prot_H-paniculata_contig61110.13818.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig61110.13818.1
Unique Nameprot_H-paniculata_contig61110.13818.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length90
Homology
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE)

HSP 1 Score: 116 bits (290), Expect = 2.850e-28
Identity = 52/90 (57.78%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 CLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHWCGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAVN 90
            C+V+VDD+V W E E +LL  LDL+L R    GLF AAHK  FYTT+V WCGK+YS   ++HD +R+ GL  +RRPE  G+LM+FLQAVN
Sbjct:  808 CIVWVDDIVYWGETEEDLLNTLDLILARFEHHGLFVAAHKCTFYTTSVKWCGKVYSKGVIEHDRDRLSGLANLRRPETAGELMQFLQAVN 897          
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE)

HSP 1 Score: 112 bits (281), Expect = 4.610e-27
Identity = 51/90 (56.67%), Postives = 66/90 (73.33%), Query Frame = 0
Query:    1 CLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHWCGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAVN 90
            C+V+VDDVV W  DE +L   LD +L RL + G+FAAAH  +F+ T + WCGK+YSG  V HDP R++GL +MRRPE  G+LM+ LQAVN
Sbjct:  618 CMVWVDDVVWWGIDETDLPNALDEILRRLEDKGIFAAAHMCLFFDTKIKWCGKVYSGGQVAHDPARLQGLADMRRPETAGELMQVLQAVN 707          
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Match: A0A2P4WWJ1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WWJ1_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 1.330e-17
Identity = 44/89 (49.44%), Postives = 59/89 (66.29%), Query Frame = 0
Query:    2 LVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHWCGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAVN 90
            LV++DD++ +AE E ELL+ LD VL R    GL   A K  F+   V WCGK+ S  GV+H P+R++GLVEM+  +  GDL +FL AVN
Sbjct:  609 LVWLDDILGYAESEEELLQLLDQVLARCEAYGLKLHAKKCDFFEIEVKWCGKMVSAAGVRHYPDRVQGLVEMQPSQTAGDLQQFLCAVN 697          
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Match: A0A0G4J2M7_PLABS (Reverse transcriptase domain-containing protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4J2M7_PLABS)

HSP 1 Score: 80.1 bits (196), Expect = 1.910e-16
Identity = 40/88 (45.45%), Postives = 54/88 (61.36%), Query Frame = 0
Query:    2 LVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHWCGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAV 89
            +V++DD++ +A+ E ELL  L  V ER  EVGL     K   +   + WCGKIYSG G++HDPERI  L  M  P+ V DL + + AV
Sbjct:   13 MVWIDDLLGFAKTEAELLELLANVFERAREVGLKFNPTKCTIFARELVWCGKIYSGNGIRHDPERIAALTSMPEPKTVKDLQQLMWAV 100          
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Match: A0A6A3YFR7_9STRA (Reverse transcriptase domain-containing protein n=1 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A3YFR7_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 2.250e-16
Identity = 39/89 (43.82%), Postives = 55/89 (61.80%), Query Frame = 0
Query:    2 LVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHWCGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAVN 90
            L+++DD++L+AED    L +L  +   + E GL  +A K+  +  +V WCGKI  G GV+HDP+RI  L EM  P   GDL +FL A N
Sbjct:   14 LIWIDDLLLYAEDVDTYLEKLGELFSLMNEFGLKLSAAKSSLFQRSVKWCGKIIDGDGVRHDPQRIAALREMPLPSTAGDLQQFLCACN 102          
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Match: H3H7W2_PHYRM (Uncharacterized protein n=2 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H7W2_PHYRM)

HSP 1 Score: 82.0 bits (201), Expect = 2.990e-16
Identity = 41/89 (46.07%), Postives = 58/89 (65.17%), Query Frame = 0
Query:    2 LVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHWCGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAVN 90
            L  + D++ +AED+  LL  LD VLER  + GL   A K  F++  + WCG++ SG GV+H P+RI GLV+M+ P   G+L +FL AVN
Sbjct:  258 LALLADILGFAEDDDALLDVLDTVLERCEKFGLKLHAKKCQFFSREIKWCGRMISGDGVRHCPDRIHGLVDMQMPTTAGELQQFLCAVN 346          
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Match: A0A6A3H6H7_9STRA (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A3H6H7_9STRA)

