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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Model size | 405 |
| Cds size | 378 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig6111.13817.1 >prot_H-paniculata_contig6111.13817.1 ID=prot_H-paniculata_contig6111.13817.1|Name=mRNA_H-paniculata_contig6111.13817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=126bp
MAFQGIGGVVPRGGPGGHMSMGNGGGIRGMDMGMNMRGNMVMDMRMMGAG
NGQMGGGFVSGAYGMHRMGMGEPPGMGMGAMIAGMGPGQYPGGMGYGYGP
AMNGMMPGQGQGQQQQQQHGADTGEG back to topmRNA from alignment at H-paniculata_contig6111:2023..4735+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig6111.13817.1 ID=mRNA_H-paniculata_contig6111.13817.1|Name=mRNA_H-paniculata_contig6111.13817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2713bp|location=Sequence derived from alignment at H-paniculata_contig6111:2023..4735+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTAGGGAAGGCGGACCGTTCCCAGGAATGGCGTTCCAAGGAATCGGAGGC
GTGGTTCCCAGGGGCGGGCCAGGGGGACACATGAGCATGGGAAACGGCGG
CGGGATCAGGGGAATGGACATGGGGATGAATATGCGGGGTAATATGGTTA
TGGATATGAGGATGATGGGAGCGGGGAATGGACAGATGGGCGGCGGGTTT
GTTTCTGGAGCCTACGGCATGCATCGGATGGGGATGGGGGAGCCACCAGG
CATGGGGATGGGCGCCATGATTGCTGGAATGGGTCCAGGTAAGAACTGTA
CAGGGGGTGTCGGGTATGGTGATATGTGGTGGTGTGGTTTGTTGGTTCGT
TTTTTGAAGAGCACAAAGTAGTACTTGAAACCCTTGAAGATATTGTGACA
TCTCTGAGTAGGTGTGGAATAATAGTTTATTGTTTGGGCGTTACCGGAAA
AAGGCGGCGCTTGTTCGTTCTTGCTCTACACTAATAAATCCAAAAGATAA
ATGTCTTCCCCCTCCCCCCCCAAAAAAAATGAACTTCTTGTTGCATCTGA
AATGCACTTAACCAACGGTCTCGAGCTGGTCTGTTGTTTGTTGAGGCATC
GTGTTGACATATTTGATCATTATTGACGACTGGTCGCTGGTAAGTCCACC
TTTTGGCCGCTACAATGTCCGGCCCCAAAGGTTTGGTGTTCGTTTTCTCC
AGCTTGATAAATTTGTTCAAAAAGCAAAAAGATCAGAAGTAGGCGGTGTT
CTTGGCAATGTACCCAGTTGAGTCTACATCCTCTGATTAAACACGCCGCT
GTCGCCCCCACCTCCCTTCCTCGTCGAGAATGGTTGACTTATTGTTTTAT
GTAGCACGCCTGGCATCGCTCGAACAAGATGTAAATGCGCGTGACGTTGT
AAATAGGGGCCCGGTGGCGCCAAGATATGGATCATGGCTATGCGTGTTGG
AGGTACGATGAAATGCGATGTGCGTTCGTTCTGTGTGGCCTGATTTTTTC
TTTCAATTTTCAAAAGGTGCCGTAAGAAGTGGTTCAAAGAAAAATTTGAT
GCGATTTTTTCACAGTTTGATTTTGTGCAAAAATCTATTTTTCAAACGCA
ACACTCGAACGCCCATAGGAATCGGTCTATATATCGATTATTTTCCGTCA
ACGATGGGCCCCCCCGTCCACTCCCGCCCTCAGGACGGCTGCCGTCACGT
CTTCCTCAGACCGCCCGCTCCCTGTCATTTTTTTTCATAGCGTGCCATAC
GCGTTCTGCACATTGATATGTCCATGAACTTGCTGGGAACCCATCACGTC
CTGTTCGCTGTGCACATATATATTTTTTTTGGGGCCATTAAGAACAAAGC
CGGTGTATACCCGTGTTCTCACTCTACACGGATAATAAATCCCCGCCCAA
AAGCCCTCCAAAAGCCCCCCAAACACCAAAAAAAACGAACCCATTTTGCA
TCTGAGATGCATTCATCCGCTCTTTAGAGCTGGTCAAGGATTTTGTCGGT
