCGTGTCAATCCGGACCACAACTTGAC
TGTCGTTAGGTCCCTGTGGACATGAACCAACCCCAAACGTTCAATACTAA
ACATCACCTTATAAGTTCTTGAATTATGATCAGTTGATATGTTCACAGGT
TGATACTGTACGGATTTTTTGGAATCGGTCATCGTGGATTCTTTCTTTTT
CGCGGTTATCCCGGGCCTCATGGCTCCCTTCAAGTAATTTTCTCAACTGT
GCGAAATTCTCGCGACCACGATAGTCTAGGGGCCGAGGGTGGGACTGCTG
GAACGATCTCATCCCTGTAAATTAGTCGATGTCAGGACGGAGCTATACAT
CGTTAACCTGTACGGTGTGCTGTGCCTCCAGCTCCACAAGTTGGACTGTG
TGTGGGTCCTCTGCGCTTGGGTTTTATGCGGGGGAAAACGAAACCTACCA
TGACAGTCACCAGCGCGTTGCGAGGAAATTAGAATAACGATGATGCTGTG
GCCAACACCACGATTACCCGAACGACCTTATTCCCAGGAAAAGCTCGTTG
TTCGTAGGGCTCATGTGTTTGCCTGGGTCTTGGGCAGTGAGCTGTCTGTG
GGGTGCAACTCCACACGAGCATTTGCAATTAAAAAGGCGGGCTGGACTGA
CTATCCGGTGCTGTCTGTGCTCGTCCCTGCCATAGAGCCATTCTTGAGGA
AGTACTGTACGTGTGTACCCTCTATTGACAATGCGTGGTGTCAAACGCTT
GCTGCATGCACAATTTTTCACCCCATCGAACGAGTAGGAGTACTTTCGGA
TGGTCGAGACAAAAATATGTGAAAAATATTTCGCCGGAAGGTTCAGCATG
AGCACGTTGATTTTACTCCTATCTGTTGCGTGTGTGAAATCAGCACGAGG
GCAAATCGACTGGAGTTGAAAATCACCATGAAGGGCAAGCTACGCACGCG
TCTTTGTCGATCGGGCGACCCATCCTGCCCGGCGATAACGTCGAATTTTA
TCCCCACGGAGGAGGAAATATATATGTGTACCCTGGACCCTCACCATGAT
CCACGACTGTGGCGAAGAGTATGAATATTGAAGACGAAAGAACAGGGGGT
GAATAATCCATTTATTTAACTTGCCTTGCACCTGCTAAAACTCAAACGAA
CACGTTTTCAACTCTTGTCTTGATAATTAGAAATATTCATATTCGTCCTT
GGAGTGCGAAGTTCCCGAGGTGAGTCTTGCAATTTTGCACCTGGGTAGGG
CTGAGCTGGCTGTGCCCCAGTGTCCCGCCTTGTCGTGACCGGTTGATGTC
TGGGAGACTTTGACCAACCACGAGCTCAAGTCACCCGTTATCGTTGAAAT
CTACACAAAGCTGCGGACGTTGGGGAAAAGGCGGTGTTAAAAAATAAAAA
AACTGAAATGAAGAAAGAAAGACACGAACAAACCTTGGATTTGCAGTTGT
TTGGCCGCAGACATGAAATGAACCATGAGCACATATGTGCTCACGCAACC
TCCGTTTCATGCCTGCGGCTTTACAACGTGCCGATCACACCCCTATTTAT
TGTTTTCGTTTTACGTTTCAGTTTGTTGAGAACAAGGTTATGTGTTGGAA
CAACGTGTGCAAATAAATGACGGCGAAAGCGAAAGTGAAAGTGAAAGTGA
AAAAGGCGGGGGGGGGGGGGGGGGGCGGAGTGACAATCGTAATTGTTCTA
CATATGCGTGCAGATCGTGAAATCGAAAACGTTTCAAGTCTGTACACAAT