HSP 1 Score: 81.6 bits (200), Expect = 3.750e-16
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0
Query:    2 LVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHWCGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAVN 90
            L+++DD++L+AED    L +L  +   + E GL  +A K+  +  +V WCGKI  G GV+HDP+RI  L EMR P   GDL +FL A N
Sbjct:  345 LIWIDDLLLYAEDVDTYLEKLGELFSLMNEFGLKLSAAKSSLFQRSVKWCGKIIDGDGVRHDPQRIAALREMRLPSTAGDLQQFLCAGN 433          
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Match: A0A6G0JSB0_9STRA (Reverse transcriptase domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0JSB0_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.910e-15
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    2 LVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHWCGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAVN 90
            LV++DD++L+A D    L +LD + E L   G   +  K+  Y   V WCGKI SG GV HDPERI+ L  +  P N G+L +FL A N
Sbjct:  330 LVWIDDLMLYATDVQTYLIKLDRLFELLDFFGFMLSVTKSSLYEPQVKWCGKIISGRGVSHDPERIKALARLPYPSNAGELQQFLCAGN 418          
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Match: A0A6G0MKE3_9STRA (Uncharacterized protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6G0MKE3_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 4.970e-15
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 0
Query:    2 LVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHWCGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAVN 90
            LV++DD++L+A D    L +LD + E L   G   +  K+  Y   V WCGKI SG GV HDPERI+ L  +  P N G+L +FL A N
Sbjct:  330 LVWIDDLMLYATDVQTYLIKLDRLFELLDFFGFMLSVTKSSLYEPQVKWCGKIISGRGVSHDPERIKALARLPYPSNAGELQQFLCAGN 418          
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Match: A0A6G0WUU6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WUU6_9STRA)

HSP 1 Score: 77.0 bits (188), Expect = 1.720e-14
Identity = 38/89 (42.70%), Postives = 54/89 (60.67%), Query Frame = 0
Query:    2 LVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHWCGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAVN 90
            LV++DD++++A+   +L+   + VL    E GL     K  F+ T + WCGK+ SG+GV+HDP RI  L  M  P    DLM+FL AVN
Sbjct:  213 LVWIDDLLVYAKTHSDLMNCFEEVLSICSETGLKLNPDKCEFFATELKWCGKLVSGSGVRHDPGRIAALQSMSLPRTGADLMQFLCAVN 301          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig61110.13818.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L7F6_9PHAE2.850e-2857.78Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K9E0_9PHAE4.610e-2756.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2P4WWJ1_9STRA1.330e-1749.44Uncharacterized protein n=1 Tax=Phytophthora palmi... [more]
A0A0G4J2M7_PLABS1.910e-1645.45Reverse transcriptase domain-containing protein n=... [more]
A0A6A3YFR7_9STRA2.250e-1643.82Reverse transcriptase domain-containing protein n=... [more]
H3H7W2_PHYRM2.990e-1646.07Uncharacterized protein n=2 Tax=Phytophthora ramor... [more]
A0A6A3H6H7_9STRA3.750e-1644.94Reverse transcriptase domain-containing protein (F... [more]
A0A6G0JSB0_9STRA4.910e-1544.94Reverse transcriptase domain-containing protein n=... [more]
A0A6G0MKE3_9STRA4.970e-1544.94Uncharacterized protein n=3 Tax=Phytophthora fraga... [more]
A0A6G0WUU6_9STRA1.720e-1442.70Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.70.270coord: 1..60
e-value: 4.0E-9
score: 38.3
NoneNo IPR availablePANTHERPTHR24559:SF222coord: 3..86
NoneNo IPR availablePANTHERPTHR24559FAMILY NOT NAMEDcoord: 3..86
NoneNo IPR availableSUPERFAMILY56672DNA/RNA polymerasescoord: 1..86
IPR000477Reverse transcriptase domainPROSITEPS50878RT_POLcoord: 1..55
score: 9.593

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig61110contigH-paniculata_contig61110:3..272 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig61110.13818.1mRNA_H-paniculata_contig61110.13818.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig61110 3..272 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig61110.13818.1 ID=prot_H-paniculata_contig61110.13818.1|Name=mRNA_H-paniculata_contig61110.13818.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=90bp
CLVYVDDVVLWAEDEGELLRRLDLVLERLMEVGLFAAAHKAVFYTTTVHW
CGKIYSGTGVKHDPERIRGLVEMRRPENVGDLMRFLQAVN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000477RT_dom