GTATTCGTCATTATCCAGAATTGGTTATGAGCAGAAAATATGTAATTTGG
TCGTTACGGTGTCTGTTTCATAAAGGTGGGCTTCTCCCCCATGCGCTATA
AAATCGGATGCAAATATACGTGTGTTTCTCGTGGGCATATGTTCGAAAAG
CGAAAAGACGCGTCAATTTATGCGAATTTCTGAGAAATGTGTCAATGATT
CGCGTGCAAAACGTTAAAATACACACCATTTATTCGACTCAACCGCATAA
AAGGTGCGATTATAGTATATGTACGACTGACGACGAAATATGCGCAACAT
ATTCGTCATACACATATTTTCTTCAAGCAAATCCGTTGTAAAGGTCTAAG
GTGGATTTGTATGCGCATATACTACATGCCGTAGATCTCCAGGTACTAGC
ATTCTGGTATTTATATTTATATTTTTTTGCCAATGTGTGCTTTGTCTTCC
AATATGTGCTGGATTGGACCTGGCGATTAACGGACAGTCGACAACGATTA
GAGCAACATGGCAGATCCGAGAGATTCGCTACTTTGCTACAAGAAGGCGA
TGGATAGCGCCTTACTGTATGACAAGATGACAAGCCGCATGAAAAAGACG
AACAAAGGTCATACTCCAATGAATCAGCACCCTTGAACATACGCGTAGAT
ATGCGCAACAATCTGAATAATTCTCGTATACTATAACACTATTGATATCG
CACCCCCTGATGTTATTTTTCAAACTCAATTTCGTCGAGAAGCAAGACCC
TGTACTGCCGCCAAAACAACAGATGTATCGAAAGATCTCAGCGAGGAATA
TGTGCAAAATATAGAAAATCTGCGGAGTATGTGCAAAATATAGAAAATCT
GCGGAATATGTGCAAAATATATATAGTATGTCGAGCCGAAAGAAGCCTAC
GAAAAGGGTTCAAATCGAGAATTGTATAGAAGCACGTTGTCCAACCCAAC
TCTGTATATATATATATATATCTCTCTCTAAAGATATATATACAAACATC
CATGTGAATATCTGAGAAGTGTGCTAAGGTCCCTTACTCGTCCTCTCTCC
CTATGTTCCCGTTGGCACGTGTGTAAAACATATTATATCCATGGTAGGAC
AATATCCTGGTGGTATGGGCTACGGCTACGGCCCCGCCATGAACGGCATG
ATGCCTGGGCAAGGACAGGGACAGCAGCAGCAACAACAGCATGGGGCGGA
CACTGGAGAAGGG back to topCoding sequence (CDS) from alignment at H-paniculata_contig6111:2023..4735+ >mRNA_H-paniculata_contig6111.13817.1 ID=mRNA_H-paniculata_contig6111.13817.1|Name=mRNA_H-paniculata_contig6111.13817.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=756bp|location=Sequence derived from alignment at H-paniculata_contig6111:2023..4735+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGTTCCAAGGAATCGGAGGCGTGGTTCCCAGGGGCGGGCCAGGGGG
ACACATGAGCATGGGAAACGGCGGCGGGATCAGGGGAATGGACATGGGGA
TGAATATGCGGGGTAATATGGTTATGGATATGAGGATGATGGGAGCGGGG
AATGGACAGATGGGCGGCGGGTTTGTTTCTGGAGCCTACGGCATGCATCG
GATGGGGATGGGGGAGCCACCAGGCATGGGGATGGGCGCCATGATTGCTG
GAATGGGTCCAGATGGCGTTCCAAGGAATCGGAGGCGTGGTTCCCAGGGG
CGGGCCAGGGGGACACATGAGCATGGGAAACGGCGGCGGGATCAGGGGAA
TGGACATGGGGATGAATATGCGGGGTAATATGGTTATGGATATGAGGATG
ATGGGAGCGGGGAATGGACAGATGGGCGGCGGGTTTGTTTCTGGAGCCTA
CGGCATGCATCGGATGGGGATGGGGGAGCCACCAGGCATGGGGATGGGCG
CCATGATTGCTGGAATGGGTCCAGGACAATATCCTGGTGGTATGGGCTAC
GGCTACGGCCCCGCCATGAACGGCATGATGCCTGGGCAAGGACAGGGACA
GCAGCAGCAACAACAGCATGGGGCGGACACTGGAGAAGGGGACAATATCC
TGGTGGTATGGGCTACGGCTACGGCCCCGCCATGAACGGCATGATGCCTG
GGCAAGGACAGGGACAGCAGCAGCAACAACAGCATGGGGCGGACACTGGA
GAAGGG back to top
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