TGTAGACCAATCACAGAAATTGCATGCGTGTGTACAGGAGATTTTTAGTT
GAGCAACTACTGCTCCTCCTAAGCCGCGAGTTTTACCATTGTCGCCACGG
TTACCCCAAGGTTGGATCTAGAGCAAAATGACAGGGAAAGTCGACCTGTT
TTTCTTATCCATTCCTCAACAAAAAGAAAGATCTGGTTGAACGTGACTAG
AATGGAAAGCTCGCAGGTTGGGAGCTGCAACAAGCGGACGAACGAGACTG
TCCTCTACGCACACACATGTGACCAATTTCCCACCAACCCCAATCCTTTT
GGTCCTTGAACTCCTGAAGTTTTGCGCCGCCGAAACCCAGCCTCTACAAG
AAAAAAATGCATCTCCAGGATGAGGAACAATCTCACTGTGGGGGAAAATA
TTTCTGGTATATTTTTATCGTCGCCTGTGACGGAAAAATGGAGGCACGAA
GTTTTTTCATGGTGACAAGCTTCTGATTTGTGTTTTGTACGAATCGATAG
AATATAAGTTTCGGGGATGATTGATTTTGTTGTTCAGATGTGGAGGGGAA
CAAAAGTTTTTTATAACCGGTTGACGTTTTCCACCGTGAACACAAAGTAG
CCCGCGCGAAACCGTCGATAAAATGAAAACATGGCCACCAGATGTCCGCA
GGGGCAACGCGATACCACCCACACAACCCCCCCCCTCTCTTTCCCCTCCT
GTACACTTGCTGCCCTCGCCATGTCTGCCGTGAATACACATGGCGTGTAC
TTGTCTTTCTGCAGTGAGTTTTCGTGCGGCGACCTTAGCGCGTTGGAACC
GGATGCGAAGGCAGTATGCTCCTCGGGCGGTATCCGCAGGCGCACCTTTG
CGGCATCCCAAACCAATGCTTTGTTGACAGGGGCATGGGAGCCCACGTCG
GGTGCCTATAGCCACGCAGAACAGCAACCATCCGCCCAGCCGATTTCGCA
CGCAGCTCAACAACAACAACCGCGGCACAATTCATCTTTGGCGGACCTTG
TAATGGGGGCAGGAATGGAATGCGAGACCACTTCAGCGGGAGGGGGGAGG
GGGGGGCACGAGAGTAGTGATTTAATGATTATACAACAGTCACAGCAGCA
GCAGGAGCATCACAAACCATCGTTGGTGTGTGGGGGGGGTTCGCCGAGTA
GCGGTGATCCTTCACAGAGATCATCTTCACCTGTTTTCTGCGGCCATGGC
GCGCAATTAGATAAAGTGCCGCCGGGTGTGGCTGTCGCCGCTTCCGCCGC
CGCCGTGGGCAGAGATGACGGGAATAGTAGCAGCACGCAGCCCCAGTTTA
ACGGGGTCTTGCGCGGAAAGAAGAGGAAGTCTCCGGGGATGGGGGGCGGA
GGCAAGCGGGCTCTTAATCCGGAGAGGATGGAACGCAAGGCGACGAGGGA
AAAACGCCGCCGAGAAGAGGTGGGAGCGTTTGTGTTTTCAATTTGATATC
AGTACGGTATGCTTGCATTCAATGTATGTCGACTCGTAGCGCGTCACGAT
ATGTATACATATCCCAAAAGTTCGCAGCTGGCAGTCGGTTTGGAAGAGGT
GGGGCAGGACGGGGGCGGGGGGATGCTGGCTAAATGTATGTGGTCATCAG
CGAAATTAGAACAGCTGAAAGGGTCTCGAGCTTGGTTACAAAATGGAAAA
CCACCTGATCCATTGTGCGTAGGGTTCCCCCCCCCCTCATGAAGGATGGT
AGTAACTCGTGTTTATTAATCGTTTATGTTTTGCTCCTCCTCAACGAATA
AAGTTGTGTTGTCGTCTTCTATGTAGCAGGCGTGTGTTTTCCTCCTCCGT
GCGAATACACTTCGACCTAATCGCCAGACCTGACGGTCCACCCGATCGAC
AAAGGCAAGTGCGCAGCTTACCCTTCATGTGGATTATCAATTTGTGGCGA
TTAGCTCTCACGCTGATTTCACACACACGAAACCACAAGCAACGGTCGGC
GCGCCTATTGCGCAAGGGCACCAGCAGCATTATGACACTACATATATATA
TATATATATATACCTGACAACGCAGCTAATAGGTAATTCATATCTCGTAT
CTATGCCGACGTTCTCGTCCCCAGAAAATATTTGTTGCGATGAACAGATT
GGAACGGGGGATGTTGTGATGATGGGTGTGCTGAGGGTCATAACTGAAAT
CTTCATGAATATATATACATATATATATATATATATATATATATATATAA
ATGTCACAGGTTCAAGCTGAAAGTCTTGTTGGGGAAAGTATTGTTCAAAG
GCCAGTATGTGCTCTTCCGCGCGATAGTCATGTTTTTTTTTTAATCTTCC
AGTTGCTGCTTGCCCCGATCTTCGGGGCAAGTTTACCTTAAGAGGGCGGG
AAGATACCATACACAGAACGTCCCCAGAAGGATGCAGGTGGAACAACACA
GGAAGATGGGTCCAAAACTCCGAAAGTGGCCAGACAAGAGCACCCGTAAA
GTTACCGATTGCGTTAATGATATGTGTAGTTGAGCAGTCATGTGCGATGT
GCCATCTGCTCCGAGTTTATGAGTGGTTCCGTTCCGGGGAATAGGTGCAG
ATCAAAGTAGAGCAGCGCCGAAAAGGTTCGGGCGAAACAAGAAGATACAA
GATCCGTGCCGCACGTACGAAGCGCCAAGAGTCCTCATTAATCCCTTCCC
GTCAAAGAAAGAAGATCCCAGTATCACATGAGAGAAAAATGTTCAAAAGG
TTTTGCTCCGATTTCGGAAAATCCTGTATTGGATACATGGGAGGACCATA
TAGGTCAAATATTCGTAAGTACAAGCCGAAAGGACTTGTCGTGTTGTCCT
GTTGAAGTTTATGTTCTCAACTGAAAGTCGACATACACTGGCGAAAAAGC
CGTATTCACTGTTGAAATAAAAATGGGGGCAACAGTATACGTTCGAGTGT
AAAATGCATGTCCCAGCATATTGGGGACAGGGGTGGTTTTGGCGATGGTC
CACCAAGAATGAGGTGTTCGAGACCCGCATACTTTGGAAAACCCCAGAGT
TGTCTACTGCGTGTATTGATCTATATAGTCCCGCATCGGGACAGACCATC
GCACTGATGTGTAATCCTGCTGCGTGACAAGTTTTGGATGTCGACCACGT
AGCACCGCTGAAAGTTCCTTTGAGACGAAAAACAAAACTGAATCCTGCGG
AGTTAGTTGGCTTGACGAGCCAGACTTCAAACTTTGGCGTATTTTTTTAC
GTGCTCCACAGAGATAGTAGTTACAGATGAAAAGGACATGTTGGAGATAC
TCGTAGGTTTGTGTGCCGCTTCCTTTTGTGGAGCTGATCTCGAAAACCAG
AGATTGTGTACCAGTGTCCCTCTGACAGCTTAACAAAAAGACCCGGAATC
TGAACTATGCATGGTGTGTGTATGAGCTGACGATTCGGAGGGAAATGTGT
TTTATGTACTTTTTAAATTTTATAGTTGGTACAGTATCTATCGCGACATG
TTTTTTGTACAATCAACGGGGCCCAATCGTGAGCATGATTGGATGAATGC
AGTTGCTATCCGTGTGGGCAGAGGGCGGCGTTAGTCACCAGGGCCATGAG
TTGCGTCGGAACCGATAGGTGCGAAGCGCCCGGGGAGTTCGCAGAAAGGC
GCGGGCCTGCCGTGAGGGAATTGTTTTGGAAATATCGGTATTTGGGGTCG
TTTTCGTTGATTTTATTCGCTTTCTTTCATCCCCCTACAGAAAATTACGC
CGAACGGAGATAATAACGGCCGCCTTCCTTTTTGGCTGGGAAGAGTGGAC
AGGAAACCGATCATTCTAATGTAAACTCGAGGCGGAAAAGACGTTTTTTG
CGAACAAAAATGGGCGTCAGGACCCAATACTTGATGCAATATATTGCCTT
GGATGCTATCTGTGTGGTCTGTTCCTCGTTTCGACTTGTCTTTTGGTCGG
CGCGAGCCTAATGAGTTTCGCTTGTTGTCCTGATCCAGTTCGGAAGGGTA
AATTTATTTGTTTGTCAAACCGCCCCTGCGCTGTGAGAAAGGTTTGATTC
AAGCACATGTAATCTTGATCTGGTCAATACCTACCACTTTTGGTGTTGCG
GTGAAGCGTTTTGCCTCTATAGAGCTTGTCTGTATTTGTACTTCCCTTCC
TCTCATCAAAGTGTCCTAAAAAGATGCACAACCCTGTGAACCCCATAATT
GTATATATTCCATATGCTACCCATTGGTACTGCACTGCGCCGATGCTCAA
GCGCGACCTATCTTCATTATAGCAATATGGTGGCGTGAGGCGTGTCGCGA
GAAGAGCTATTCTGTGTTGTACGTACTCGGGGATGGTGCCCCCGACTCGG
GAACCCCGAGGTTTTTTAGATGAGCTTCGCATGTTTGGCTTTGGTGTGCG
ATATCTCCACTGTGATAGTCCCCAGCTGGGCTACGATGTGGTTGACGGGG
TGCATTTTGTGACGAGCGCTTTGTTTATGGTAAAAAAATGATCATATGTC
CTCAGTCCTTAAGCCTGTATAGTAGTACTCCTGAGCAAATAAAAATGTTG
CTGAAGCATTTGCGCGTGGGGTCTTGGAAGCATCTGTGCGTCCTAAAAGC
AAATATAATGCGGCTATTCATGTGATTCGACAAATTAAGGGGCCGCTTTT
CATTCGCGTGAACGATATTGATGCATCCGCGATTTGTGTGGCTAACAAGG
TAATGTGTATGCATGATGCACAGGCCTTTATTGACGTGTGTAGGCACCTT
TCGTCCTATATTTTCCTCAATAATCCTCTCTGCGAATGTTAATTGCTGTC
GTTTATTTCAGCTGTTTTTTCTCAAGTTAGGGTTTGTCGAACTCTAACGT
TGAGCCGCTGGAGGGGATGGAATATGACCGATTCTATCAAAAACGCTCAA
AACGTGCCTCACTCCCTACCTCGTTGTCATGCGCGTGGATGTGGGCAAAC
GGGCAAATTGTACGTGTGAGATATGTGCATCATACCTAAATGTGCACAAA
TTGTGAAATTACTCAAAATGCTAGACTGGGAAAGAAAATGAGTGACTCCA
GATATGAGCAGGGCTGAAATGTGCGAAATGTGCGTAGAACACATGTGTAG
ATATCAAGGAATTGTGACCTACTTGTGTTAATGGCAGTACCGAATTCCCG
CGGCCGACTTATGGGCACCAAGTAACGTTTTCAAGCCAAACTGCCCCCAT
TGAGCACTTTTCTCCATCATCTCTCTCGAATACTTGCACTGAAACACCAG
GTGAACGAGAAGTTCGAGCAGCTGCTGACGGTGCTCGAGGAGGCCGAGGC
CACGTCGGGGCTGGAGCCGCCAGCACCCGAAGACGGACAGCACGCCAACG
CATGCATCAACGGCCGTCGCGTCGAAGTCCTCCACCGCACCATCTCCGTC
CTCCGCAAGCTCCTGCACGACAGACGTCAGCGCACGCATCACCTCGTGAA
TGCCCCAGCCCCCATCTGCTTCGAACAACCATCGTCGCTAAAAAAGCAAC
CGCCTAACCCTTCCCCCTCCCCCCCGTCTTTTTGTGACGGGCACGGGCAC
AATGCTATCGCGGCTGCCATCCCCCCGTCGGACGTGGCCACACCCCAACG
GCCCGCCGGTGGTGCCTCTTCCGAAGCTTCCCCGTCGGTGACTACCTCCG
GCCTCACTTCATCGCGATCTTCTGAGAGTATCACGCTTCCAGAGCCTACG
GCGCAAGGGCACGTGGTAGTGCCTGTACAACCCCCCCACGGCGGGCATCC
ACACGCGCACTCGACATCGATGCCCGTGCCAACTGGGTTCGCGATGGCAT
ACCATCCTGGCATGCCAATGCCGCCGGGTGCGGTCAGTATACCCGCCGGC
GCCACGGGGCACATGGCTGCTGCTGCGGCGGCGGGCGTGACCGGCATGCA
CCCGAACATGCAGGGTCGCCACGCCCAGCCATTCTTCATCGCCGTGCCCA
TGTTCATGCCCCCCGGGCAGGGGATGGGAGGGACAGGATCGGCGGCTTCT
GCTGAAGCTTCCGGGGAAAGTGCTCCGCCGGTGGCGCCCGTGGCCCCTAT
GCCGGCCGTCCCGTCGCCGGTGCCGCCGCCAGCGGCGGCTGTGACGGTGG
CTGCCCAGCCGTCGGCAGCCTCTACCTCGATATTGGCGGCGGATGAGAAG
TCTCCCTGCGAGGGCAAGGCTGGTTTTGTTGGGGCGCTGACACCGATGGC
TGGAGTGCCCGACGTATCTACAAATGTAACTTTGGGCAAGCCATCGTGGC
CTATGCCCGGCGGGGTGGGGTTTCCGCCGATGATGTTGCAGATGCCGCAG
TTTGTCACGCAAGCTCTTACAGCGCAGGATGGAGACGAGAAGGTCACTCA
TGCGATGTGCGCGTAGTGTGTGGGAGTCGTGTGGGTGGCATTTTTTTCTG
ATCAGTTTGCAATCGAGGATTAATTTAATTAAAGAGGTCGATTGTGTGAG
AGAATTTGGGAAACCTGATGGAGAGGGCGAGGGCGAGCGTATTTGGATTC
TGTAGCACCAGCGTTCCCACCAAAACGTTACTCCAGGGTATCCCACATTG
GGAATATGAACGTTTGCGATATACATTTTTTAGACATGAGCATATACGTG
TTTTGTGTTATTCAACCTTGGGATTTGACACTTTTACCGGGGAGTACTTC
CGTCGGGTGTTGGGGTCGTTTCCCCCGGAGTAGTTGGAGTCTGACCTCGT
TCGGGACATGAAAGGAATGAGGAGAGGCGCACCGTCATGAAGGGATGGGG
AACAGTCCTGTCGTGATAACTTGCATAATAAATAGCACGAGGTTGCGTCC
AAGCTCTCCATGCTGCTGCCATTGATTTTCCTTCCATGGTGGTTGCTATC
CAATGTACTGTAGCATTTCACGGTTCTTGTTTGCATGGGCCAGCAGGAAG
ATCTGACCACCCGTGCATTGGGTGAGTTACCAGGTAGGGATATTTCTCCT
GCGCTATTTTTTGGGGGGTTGATGTGGCAAGTTGCATGTTTATATATATA
TATATATATATATATATATATATGATTTTTTTTTCTGTCGTTGGTATTGT
ATGCTGGTGGTTCCCCCGCACGGCGGGGGGAAAGGGGCAGGGAAACATAG
ACTGAGACCGTGCGCGGTGTATCTATCTATCTGCGTGTCTTGCTTTTTTC
ACCGATTTATTGCTCAATCAAGGAAAATACACTATTTATTACAAGGGCCC
AACAACACCAGTCGTGGAGAGCTAATATGCCTGTGATAGTAAGCAAAGAA
ATCGGGATAGAGTCGAGGGTTGTAGCGGTTTCGGTTCATGTGATCATTTT
TGTAGGCAGGATTATTTAGTTTAGCCTCAACATCGACCCGTTTCGTCATG
GCCTTCGTTTTTCCGCTCTTCATATAAGTAGTAGTTTTATTGATATGCAT
GTACTAGAGTGTTGAATTTTCTGGAGTGCATCGTACATCCATCTGATCGT
ACATGCATTGCGTACAACATCGCAATGATCAATGAACTGCTTTTTATATT
GTGTGTGGAATCTGAAAAATATTCTCCAGTAGGAGTTTTGTCCGTAGAGT
ATACTGATTGGAAATAAAACACTCACTTTCCTACGATGAAGGCGCGGAAT
ATATGGTCGATGGGAATGCCCCCCTTCTTGTGCCGTCGTTTTCGCAGGAT
GCGGACGTTGAGCTGTATATTTGCTGGATTGGACTCGATGTGAAGTTGCT
GCGGTATTGTCGTATCTGCTACTCTAATAGAAGCGAAGCAATCTGATCTG
ACTCATTCGCTTTCACAGTTGGAGTCTGATTGGTGGCACGCAAACGATAA
TTAAACGCAGGTAGTAATTATCGTTTGCGCATTTATGATATAACAGCCGA
TCATCCTATTTGAGGATCGATCTTGTTATTGAGGATAATATAGCTTTTGG
TCATCCGAAAAAGTATTATTGCTGAATCATGCTAAGCGGTCCAAGGCTGC
GCGAAAGCGGATAACGTCAGCATTCA back to topCoding sequence (CDS) from alignment at H-paniculata_contig6118:652..13027+ >mRNA_H-paniculata_contig6118.13823.1 ID=mRNA_H-paniculata_contig6118.13823.1|Name=mRNA_H-paniculata_contig6118.13823.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3834bp|location=Sequence derived from alignment at H-paniculata_contig6118:652..13027+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTGATTCTGCATGCGTTACTATCGGGGGTCAGTCGGAGCAGGCATT
GGGAATTGGCGAGGACGATGGCCGCCAAAGTGATGTGGAGCACGCAGACT
TCGACGAGTTGCTGCAGTCGAACGTGTTAGATACCCTGGCGGACTTATGG
CTGATTCTGCATGCGTTACTATCGGGGGTCAGTCGGAGCAGGCATTGGGA
ATTGGCGAGGACGATGGCCGCCAAAGTGATGTGGAGCACGCAGACTTCGA
CGAGTTGCTGCAGTCGAACGTGTTAGATACCCTGGCGGACTTTGAGTTTT
CGTGCGGCGACCTTAGCGCGTTGGAACCGGATGCGAAGGCAGTATGCTCC
TCGGGCGGTATCCGCAGGCGCACCTTTGCGGCATCCCAAACCAATGCTTT
GTTGACAGGGGCATGGGAGCCCACGTCGGGTGCCTATAGCCACGCAGAAC
AGCAACCATCCGCCCAGCCGATTTCGCACGCAGCTCAACAACAACAACCG
CGGCACAATTCATCTTTGGCGGACCTTGTAATGGGGGCAGGAATGGAATG
CGAGACCACTTCAGCGGGAGGGGGGAGGGGGGGGCACGAGAGTAGTGATT
TAATGATTATACAACAGTCACAGCAGCAGCAGGAGCATCACAAACCATCG
TTGGTGTGTGGGGGGGGTTCGCCGAGTAGCGGTGATCCTTCACAGAGATC
ATCTTCACCTGTTTTCTGCGGCCATGGCGCGCAATTAGATAAAGTGCCGC
CGGGTGTGGCTGTCGCCGCTTCCGCCGCCGCCGTGGGCAGAGATGACGGG
AATAGTAGCAGCACGCAGCCCCAGTTTAACGGGGTCTTGCGCGGAAAGAA
GAGGAAGTCTCCGGGGATGGGGGGCGGAGGCAAGCGGGCTCTTAATCCGG
AGAGGATGGAACGCAAGGCGACGAGGGAAAAACGCCGCCGAGAAGAGTGA
GTTTTCGTGCGGCGACCTTAGCGCGTTGGAACCGGATGCGAAGGCAGTAT
GCTCCTCGGGCGGTATCCGCAGGCGCACCTTTGCGGCATCCCAAACCAAT
GCTTTGTTGACAGGGGCATGGGAGCCCACGTCGGGTGCCTATAGCCACGC
AGAACAGCAACCATCCGCCCAGCCGATTTCGCACGCAGCTCAACAACAAC
AACCGCGGCACAATTCATCTTTGGCGGACCTTGTAATGGGGGCAGGAATG
GAATGCGAGACCACTTCAGCGGGAGGGGGGAGGGGGGGGCACGAGAGTAG
TGATTTAATGATTATACAACAGTCACAGCAGCAGCAGGAGCATCACAAAC
CATCGTTGGTGTGTGGGGGGGGTTCGCCGAGTAGCGGTGATCCTTCACAG
AGATCATCTTCACCTGTTTTCTGCGGCCATGGCGCGCAATTAGATAAAGT
GCCGCCGGGTGTGGCTGTCGCCGCTTCCGCCGCCGCCGTGGGCAGAGATG
ACGGGAATAGTAGCAGCACGCAGCCCCAGTTTAACGGGGTCTTGCGCGGA
AAGAAGAGGAAGTCTCCGGGGATGGGGGGCGGAGGCAAGCGGGCTCTTAA
TCCGGAGAGGATGGAACGCAAGGCGACGAGGGAAAAACGCCGCCGAGAAG
AGGTGAACGAGAAGTTCGAGCAGCTGCTGACGGTGCTCGAGGAGGCCGAG
GCCACGTCGGGGCTGGAGCCGCCAGCACCCGAAGACGGACAGCACGCCAA
CGCATGCATCAACGGCCGTCGCGTCGAAGTCCTCCACCGCACCATCTCCG
TCCTCCGCAAGCTCCTGCACGACAGACGTCAGCGCACGCATCACCTCGTG
AATGCCCCAGCCCCCATCTGCTTCGAACAACCATCGTCGCTAAAAAAGCA
ACCGCCTAACCCTTCCCCCTCCCCCCCGTCTTTTTGTGACGGGCACGGGC
ACAATGCTATCGCGGCTGCCATCCCCCCGTCGGACGTGGCCACACCCCAA
CGGCCCGCCGGTGGTGCCTCTTCCGAAGCTTCCCCGTCGGTGACTACCTC
CGGCCTCACTTCATCGCGATCTTCTGAGAGTATCACGCTTCCAGAGCCTA
CGGCGCAAGGGCACGTGGTAGTGCCTGTACAACCCCCCCACGGCGGGCAT
CCACACGCGCACTCGACATCGATGCCCGTGCCAACTGGGTTCGCGATGGC
ATACCATCCTGGCATGCCAATGCCGCCGGGTGCGGTCAGTATACCCGCCG
GCGCCACGGGGCACATGGCTGCTGCTGCGGCGGCGGGCGTGACCGGCATG
CACCCGAACATGCAGGGTCGCCACGCCCAGCCATTCTTCATCGCCGTGCC
CATGTTCATGCCCCCCGGGCAGGGGATGGGAGGGACAGGATCGGCGGCTT
CTGCTGAAGCTTCCGGGGAAAGTGCTCCGCCGGTGGCGCCCGTGGCCCCT
ATGCCGGCCGTCCCGTCGCCGGTGCCGCCGCCAGCGGCGGCTGTGACGGT
GGCTGCCCAGCCGTCGGCAGCCTCTACCTCGATATTGGCGGCGGATGAGA
AGTCTCCCTGCGAGGGCAAGGCTGGTTTTGTTGGGGCGCTGACACCGATG
GCTGGAGTGCCCGACGTATCTACAAATGTAACTTTGGGCAAGCCATCGTG
GCCTATGCCCGGCGGGGTGGGGTTTCCGCCGATGATGTTGCAGATGCCGC
AGTTTGTCACGCAAGCTCTTACAGCGCAGGATGGAGACGAGAAGGTCACT
CATGCGATGTGCGCGTAGGTGAACGAGAAGTTCGAGCAGCTGCTGACGGT
GCTCGAGGAGGCCGAGGCCACGTCGGGGCTGGAGCCGCCAGCACCCGAAG
ACGGACAGCACGCCAACGCATGCATCAACGGCCGTCGCGTCGAAGTCCTC
CACCGCACCATCTCCGTCCTCCGCAAGCTCCTGCACGACAGACGTCAGCG
CACGCATCACCTCGTGAATGCCCCAGCCCCCATCTGCTTCGAACAACCAT
CGTCGCTAAAAAAGCAACCGCCTAACCCTTCCCCCTCCCCCCCGTCTTTT
TGTGACGGGCACGGGCACAATGCTATCGCGGCTGCCATCCCCCCGTCGGA
CGTGGCCACACCCCAACGGCCCGCCGGTGGTGCCTCTTCCGAAGCTTCCC
CGTCGGTGACTACCTCCGGCCTCACTTCATCGCGATCTTCTGAGAGTATC
ACGCTTCCAGAGCCTACGGCGCAAGGGCACGTGGTAGTGCCTGTACAACC
CCCCCACGGCGGGCATCCACACGCGCACTCGACATCGATGCCCGTGCCAA
CTGGGTTCGCGATGGCATACCATCCTGGCATGCCAATGCCGCCGGGTGCG
GTCAGTATACCCGCCGGCGCCACGGGGCACATGGCTGCTGCTGCGGCGGC
GGGCGTGACCGGCATGCACCCGAACATGCAGGGTCGCCACGCCCAGCCAT
TCTTCATCGCCGTGCCCATGTTCATGCCCCCCGGGCAGGGGATGGGAGGG
ACAGGATCGGCGGCTTCTGCTGAAGCTTCCGGGGAAAGTGCTCCGCCGGT
GGCGCCCGTGGCCCCTATGCCGGCCGTCCCGTCGCCGGTGCCGCCGCCAG
CGGCGGCTGTGACGGTGGCTGCCCAGCCGTCGGCAGCCTCTACCTCGATA
TTGGCGGCGGATGAGAAGTCTCCCTGCGAGGGCAAGGCTGGTTTTGTTGG
GGCGCTGACACCGATGGCTGGAGTGCCCGACGTATCTACAAATGTAACTT
TGGGCAAGCCATCGTGGCCTATGCCCGGCGGGGTGGGGTTTCCGCCGATG
ATGTTGCAGATGCCGCAGTTTGTCACGCAAGCTCTTACAGCGCAGGATGG
AGACGAGAAGGTCACTCATGCGATGTGCGCGTAG back to top
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